FFCP PHASE1:Mm9::chr10:126679854..126679865,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:126679854..126679865,-|id=chr10:126679854..126679865,-|ontology_enrichment_celltype=CL:0000117!2.71e-24!23;CL:0000337!2.71e-24!23;CL:0000540!5.95e-17!33;CL:0000047!5.95e-17!33;CL:0000031!5.95e-17!33;CL:0000404!5.95e-17!33;CL:0000393!1.82e-13!39;CL:0000211!1.82e-13!39;CL:0000221!1.68e-12!44;CL:0000133!1.68e-12!44;CL:0002319!1.08e-11!43;CL:0000055!2.68e-09!50;CL:0002609!1.26e-08!6|ontology_enrichment_celltype_v019_2=CL:0000117,2.22e-13,23;CL:0000337,2.22e-13,23;CL:0002614,1.71e-11,3;CL:0000540,7.84e-09,33;CL:0000047,7.84e-09,33;CL:0000031,7.84e-09,33;CL:0000404,7.84e-09,33;CL:0002611,1.49e-07,2;CL:0000393,3.17e-07,39;CL:0000211,3.17e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.67e-40!52;UBERON:0005068!2.67e-40!52;UBERON:0006241!2.67e-40!52;UBERON:0007135!2.67e-40!52;UBERON:0002020!4.64e-40!34;UBERON:0001017!7.23e-35!73;UBERON:0005743!7.23e-35!73;UBERON:0002616!7.57e-34!49;UBERON:0000073!1.23e-33!75;UBERON:0001016!1.23e-33!75;UBERON:0002346!2.02e-33!71;UBERON:0003075!2.02e-33!71;UBERON:0007284!2.02e-33!71;UBERON:0000955!5.62e-33!50;UBERON:0006238!5.62e-33!50;UBERON:0002791!1.61e-32!29;UBERON:0003528!1.61e-32!29;UBERON:0001893!1.61e-32!29;UBERON:0000033!4.54e-29!63;UBERON:0003080!3.71e-28!40;UBERON:0004121!6.37e-27!102;UBERON:0000924!6.37e-27!102;UBERON:0006601!6.37e-27!102;UBERON:0002780!1.06e-26!39;UBERON:0001890!1.06e-26!39;UBERON:0006240!1.06e-26!39;UBERON:0000956!2.87e-26!21;UBERON:0001869!2.87e-26!21;UBERON:0000203!2.87e-26!21;UBERON:0003056!6.96e-25!49;UBERON:0002619!3.54e-21!17;UBERON:0002021!1.08e-18!10;UBERON:0000411!1.08e-18!10;UBERON:0001950!1.08e-18!10;UBERON:0007811!1.37e-18!86;UBERON:0000153!3.68e-16!94;UBERON:0000025!8.90e-13!114;UBERON:0003076!4.17e-12!12;UBERON:0003057!4.17e-12!12;UBERON:0004111!4.27e-12!122;UBERON:0002298!1.77e-10!6;UBERON:0002240!7.10e-10!6;UBERON:0005174!7.10e-10!6;UBERON:0001137!7.10e-10!6;UBERON:0000064!7.52e-10!99;UBERON:0001948!1.61e-08!5;UBERON:0002315!1.61e-08!5;UBERON:0002950!7.29e-08!4;UBERON:0001891!7.29e-08!4;UBERON:0009616!7.29e-08!4;UBERON:0000477!1.59e-07!154;UBERON:0002420!1.83e-07!8;UBERON:0007245!1.83e-07!8;UBERON:0010009!1.83e-07!8;UBERON:0010011!1.83e-07!8;UBERON:0000454!1.83e-07!8;UBERON:0000483!4.10e-07!181;UBERON:0000119!6.38e-07!183|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.98e-37,10;UBERON:0000411,4.98e-37,10;UBERON:0001950,4.98e-37,10;UBERON:0000073,6.92e-32,54;UBERON:0002020,9.21e-32,34;UBERON:0001049,3.21e-27,52;UBERON:0005068,3.21e-27,52;UBERON:0006241,3.21e-27,52;UBERON:0007135,3.21e-27,52;UBERON:0001017,9.38e-25,73;UBERON:0001016,5.45e-24,75;UBERON:0003080,1.01e-23,40;UBERON:0003528,5.29e-23,29;UBERON:0002791,5.29e-23,29;UBERON:0001893,5.29e-23,29;UBERON:0002780,1.55e-21,39;UBERON:0001890,1.55e-21,39;UBERON:0006240,1.55e-21,39;UBERON:0002346,2.03e-21,64;UBERON:0003075,2.03e-21,64;UBERON:0007284,2.03e-21,64;UBERON:0002619,4.55e-21,17;UBERON:0002616,3.32e-20,46;UBERON:0000955,1.05e-19,47;UBERON:0006238,1.05e-19,47;UBERON:0003056,9.07e-19,49;UBERON:0010371,2.58e-18,73;UBERON:0004121,4.14e-18,95;UBERON:0000924,4.14e-18,95;UBERON:0006601,4.14e-18,95;UBERON:0000956,1.02e-16,21;UBERON:0001869,1.02e-16,21;UBERON:0000203,1.02e-16,21;UBERON:0002950,1.39e-14,4;UBERON:0001891,1.39e-14,4;UBERON:0009616,1.39e-14,4;UBERON:0010286,1.39e-14,4;UBERON:0010314,9.57e-14,92;UBERON:0002038,1.71e-11,3;UBERON:0009663,1.71e-11,3;UBERON:0009661,1.71e-11,3;UBERON:0000125,1.71e-11,3;UBERON:0002308,1.71e-11,3;UBERON:0001948,8.55e-11,5;UBERON:0002315,8.55e-11,5;UBERON:0000025,2.40e-10,114;UBERON:0004111,2.07e-09,122;UBERON:0002240,5.05e-09,6;UBERON:0005174,5.05e-09,6;UBERON:0001137,5.05e-09,6;UBERON:0002256,1.49e-07,2;UBERON:0002420,2.13e-07,8;UBERON:0007245,2.13e-07,8;UBERON:0010009,2.13e-07,8;UBERON:0010011,2.13e-07,8;UBERON:0000454,2.13e-07,8;UBERON:0011216,9.68e-07,194|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0,0,0,0,0,0,0,0,0.414758449233911,0.675029691658453,0.630974884054146,1.99955689082663,1.54607978666129,0.122490799214954,0.383381884072945,0.919218786610021,0,3.83062014255563,3.07213066512487,0.395658863190582,0.731901148819277,0,6.42120897703176,2.25105044012672,2.13917546887534,1.76777151284201,1.56608848879013,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0.161766849947409,0,0,0,0.878342391034642,0.41889341362691,0,0,0,0,2.09706895166752,2.28750301409313,0,0.521472960576829,2.81287003063364,2.0778804455956,1.94689515681309,0,0,0,0,0,0,0,0.60281927134286,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.514523061896422,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:126679854..126679865,- | |||
|description=CAGE_peak_at_chr10:126679854..126679865,- | |||
|id=chr10:126679854..126679865,- | |||
|ontology_enrichment_celltype=CL:0000117!2.71e-24!23;CL:0000337!2.71e-24!23;CL:0000540!5.95e-17!33;CL:0000047!5.95e-17!33;CL:0000031!5.95e-17!33;CL:0000404!5.95e-17!33;CL:0000393!1.82e-13!39;CL:0000211!1.82e-13!39;CL:0000221!1.68e-12!44;CL:0000133!1.68e-12!44;CL:0002319!1.08e-11!43;CL:0000055!2.68e-09!50;CL:0002609!1.26e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.22e-13,23;CL:0000337,2.22e-13,23;CL:0002614,1.71e-11,3;CL:0000540,7.84e-09,33;CL:0000047,7.84e-09,33;CL:0000031,7.84e-09,33;CL:0000404,7.84e-09,33;CL:0002611,1.49e-07,2;CL:0000393,3.17e-07,39;CL:0000211,3.17e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.67e-40!52;UBERON:0005068!2.67e-40!52;UBERON:0006241!2.67e-40!52;UBERON:0007135!2.67e-40!52;UBERON:0002020!4.64e-40!34;UBERON:0001017!7.23e-35!73;UBERON:0005743!7.23e-35!73;UBERON:0002616!7.57e-34!49;UBERON:0000073!1.23e-33!75;UBERON:0001016!1.23e-33!75;UBERON:0002346!2.02e-33!71;UBERON:0003075!2.02e-33!71;UBERON:0007284!2.02e-33!71;UBERON:0000955!5.62e-33!50;UBERON:0006238!5.62e-33!50;UBERON:0002791!1.61e-32!29;UBERON:0003528!1.61e-32!29;UBERON:0001893!1.61e-32!29;UBERON:0000033!4.54e-29!63;UBERON:0003080!3.71e-28!40;UBERON:0004121!6.37e-27!102;UBERON:0000924!6.37e-27!102;UBERON:0006601!6.37e-27!102;UBERON:0002780!1.06e-26!39;UBERON:0001890!1.06e-26!39;UBERON:0006240!1.06e-26!39;UBERON:0000956!2.87e-26!21;UBERON:0001869!2.87e-26!21;UBERON:0000203!2.87e-26!21;UBERON:0003056!6.96e-25!49;UBERON:0002619!3.54e-21!17;UBERON:0002021!1.08e-18!10;UBERON:0000411!1.08e-18!10;UBERON:0001950!1.08e-18!10;UBERON:0007811!1.37e-18!86;UBERON:0000153!3.68e-16!94;UBERON:0000025!8.90e-13!114;UBERON:0003076!4.17e-12!12;UBERON:0003057!4.17e-12!12;UBERON:0004111!4.27e-12!122;UBERON:0002298!1.77e-10!6;UBERON:0002240!7.10e-10!6;UBERON:0005174!7.10e-10!6;UBERON:0001137!7.10e-10!6;UBERON:0000064!7.52e-10!99;UBERON:0001948!1.61e-08!5;UBERON:0002315!1.61e-08!5;UBERON:0002950!7.29e-08!4;UBERON:0001891!7.29e-08!4;UBERON:0009616!7.29e-08!4;UBERON:0000477!1.59e-07!154;UBERON:0002420!1.83e-07!8;UBERON:0007245!1.83e-07!8;UBERON:0010009!1.83e-07!8;UBERON:0010011!1.83e-07!8;UBERON:0000454!1.83e-07!8;UBERON:0000483!4.10e-07!181;UBERON:0000119!6.38e-07!183 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.98e-37,10;UBERON:0000411,4.98e-37,10;UBERON:0001950,4.98e-37,10;UBERON:0000073,6.92e-32,54;UBERON:0002020,9.21e-32,34;UBERON:0001049,3.21e-27,52;UBERON:0005068,3.21e-27,52;UBERON:0006241,3.21e-27,52;UBERON:0007135,3.21e-27,52;UBERON:0001017,9.38e-25,73;UBERON:0001016,5.45e-24,75;UBERON:0003080,1.01e-23,40;UBERON:0003528,5.29e-23,29;UBERON:0002791,5.29e-23,29;UBERON:0001893,5.29e-23,29;UBERON:0002780,1.55e-21,39;UBERON:0001890,1.55e-21,39;UBERON:0006240,1.55e-21,39;UBERON:0002346,2.03e-21,64;UBERON:0003075,2.03e-21,64;UBERON:0007284,2.03e-21,64;UBERON:0002619,4.55e-21,17;UBERON:0002616,3.32e-20,46;UBERON:0000955,1.05e-19,47;UBERON:0006238,1.05e-19,47;UBERON:0003056,9.07e-19,49;UBERON:0010371,2.58e-18,73;UBERON:0004121,4.14e-18,95;UBERON:0000924,4.14e-18,95;UBERON:0006601,4.14e-18,95;UBERON:0000956,1.02e-16,21;UBERON:0001869,1.02e-16,21;UBERON:0000203,1.02e-16,21;UBERON:0002950,1.39e-14,4;UBERON:0001891,1.39e-14,4;UBERON:0009616,1.39e-14,4;UBERON:0010286,1.39e-14,4;UBERON:0010314,9.57e-14,92;UBERON:0002038,1.71e-11,3;UBERON:0009663,1.71e-11,3;UBERON:0009661,1.71e-11,3;UBERON:0000125,1.71e-11,3;UBERON:0002308,1.71e-11,3;UBERON:0001948,8.55e-11,5;UBERON:0002315,8.55e-11,5;UBERON:0000025,2.40e-10,114;UBERON:0004111,2.07e-09,122;UBERON:0002240,5.05e-09,6;UBERON:0005174,5.05e-09,6;UBERON:0001137,5.05e-09,6;UBERON:0002256,1.49e-07,2;UBERON:0002420,2.13e-07,8;UBERON:0007245,2.13e-07,8;UBERON:0010009,2.13e-07,8;UBERON:0010011,2.13e-07,8;UBERON:0000454,2.13e-07,8;UBERON:0011216,9.68e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0,0,0,0,0,0,0,0,0.414758449233911,0.675029691658453,0.630974884054146,1.99955689082663,1.54607978666129,0.122490799214954,0.383381884072945,0.919218786610021,0,3.83062014255563,3.07213066512487,0.395658863190582,0.731901148819277,0,6.42120897703176,2.25105044012672,2.13917546887534,1.76777151284201,1.56608848879013,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0.161766849947409,0,0,0,0.878342391034642,0.41889341362691,0,0,0,0,2.09706895166752,2.28750301409313,0,0.521472960576829,2.81287003063364,2.0778804455956,1.94689515681309,0,0,0,0,0,0,0,0.60281927134286,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.514523061896422,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.937693492737625,0,0,0,0,0.430846795465598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.90652579663893,6.44455331110048,5.15605962095457,4.46818274093588,5.48066015816514,5.2877572817279,5.40018000185445,4.95353323546643,8.60970577069989,8.80192529978094,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:126679854..126679865,- | |||
}} |
Latest revision as of 00:57, 4 August 2015
Short description: | p@chr10:126679854..126679865, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:126679854..126679865, - |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.22e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.22e-13 | 23 |
neuron of the substantia nigra | 1.71e-11 | 3 |
neuron | 7.84e-09 | 33 |
neuronal stem cell | 7.84e-09 | 33 |
neuroblast | 7.84e-09 | 33 |
electrically signaling cell | 7.84e-09 | 33 |
neuron of the dorsal spinal cord | 1.49e-07 | 2 |
electrically responsive cell | 3.17e-07 | 39 |
electrically active cell | 3.17e-07 | 39 |