FFCP PHASE1:Mm9::chr11:94335611..94335622,-: Difference between revisions
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{{FFCP|EntrezGene=12291|HGNC=|MCL_coexpression_id=1|UniProt=E9PWL1,Q27YN9,Q9WUT2,Q5SUF9,Q6PFV8,Q5SUG1,Q6ZPX4,Q5SUG4|association_with_transcript=-99bp_to_NM_001112813,NM_001177888,NM_001177890,NM_009783,uc007kyr.2,uc007kys.2,uc011ycv.1,uc011ycw.1_5end|description=CAGE_peak_7_at_Cacna1g_5end|id=chr11:94335611..94335622,-|ontology_enrichment_celltype=CL:0000117!7.49e-12!23;CL:0000337!7.49e-12!23;CL:0000540!9.23e-08!33;CL:0000047!9.23e-08!33;CL:0000031!9.23e-08!33;CL:0000404!9.23e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.43e-14,23;CL:0000337,2.43e-14,23;CL:0000540,5.23e-09,33;CL:0000047,5.23e-09,33;CL:0000031,5.23e-09,33;CL:0000404,5.23e-09,33;CL:0002610,6.58e-08,3;CL:0000393,3.82e-07,39;CL:0000211,3.82e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.71e-20!63;UBERON:0001049!2.92e-19!52;UBERON:0005068!2.92e-19!52;UBERON:0006241!2.92e-19!52;UBERON:0007135!2.92e-19!52;UBERON:0000955!5.37e-19!50;UBERON:0006238!5.37e-19!50;UBERON:0002616!3.06e-18!49;UBERON:0001017!8.97e-18!73;UBERON:0005743!8.97e-18!73;UBERON:0003056!4.31e-17!49;UBERON:0000073!1.15e-16!75;UBERON:0001016!1.15e-16!75;UBERON:0002020!3.56e-16!34;UBERON:0002346!4.45e-16!71;UBERON:0003075!4.45e-16!71;UBERON:0007284!4.45e-16!71;UBERON:0003080!1.01e-14!40;UBERON:0004121!1.75e-14!102;UBERON:0000924!1.75e-14!102;UBERON:0006601!1.75e-14!102;UBERON:0002780!4.93e-14!39;UBERON:0001890!4.93e-14!39;UBERON:0006240!4.93e-14!39;UBERON:0002791!1.42e-13!29;UBERON:0003528!1.42e-13!29;UBERON:0001893!1.42e-13!29;UBERON:0000153!5.51e-12!94;UBERON:0007811!1.05e-09!86;UBERON:0002021!3.06e-09!10;UBERON:0000411!3.06e-09!10;UBERON:0001950!3.06e-09!10;UBERON:0000956!7.16e-09!21;UBERON:0001869!7.16e-09!21;UBERON:0000203!7.16e-09!21;UBERON:0002619!6.71e-08!17;UBERON:0000025!9.15e-08!114;UBERON:0004111!1.99e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.22e-33,54;UBERON:0001017,2.59e-30,73;UBERON:0001049,8.30e-30,52;UBERON:0005068,8.30e-30,52;UBERON:0006241,8.30e-30,52;UBERON:0007135,8.30e-30,52;UBERON:0001016,2.81e-29,75;UBERON:0000955,4.53e-27,47;UBERON:0006238,4.53e-27,47;UBERON:0002616,2.02e-25,46;UBERON:0002020,8.43e-25,34;UBERON:0002346,8.21e-23,64;UBERON:0003075,8.21e-23,64;UBERON:0007284,8.21e-23,64;UBERON:0003528,2.89e-22,29;UBERON:0002791,2.89e-22,29;UBERON:0001893,2.89e-22,29;UBERON:0002021,1.36e-21,10;UBERON:0000411,1.36e-21,10;UBERON:0001950,1.36e-21,10;UBERON:0004121,2.53e-21,95;UBERON:0000924,2.53e-21,95;UBERON:0006601,2.53e-21,95;UBERON:0003080,7.12e-21,40;UBERON:0002780,2.23e-19,39;UBERON:0001890,2.23e-19,39;UBERON:0006240,2.23e-19,39;UBERON:0010371,4.44e-19,73;UBERON:0010314,3.89e-17,92;UBERON:0003056,5.45e-16,49;UBERON:0002619,6.55e-14,17;UBERON:0000956,6.43e-13,21;UBERON:0001869,6.43e-13,21;UBERON:0000203,6.43e-13,21;UBERON:0000025,2.64e-12,114;UBERON:0002420,3.34e-11,8;UBERON:0007245,3.34e-11,8;UBERON:0010009,3.34e-11,8;UBERON:0010011,3.34e-11,8;UBERON:0000454,3.34e-11,8;UBERON:0004111,5.51e-11,122;UBERON:0003076,2.28e-09,12;UBERON:0003057,2.28e-09,12;UBERON:0002950,1.50e-08,4;UBERON:0001891,1.50e-08,4;UBERON:0009616,1.50e-08,4;UBERON:0010286,1.50e-08,4;UBERON:0004684,6.58e-08,3;UBERON:0002275,6.58e-08,3|phase1_expression=0.640595388419176,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0.606949382578793,2.11596391708813,3.1691570175309,0,0,0,0,0,0,0,0.103689612308478,0.810035629990144,0.210324961351382,2.28520787523043,2.20868540951614,0.122490799214954,0.0958454710182364,0.919218786610021,6.60695285996332,10.853423737241,7.37311359629969,2.37395317914349,1.18933936683133,4.16730696445408,3.07101298901519,3.37657566019008,2.44477196442896,0.589257170947335,1.42371680799103,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0.485300549842228,0.220841518460394,0.484875253135222,0,2.92780797011547,6.49284791121711,0,0,0,0,3.59497534571574,1.37250180845588,0.502617408451458,3.82413504423008,3.58001640262463,5.194701113989,4.54275536589721,0.203678727700633,0,0,0.631325567659422,0.780722657776222,0.459804208866946,0.180062129805349,0.150704817835715,0.544291993210623,0.640568601424249,0.374806898238915,0.258703370739016,0.862271971731369,1.32374256117473,1.58356011747554,0.876782929710299,0.556094498451196,0.348252166522167,0.61734640922383,0.796137067273973,0,0,0,0,0,0,0.473489471170421,0.787056926989615,0.308534225774757,0.697601834251224,1.60964040839772,0.700592054203017,1.6455984991348,0.820837320395476,0.486412857275134,1.02339991197733,0.658650345873152,0.268412837520744,1.26173969138476,0.617427674275707,0,0,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0,0.898819408654221,0,0,0.379335801906163,0.114248512609729,2.25415471346161,0,0.193952487167626,0.49095073923223,0.189709611372772,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0.476087281772027,0,0.315270288212382,0.221464689648775,0,0,0,0,0,0,0,0,1.76605648986571,3.04750385139728,0.327869890753351,0,0,0,0,0,0,0,0.404810701674894,0.292255857911312,0,4.81981974632711,0,0.890328018336276,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.643011105094777,0.354680467284547,0.178368817602071,0,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0.484393280087717,0.0603129249281559,0.238744688006273,0,0,3.33765543618917,0,0.412773735926445,0,0,0,0,0,0,0,0,0.949007980743406,0.203319467126849,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0.165458490457098,0,0,0.168956125490778,0.234714477291508,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0.15241361331,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,6.21227026878773,3.22227665555024,4.01026859407578,4.98374228796694,10.9613203163303,12.0863023582352,3.37511250115903,9.00642406448441,5.89085131679466,7.7664046762773,0.31136204275253,2.39414924040619,0.512200817262403,0.972426868273176,0.209613162627982,0,0,0.618105171716683,0.320919209591815,0,0.25347929989024,0.377252682772152,0.561849044819294,0.256100609619477,0.17230640686684,0.476293691283074,0.579421629724277,0.38581844092741,0,0,0,0.177475806159338,0.238436189947321,0.436039249896986,0,0.338458431566706,0.365855945745545,0.263069711437843,0.679020569229309,0.561142271657738,0,0.29551344712669,0,0.309873682371932,0.192906610981141,0.499621155875892,0.233931608445408,0.644613162144895,0.382576664137687,0.882365676478062,0.231867835620421|short_description=p7@Cacna1g}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12291 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9PWL1,uniprot:Q27YN9,uniprot:Q9WUT2,uniprot:Q5SUF9,uniprot:Q6PFV8,uniprot:Q5SUG1,uniprot:Q6ZPX4,uniprot:Q5SUG4 | |||
|association_with_transcript=-99bp_to_NM_001112813,NM_001177888,NM_001177890,NM_009783,uc007kyr.2,uc007kys.2,uc011ycv.1,uc011ycw.1_5end | |||
|cluster_id=chr11:94335611..94335622,- | |||
|description=CAGE_peak_7_at_Cacna1g_5end | |||
|id=chr11:94335611..94335622,- | |||
|ontology_enrichment_celltype=CL:0000117!7.49e-12!23;CL:0000337!7.49e-12!23;CL:0000540!9.23e-08!33;CL:0000047!9.23e-08!33;CL:0000031!9.23e-08!33;CL:0000404!9.23e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.43e-14,23;CL:0000337,2.43e-14,23;CL:0000540,5.23e-09,33;CL:0000047,5.23e-09,33;CL:0000031,5.23e-09,33;CL:0000404,5.23e-09,33;CL:0002610,6.58e-08,3;CL:0000393,3.82e-07,39;CL:0000211,3.82e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.71e-20!63;UBERON:0001049!2.92e-19!52;UBERON:0005068!2.92e-19!52;UBERON:0006241!2.92e-19!52;UBERON:0007135!2.92e-19!52;UBERON:0000955!5.37e-19!50;UBERON:0006238!5.37e-19!50;UBERON:0002616!3.06e-18!49;UBERON:0001017!8.97e-18!73;UBERON:0005743!8.97e-18!73;UBERON:0003056!4.31e-17!49;UBERON:0000073!1.15e-16!75;UBERON:0001016!1.15e-16!75;UBERON:0002020!3.56e-16!34;UBERON:0002346!4.45e-16!71;UBERON:0003075!4.45e-16!71;UBERON:0007284!4.45e-16!71;UBERON:0003080!1.01e-14!40;UBERON:0004121!1.75e-14!102;UBERON:0000924!1.75e-14!102;UBERON:0006601!1.75e-14!102;UBERON:0002780!4.93e-14!39;UBERON:0001890!4.93e-14!39;UBERON:0006240!4.93e-14!39;UBERON:0002791!1.42e-13!29;UBERON:0003528!1.42e-13!29;UBERON:0001893!1.42e-13!29;UBERON:0000153!5.51e-12!94;UBERON:0007811!1.05e-09!86;UBERON:0002021!3.06e-09!10;UBERON:0000411!3.06e-09!10;UBERON:0001950!3.06e-09!10;UBERON:0000956!7.16e-09!21;UBERON:0001869!7.16e-09!21;UBERON:0000203!7.16e-09!21;UBERON:0002619!6.71e-08!17;UBERON:0000025!9.15e-08!114;UBERON:0004111!1.99e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.22e-33,54;UBERON:0001017,2.59e-30,73;UBERON:0001049,8.30e-30,52;UBERON:0005068,8.30e-30,52;UBERON:0006241,8.30e-30,52;UBERON:0007135,8.30e-30,52;UBERON:0001016,2.81e-29,75;UBERON:0000955,4.53e-27,47;UBERON:0006238,4.53e-27,47;UBERON:0002616,2.02e-25,46;UBERON:0002020,8.43e-25,34;UBERON:0002346,8.21e-23,64;UBERON:0003075,8.21e-23,64;UBERON:0007284,8.21e-23,64;UBERON:0003528,2.89e-22,29;UBERON:0002791,2.89e-22,29;UBERON:0001893,2.89e-22,29;UBERON:0002021,1.36e-21,10;UBERON:0000411,1.36e-21,10;UBERON:0001950,1.36e-21,10;UBERON:0004121,2.53e-21,95;UBERON:0000924,2.53e-21,95;UBERON:0006601,2.53e-21,95;UBERON:0003080,7.12e-21,40;UBERON:0002780,2.23e-19,39;UBERON:0001890,2.23e-19,39;UBERON:0006240,2.23e-19,39;UBERON:0010371,4.44e-19,73;UBERON:0010314,3.89e-17,92;UBERON:0003056,5.45e-16,49;UBERON:0002619,6.55e-14,17;UBERON:0000956,6.43e-13,21;UBERON:0001869,6.43e-13,21;UBERON:0000203,6.43e-13,21;UBERON:0000025,2.64e-12,114;UBERON:0002420,3.34e-11,8;UBERON:0007245,3.34e-11,8;UBERON:0010009,3.34e-11,8;UBERON:0010011,3.34e-11,8;UBERON:0000454,3.34e-11,8;UBERON:0004111,5.51e-11,122;UBERON:0003076,2.28e-09,12;UBERON:0003057,2.28e-09,12;UBERON:0002950,1.50e-08,4;UBERON:0001891,1.50e-08,4;UBERON:0009616,1.50e-08,4;UBERON:0010286,1.50e-08,4;UBERON:0004684,6.58e-08,3;UBERON:0002275,6.58e-08,3 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0.606949382578793,2.11596391708813,3.1691570175309,0,0,0,0,0,0,0,0.103689612308478,0.810035629990144,0.210324961351382,2.28520787523043,2.20868540951614,0.122490799214954,0.0958454710182364,0.919218786610021,6.60695285996332,10.853423737241,7.37311359629969,2.37395317914349,1.18933936683133,4.16730696445408,3.07101298901519,3.37657566019008,2.44477196442896,0.589257170947335,1.42371680799103,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0.485300549842228,0.220841518460394,0.484875253135222,0,2.92780797011547,6.49284791121711,0,0,0,0,3.59497534571574,1.37250180845588,0.502617408451458,3.82413504423008,3.58001640262463,5.194701113989,4.54275536589721,0.203678727700633,0,0,0.631325567659422,0.780722657776222,0.459804208866946,0.180062129805349,0.150704817835715,0.544291993210623,0.640568601424249,0.374806898238915,0.258703370739016,0.862271971731369,1.32374256117473,1.58356011747554,0.876782929710299,0.556094498451196,0.348252166522167,0.61734640922383,0.796137067273973,0,0,0,0,0,0,0.473489471170421,0.787056926989615,0.308534225774757,0.697601834251224,1.60964040839772,0.700592054203017,1.6455984991348,0.820837320395476,0.486412857275134,1.02339991197733,0.658650345873152,0.268412837520744,1.26173969138476,0.617427674275707,0,0,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0,0.898819408654221,0,0,0.379335801906163,0.114248512609729,2.25415471346161,0,0.193952487167626,0.49095073923223,0.189709611372772,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0.476087281772027,0,0.315270288212382,0.221464689648775,0,0,0,0,0,0,0,0,1.76605648986571,3.04750385139728,0.327869890753351,0,0,0,0,0,0,0,0.404810701674894,0.292255857911312,0,4.81981974632711,0,0.890328018336276,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.643011105094777,0.354680467284547,0.178368817602071,0,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0.484393280087717,0.0603129249281559,0.238744688006273,0,0,3.33765543618917,0,0.412773735926445,0,0,0,0,0,0,0,0,0.949007980743406,0.203319467126849,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0.165458490457098,0,0,0.168956125490778,0.234714477291508,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0.15241361331,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,6.21227026878773,3.22227665555024,4.01026859407578,4.98374228796694,10.9613203163303,12.0863023582352,3.37511250115903,9.00642406448441,5.89085131679466,7.7664046762773,0.31136204275253,2.39414924040619,0.512200817262403,0.972426868273176,0.209613162627982,0,0,0.618105171716683,0.320919209591815,0,0.25347929989024,0.377252682772152,0.561849044819294,0.256100609619477,0.17230640686684,0.476293691283074,0.579421629724277,0.38581844092741,0,0,0,0.177475806159338,0.238436189947321,0.436039249896986,0,0.338458431566706,0.365855945745545,0.263069711437843,0.679020569229309,0.561142271657738,0,0.29551344712669,0,0.309873682371932,0.192906610981141,0.499621155875892,0.233931608445408,0.644613162144895,0.382576664137687,0.882365676478062,0.231867835620421 | |||
|short_description=p7@Cacna1g | |||
}} |
Revision as of 08:48, 4 August 2015
Short description: | p7@Cacna1g |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Cacna1g_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -99bp_to_NM_001112813, NM_001177888, NM_001177890, NM_009783, uc007kyr.2, uc007kys.2, uc011ycv.1, uc011ycw.1_5end |
EntrezGene: | 12291 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.43e-14 | 23 |
neuroblast (sensu Vertebrata) | 2.43e-14 | 23 |
neuron | 5.23e-09 | 33 |
neuronal stem cell | 5.23e-09 | 33 |
neuroblast | 5.23e-09 | 33 |
electrically signaling cell | 5.23e-09 | 33 |
raphe nuclei neuron | 6.58e-08 | 3 |
electrically responsive cell | 3.82e-07 | 39 |
electrically active cell | 3.82e-07 | 39 |