FFCP PHASE1:Mm9::chr16:5885062..5885141,+: Difference between revisions
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{{FFCP|EntrezGene=268859|HGNC=|MCL_coexpression_id=1|UniProt=Q9JJ43|association_with_transcript=176bp_to_NM_021477,uc007ycb.2,uc007ycc.2,uc012abb.1_5end|description=CAGE_peak_5_at_Rbfox1_5end|id=chr16:5885062..5885141,+|ontology_enrichment_celltype=CL:0000117!1.96e-12!23;CL:0000337!1.96e-12!23;CL:0000540!1.44e-11!33;CL:0000047!1.44e-11!33;CL:0000031!1.44e-11!33;CL:0000404!1.44e-11!33;CL:0000393!5.43e-08!39;CL:0000211!5.43e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,5.46e-18,23;CL:0000337,5.46e-18,23;CL:0000540,2.14e-11,33;CL:0000047,2.14e-11,33;CL:0000031,2.14e-11,33;CL:0000404,2.14e-11,33;CL:0000393,1.28e-08,39;CL:0000211,1.28e-08,39;CL:0002319,3.12e-07,43;CL:0000221,6.26e-07,44;CL:0000133,6.26e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.36e-22!71;UBERON:0003075!1.36e-22!71;UBERON:0007284!1.36e-22!71;UBERON:0001017!2.65e-22!73;UBERON:0005743!2.65e-22!73;UBERON:0001049!3.85e-21!52;UBERON:0005068!3.85e-21!52;UBERON:0006241!3.85e-21!52;UBERON:0007135!3.85e-21!52;UBERON:0000073!5.55e-21!75;UBERON:0001016!5.55e-21!75;UBERON:0000955!2.77e-20!50;UBERON:0006238!2.77e-20!50;UBERON:0000033!4.78e-20!63;UBERON:0002616!1.65e-19!49;UBERON:0002020!8.96e-19!34;UBERON:0004121!2.23e-18!102;UBERON:0000924!2.23e-18!102;UBERON:0006601!2.23e-18!102;UBERON:0003056!3.78e-17!49;UBERON:0003080!2.39e-16!40;UBERON:0002791!6.31e-16!29;UBERON:0003528!6.31e-16!29;UBERON:0001893!6.31e-16!29;UBERON:0002780!1.15e-15!39;UBERON:0001890!1.15e-15!39;UBERON:0006240!1.15e-15!39;UBERON:0000956!3.33e-12!21;UBERON:0001869!3.33e-12!21;UBERON:0000203!3.33e-12!21;UBERON:0007811!8.80e-10!86;UBERON:0002619!1.50e-09!17;UBERON:0002021!3.33e-09!10;UBERON:0000411!3.33e-09!10;UBERON:0001950!3.33e-09!10;UBERON:0000153!1.12e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.04e-29,54;UBERON:0002020,1.85e-28,34;UBERON:0001049,9.64e-28,52;UBERON:0005068,9.64e-28,52;UBERON:0006241,9.64e-28,52;UBERON:0007135,9.64e-28,52;UBERON:0001017,1.28e-25,73;UBERON:0001016,1.64e-24,75;UBERON:0003528,3.96e-24,29;UBERON:0002791,3.96e-24,29;UBERON:0001893,3.96e-24,29;UBERON:0000955,1.41e-23,47;UBERON:0006238,1.41e-23,47;UBERON:0002346,2.87e-23,64;UBERON:0003075,2.87e-23,64;UBERON:0007284,2.87e-23,64;UBERON:0002616,1.77e-22,46;UBERON:0003080,6.44e-20,40;UBERON:0002780,6.14e-19,39;UBERON:0001890,6.14e-19,39;UBERON:0006240,6.14e-19,39;UBERON:0010371,1.19e-18,73;UBERON:0000956,1.70e-18,21;UBERON:0001869,1.70e-18,21;UBERON:0000203,1.70e-18,21;UBERON:0004121,8.38e-18,95;UBERON:0000924,8.38e-18,95;UBERON:0006601,8.38e-18,95;UBERON:0003056,1.67e-16,49;UBERON:0002619,1.87e-14,17;UBERON:0010314,2.16e-13,92;UBERON:0002021,4.16e-13,10;UBERON:0000411,4.16e-13,10;UBERON:0001950,4.16e-13,10;UBERON:0003076,2.65e-08,12;UBERON:0003057,2.65e-08,12;UBERON:0002420,8.96e-07,8;UBERON:0007245,8.96e-07,8;UBERON:0010009,8.96e-07,8;UBERON:0010011,8.96e-07,8;UBERON:0000454,8.96e-07,8|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02316460859598,2.64495489636016,5.07065122804943,0,0,0,0,0.7104801149461,0,0,6.0139975138917,9.18040380655497,6.94072372459561,3.71346279724945,4.41737081903227,2.9397791811589,3.25874601462004,3.67687514644008,5.50579404996943,7.78892762319645,5.83704826373725,3.42904348098504,2.56165402086747,3.64639359389732,1.11673199600552,1.68828783009504,2.75036845998258,6.48182888042069,4.55589378557129,3.54158947068071,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.693941307064543,1.21786191324856,0.691846491768175,0.60289056221049,1.17588707135705,0,0,0,0,0,0,0,0,13.7606974595427,19.6879904404648,0.255457055208591,0,0,0,9.8861822007183,21.9600289352941,10.6806199295935,17.3824320192276,18.9229438424445,17.8697718321222,18.1710214635889,0.203678727700633,0,0,1.05220927943237,0,0.229902104433473,0.180062129805349,0.90422890701429,0.680364991513279,0.384341160854549,0.562210347358373,3.3631438196072,0,0.189106080167819,0,0,0,0,0,0.796137067273973,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0.268273401399619,0,0,0.164167464079095,0,0,0,0,20.6084149592845,14.818264182617,0,0,0,0,0.644337306610467,0.201683524623343,0.667134131534611,0.190225626112559,0,0.329397909448022,0,0.397912944082302,0,0,0.216138049874694,0.597423819763102,0,0.114248512609729,0,0.407302655690628,0,0,0,0.295220295959204,0.156998727841375,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,8.18808008937739,9.14251155419185,0,0,0.315508219416257,0,1.07711698866399,0.238968797952552,0.445597348164788,0.566153061577665,0.404810701674894,0,0.395287777946524,18.6366363524648,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0.485561272309963,0,0.188605079755898,0,0.307435147943927,0.516856586336442,0,0,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0,0.535106452806212,0.658196082408484,0.304464949114599,0,0.21183207086382,0.441056796109924,0,0,0,0,0,0,7.04616147639937,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0.432021363287205,0.418176592028937,0.436725127492355,0.674321731924103,0.41326727862668,0,0.259229946583586,0,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0.337912250981556,0.352071715937262,0,0,0,0,0,0.405450430580328,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.7195773899168,23.476587061866,34.9466263198032,30.246160092489,21.2375581128899,19.6402413321322,16.8755625057951,12.158672487054,14.5005570874945,16.5683299760582,0.207574695168353,1.19707462020309,1.53660245178721,4.61902762429759,1.46729213839588,1.83843508450014,3.77819437262746,3.91466608753899,4.1719497246936,3.79045817645696,4.05566879824384,3.2066478035633,4.775716880964,4.09760975391163,3.33125719942557,0.952587382566147,2.78122382267653,3.27945674788299,4.12085900803307,2.64958056241915,3.08582327146874,2.12970967391205,5.7224685587357,4.50573891560218,2.82328141245992,2.96151127620868,4.024415403201,2.10455769150274,3.66671107383827,1.12228454331548,3.32178050747688,3.74317033027141,1.22769312950907,3.71848418846318,2.12197272079256,5.49583271463481,4.21076895201735,2.79332370262788,0.765153328275374,0.441182838239031,0|short_description=p5@Rbfox1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:268859 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9JJ43 | |||
|association_with_transcript=176bp_to_NM_021477,uc007ycb.2,uc007ycc.2,uc012abb.1_5end | |||
|cluster_id=chr16:5885062..5885141,+ | |||
|description=CAGE_peak_5_at_Rbfox1_5end | |||
|id=chr16:5885062..5885141,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.96e-12!23;CL:0000337!1.96e-12!23;CL:0000540!1.44e-11!33;CL:0000047!1.44e-11!33;CL:0000031!1.44e-11!33;CL:0000404!1.44e-11!33;CL:0000393!5.43e-08!39;CL:0000211!5.43e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.46e-18,23;CL:0000337,5.46e-18,23;CL:0000540,2.14e-11,33;CL:0000047,2.14e-11,33;CL:0000031,2.14e-11,33;CL:0000404,2.14e-11,33;CL:0000393,1.28e-08,39;CL:0000211,1.28e-08,39;CL:0002319,3.12e-07,43;CL:0000221,6.26e-07,44;CL:0000133,6.26e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.36e-22!71;UBERON:0003075!1.36e-22!71;UBERON:0007284!1.36e-22!71;UBERON:0001017!2.65e-22!73;UBERON:0005743!2.65e-22!73;UBERON:0001049!3.85e-21!52;UBERON:0005068!3.85e-21!52;UBERON:0006241!3.85e-21!52;UBERON:0007135!3.85e-21!52;UBERON:0000073!5.55e-21!75;UBERON:0001016!5.55e-21!75;UBERON:0000955!2.77e-20!50;UBERON:0006238!2.77e-20!50;UBERON:0000033!4.78e-20!63;UBERON:0002616!1.65e-19!49;UBERON:0002020!8.96e-19!34;UBERON:0004121!2.23e-18!102;UBERON:0000924!2.23e-18!102;UBERON:0006601!2.23e-18!102;UBERON:0003056!3.78e-17!49;UBERON:0003080!2.39e-16!40;UBERON:0002791!6.31e-16!29;UBERON:0003528!6.31e-16!29;UBERON:0001893!6.31e-16!29;UBERON:0002780!1.15e-15!39;UBERON:0001890!1.15e-15!39;UBERON:0006240!1.15e-15!39;UBERON:0000956!3.33e-12!21;UBERON:0001869!3.33e-12!21;UBERON:0000203!3.33e-12!21;UBERON:0007811!8.80e-10!86;UBERON:0002619!1.50e-09!17;UBERON:0002021!3.33e-09!10;UBERON:0000411!3.33e-09!10;UBERON:0001950!3.33e-09!10;UBERON:0000153!1.12e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.04e-29,54;UBERON:0002020,1.85e-28,34;UBERON:0001049,9.64e-28,52;UBERON:0005068,9.64e-28,52;UBERON:0006241,9.64e-28,52;UBERON:0007135,9.64e-28,52;UBERON:0001017,1.28e-25,73;UBERON:0001016,1.64e-24,75;UBERON:0003528,3.96e-24,29;UBERON:0002791,3.96e-24,29;UBERON:0001893,3.96e-24,29;UBERON:0000955,1.41e-23,47;UBERON:0006238,1.41e-23,47;UBERON:0002346,2.87e-23,64;UBERON:0003075,2.87e-23,64;UBERON:0007284,2.87e-23,64;UBERON:0002616,1.77e-22,46;UBERON:0003080,6.44e-20,40;UBERON:0002780,6.14e-19,39;UBERON:0001890,6.14e-19,39;UBERON:0006240,6.14e-19,39;UBERON:0010371,1.19e-18,73;UBERON:0000956,1.70e-18,21;UBERON:0001869,1.70e-18,21;UBERON:0000203,1.70e-18,21;UBERON:0004121,8.38e-18,95;UBERON:0000924,8.38e-18,95;UBERON:0006601,8.38e-18,95;UBERON:0003056,1.67e-16,49;UBERON:0002619,1.87e-14,17;UBERON:0010314,2.16e-13,92;UBERON:0002021,4.16e-13,10;UBERON:0000411,4.16e-13,10;UBERON:0001950,4.16e-13,10;UBERON:0003076,2.65e-08,12;UBERON:0003057,2.65e-08,12;UBERON:0002420,8.96e-07,8;UBERON:0007245,8.96e-07,8;UBERON:0010009,8.96e-07,8;UBERON:0010011,8.96e-07,8;UBERON:0000454,8.96e-07,8 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02316460859598,2.64495489636016,5.07065122804943,0,0,0,0,0.7104801149461,0,0,6.0139975138917,9.18040380655497,6.94072372459561,3.71346279724945,4.41737081903227,2.9397791811589,3.25874601462004,3.67687514644008,5.50579404996943,7.78892762319645,5.83704826373725,3.42904348098504,2.56165402086747,3.64639359389732,1.11673199600552,1.68828783009504,2.75036845998258,6.48182888042069,4.55589378557129,3.54158947068071,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.693941307064543,1.21786191324856,0.691846491768175,0.60289056221049,1.17588707135705,0,0,0,0,0,0,0,0,13.7606974595427,19.6879904404648,0.255457055208591,0,0,0,9.8861822007183,21.9600289352941,10.6806199295935,17.3824320192276,18.9229438424445,17.8697718321222,18.1710214635889,0.203678727700633,0,0,1.05220927943237,0,0.229902104433473,0.180062129805349,0.90422890701429,0.680364991513279,0.384341160854549,0.562210347358373,3.3631438196072,0,0.189106080167819,0,0,0,0,0,0.796137067273973,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0.268273401399619,0,0,0.164167464079095,0,0,0,0,20.6084149592845,14.818264182617,0,0,0,0,0.644337306610467,0.201683524623343,0.667134131534611,0.190225626112559,0,0.329397909448022,0,0.397912944082302,0,0,0.216138049874694,0.597423819763102,0,0.114248512609729,0,0.407302655690628,0,0,0,0.295220295959204,0.156998727841375,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,8.18808008937739,9.14251155419185,0,0,0.315508219416257,0,1.07711698866399,0.238968797952552,0.445597348164788,0.566153061577665,0.404810701674894,0,0.395287777946524,18.6366363524648,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0.485561272309963,0,0.188605079755898,0,0.307435147943927,0.516856586336442,0,0,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0,0.535106452806212,0.658196082408484,0.304464949114599,0,0.21183207086382,0.441056796109924,0,0,0,0,0,0,7.04616147639937,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0.432021363287205,0.418176592028937,0.436725127492355,0.674321731924103,0.41326727862668,0,0.259229946583586,0,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0.337912250981556,0.352071715937262,0,0,0,0,0,0.405450430580328,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.7195773899168,23.476587061866,34.9466263198032,30.246160092489,21.2375581128899,19.6402413321322,16.8755625057951,12.158672487054,14.5005570874945,16.5683299760582,0.207574695168353,1.19707462020309,1.53660245178721,4.61902762429759,1.46729213839588,1.83843508450014,3.77819437262746,3.91466608753899,4.1719497246936,3.79045817645696,4.05566879824384,3.2066478035633,4.775716880964,4.09760975391163,3.33125719942557,0.952587382566147,2.78122382267653,3.27945674788299,4.12085900803307,2.64958056241915,3.08582327146874,2.12970967391205,5.7224685587357,4.50573891560218,2.82328141245992,2.96151127620868,4.024415403201,2.10455769150274,3.66671107383827,1.12228454331548,3.32178050747688,3.74317033027141,1.22769312950907,3.71848418846318,2.12197272079256,5.49583271463481,4.21076895201735,2.79332370262788,0.765153328275374,0.441182838239031,0 | |||
|short_description=p5@Rbfox1 | |||
}} |
Revision as of 00:14, 4 August 2015
Short description: | p5@Rbfox1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Rbfox1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 176bp_to_NM_021477, uc007ycb.2, uc007ycc.2, uc012abb.1_5end |
EntrezGene: | 268859 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.46e-18 | 23 |
neuroblast (sensu Vertebrata) | 5.46e-18 | 23 |
neuron | 2.14e-11 | 33 |
neuronal stem cell | 2.14e-11 | 33 |
neuroblast | 2.14e-11 | 33 |
electrically signaling cell | 2.14e-11 | 33 |
electrically responsive cell | 1.28e-08 | 39 |
electrically active cell | 1.28e-08 | 39 |
neural cell | 3.12e-07 | 43 |
ectodermal cell | 6.26e-07 | 44 |
neurectodermal cell | 6.26e-07 | 44 |