FFCP PHASE1:Mm9::chr4:129662053..129662065,+: Difference between revisions
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{{FFCP|EntrezGene=230775|HGNC=|MCL_coexpression_id=288|UniProt=B1ASC0|association_with_transcript=-48bp_to_ENSMUST00000120204_5end|description=CAGE_peak_3_at_Bai2_5end|id=chr4:129662053..129662065,+|ontology_enrichment_celltype=CL:0000117!1.97e-14!23;CL:0000337!1.97e-14!23;CL:0002319!3.24e-11!43;CL:0000540!1.04e-10!33;CL:0000047!1.04e-10!33;CL:0000031!1.04e-10!33;CL:0000404!1.04e-10!33;CL:0000221!1.13e-10!44;CL:0000133!1.13e-10!44;CL:0000055!5.87e-08!50;CL:0000393!1.60e-07!39;CL:0000211!1.60e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,4.16e-24,23;CL:0000337,4.16e-24,23;CL:0000540,1.80e-15,33;CL:0000047,1.80e-15,33;CL:0000031,1.80e-15,33;CL:0000404,1.80e-15,33;CL:0002319,5.72e-14,43;CL:0000221,1.53e-13,44;CL:0000133,1.53e-13,44;CL:0000393,1.98e-12,39;CL:0000211,1.98e-12,39;CL:0002609,1.64e-08,6;CL:0002612,6.75e-07,3;CL:0002321,8.29e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.02e-26!73;UBERON:0005743!1.02e-26!73;UBERON:0000073!4.56e-26!75;UBERON:0001016!4.56e-26!75;UBERON:0001049!1.52e-24!52;UBERON:0005068!1.52e-24!52;UBERON:0006241!1.52e-24!52;UBERON:0007135!1.52e-24!52;UBERON:0004121!6.97e-24!102;UBERON:0000924!6.97e-24!102;UBERON:0006601!6.97e-24!102;UBERON:0002020!1.05e-23!34;UBERON:0002346!1.62e-23!71;UBERON:0003075!1.62e-23!71;UBERON:0007284!1.62e-23!71;UBERON:0000955!2.44e-21!50;UBERON:0006238!2.44e-21!50;UBERON:0000033!4.10e-21!63;UBERON:0002616!1.65e-20!49;UBERON:0002791!9.14e-20!29;UBERON:0003528!9.14e-20!29;UBERON:0001893!9.14e-20!29;UBERON:0003056!1.03e-19!49;UBERON:0003080!1.91e-18!40;UBERON:0002780!9.77e-18!39;UBERON:0001890!9.77e-18!39;UBERON:0006240!9.77e-18!39;UBERON:0000956!3.60e-14!21;UBERON:0001869!3.60e-14!21;UBERON:0000203!3.60e-14!21;UBERON:0000153!8.04e-12!94;UBERON:0007811!1.40e-11!86;UBERON:0002619!3.53e-11!17;UBERON:0002021!1.03e-08!10;UBERON:0000411!1.03e-08!10;UBERON:0001950!1.03e-08!10;UBERON:0002420!8.73e-07!8;UBERON:0007245!8.73e-07!8;UBERON:0010009!8.73e-07!8;UBERON:0010011!8.73e-07!8;UBERON:0000454!8.73e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.66e-48,34;UBERON:0000073,6.49e-39,54;UBERON:0001049,2.89e-38,52;UBERON:0005068,2.89e-38,52;UBERON:0006241,2.89e-38,52;UBERON:0007135,2.89e-38,52;UBERON:0003528,4.23e-38,29;UBERON:0002791,4.23e-38,29;UBERON:0001893,4.23e-38,29;UBERON:0001017,6.17e-37,73;UBERON:0001016,1.01e-35,75;UBERON:0002346,1.19e-33,64;UBERON:0003075,1.19e-33,64;UBERON:0007284,1.19e-33,64;UBERON:0003080,1.34e-33,40;UBERON:0000955,2.59e-32,47;UBERON:0006238,2.59e-32,47;UBERON:0002780,6.34e-32,39;UBERON:0001890,6.34e-32,39;UBERON:0006240,6.34e-32,39;UBERON:0002616,1.74e-30,46;UBERON:0003056,2.00e-30,49;UBERON:0004121,1.15e-29,95;UBERON:0000924,1.15e-29,95;UBERON:0006601,1.15e-29,95;UBERON:0010371,1.70e-28,73;UBERON:0000956,4.77e-27,21;UBERON:0001869,4.77e-27,21;UBERON:0000203,4.77e-27,21;UBERON:0010314,6.39e-21,92;UBERON:0002619,9.48e-20,17;UBERON:0002021,6.03e-17,10;UBERON:0000411,6.03e-17,10;UBERON:0001950,6.03e-17,10;UBERON:0000025,3.67e-13,114;UBERON:0002420,8.25e-12,8;UBERON:0007245,8.25e-12,8;UBERON:0010009,8.25e-12,8;UBERON:0010011,8.25e-12,8;UBERON:0000454,8.25e-12,8;UBERON:0004111,8.73e-12,122;UBERON:0001948,1.12e-10,5;UBERON:0002315,1.12e-10,5;UBERON:0002240,7.90e-09,6;UBERON:0005174,7.90e-09,6;UBERON:0001137,7.90e-09,6;UBERON:0011216,1.83e-08,194;UBERON:0002950,4.34e-08,4;UBERON:0001891,4.34e-08,4;UBERON:0009616,4.34e-08,4;UBERON:0010286,4.34e-08,4;UBERON:0000483,3.16e-07,174;UBERON:0000369,4.55e-07,5;UBERON:0002435,4.55e-07,5;UBERON:0000204,4.55e-07,5;UBERON:0010082,4.55e-07,5;UBERON:0000119,4.70e-07,176;UBERON:0002257,6.75e-07,3|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,1.82084814773638,1.05798195854407,0.633831403506179,0,0,0,0,0,0.599200221036809,2.68952813725088,2.17748185847803,1.62007125998029,2.73422449756797,3.14216082844184,2.42955395046775,2.44981598429908,1.24599112323707,0.919218786610021,0,1.14918604276669,0.614426133024974,0.659431438650969,1.18933936683133,1.04182674111352,1.11673199600552,1.68828783009504,1.83357897332172,3.24091444021034,1.28134512719193,1.86399445825301,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.520455980298408,0,0,0.150722640552623,0.470354828542819,0,0,0,0,0.323533699894818,0,0,0,0.585561594023094,1.04723353406728,0,0,0,0,1.79748767285787,5.94750783664214,8.92145900001337,3.99795936442236,5.8814555185976,1.24672826735736,3.24482526135515,0.203678727700633,0,0,0,0.260240885925407,0.459804208866946,0.360124259610698,0.452114453507145,1.15662048557257,1.15302348256365,0.281105173679186,0,0,0.756424320671277,0.703804496655795,0.43839146485515,0.834141747676794,0,0,0,0,0,0,0,0,0,0.473489471170421,0.196764231747404,0.154267112887378,0.465067889500816,0,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0,0,5.25724871410318,4.93942139420565,0,0,0.213288250535234,0,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0,0.387904974335251,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0,0,0.157635144106191,0,0.478364305972461,0,0,0,0,0,0,0,0.642202359951168,0.703270119553219,0.163934945376675,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0.584511715822624,0,3.85585579706168,0,0.178065603667255,0.488660878060728,0.164970122972535,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.713475270408282,0,0.913394847343798,0,0,0,0.16488625294148,0.161464426695906,0.180938774784468,0,0.164140899745061,0,0.556275906031529,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.269728692769641,0.330613822901344,0.26175594198403,0,0,0,0.149516546043979,0,0.583353565032143,0.129159823477731,0.506868376472335,0.58678619322877,0,0,0,0,0,0.202725215290164,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0.167884616364078,0,0,0,0,0,2.82375921308533,0.460325236507177,2.29158205375759,5.67115501734169,4.7955776383945,1.5107877947794,4.72515750162264,2.2516060161211,3.62513927187364,3.10656187051092,0,0,0.512200817262403,0,0,0.367687016900028,0.222246727801615,0,0,0.505394423527595,0.25347929989024,0.188626341386076,0.280924522409647,0.384150914429216,0.229741875822453,0,0.463537303779422,0.192909220463705,0,0,0.342869252385415,0.354951612318675,0,0.290692833264657,0.188218760830661,0.0846146078916765,0.182927972872773,0.263069711437843,0.271608227691724,1.12228454331548,0.237270036248348,0.591026894253381,0,0.619747364743864,0.385813221962283,0.999242311751784,0.467863216890817,0.859484216193193,0,0.441182838239031,0|short_description=p3@Bai2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:230775 | |||
|HGNC= | |||
|MCL_coexpression_id=288 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:B1ASC0 | |||
|association_with_transcript=-48bp_to_ENSMUST00000120204_5end | |||
|cluster_id=chr4:129662053..129662065,+ | |||
|description=CAGE_peak_3_at_Bai2_5end | |||
|id=chr4:129662053..129662065,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.97e-14!23;CL:0000337!1.97e-14!23;CL:0002319!3.24e-11!43;CL:0000540!1.04e-10!33;CL:0000047!1.04e-10!33;CL:0000031!1.04e-10!33;CL:0000404!1.04e-10!33;CL:0000221!1.13e-10!44;CL:0000133!1.13e-10!44;CL:0000055!5.87e-08!50;CL:0000393!1.60e-07!39;CL:0000211!1.60e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.16e-24,23;CL:0000337,4.16e-24,23;CL:0000540,1.80e-15,33;CL:0000047,1.80e-15,33;CL:0000031,1.80e-15,33;CL:0000404,1.80e-15,33;CL:0002319,5.72e-14,43;CL:0000221,1.53e-13,44;CL:0000133,1.53e-13,44;CL:0000393,1.98e-12,39;CL:0000211,1.98e-12,39;CL:0002609,1.64e-08,6;CL:0002612,6.75e-07,3;CL:0002321,8.29e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.02e-26!73;UBERON:0005743!1.02e-26!73;UBERON:0000073!4.56e-26!75;UBERON:0001016!4.56e-26!75;UBERON:0001049!1.52e-24!52;UBERON:0005068!1.52e-24!52;UBERON:0006241!1.52e-24!52;UBERON:0007135!1.52e-24!52;UBERON:0004121!6.97e-24!102;UBERON:0000924!6.97e-24!102;UBERON:0006601!6.97e-24!102;UBERON:0002020!1.05e-23!34;UBERON:0002346!1.62e-23!71;UBERON:0003075!1.62e-23!71;UBERON:0007284!1.62e-23!71;UBERON:0000955!2.44e-21!50;UBERON:0006238!2.44e-21!50;UBERON:0000033!4.10e-21!63;UBERON:0002616!1.65e-20!49;UBERON:0002791!9.14e-20!29;UBERON:0003528!9.14e-20!29;UBERON:0001893!9.14e-20!29;UBERON:0003056!1.03e-19!49;UBERON:0003080!1.91e-18!40;UBERON:0002780!9.77e-18!39;UBERON:0001890!9.77e-18!39;UBERON:0006240!9.77e-18!39;UBERON:0000956!3.60e-14!21;UBERON:0001869!3.60e-14!21;UBERON:0000203!3.60e-14!21;UBERON:0000153!8.04e-12!94;UBERON:0007811!1.40e-11!86;UBERON:0002619!3.53e-11!17;UBERON:0002021!1.03e-08!10;UBERON:0000411!1.03e-08!10;UBERON:0001950!1.03e-08!10;UBERON:0002420!8.73e-07!8;UBERON:0007245!8.73e-07!8;UBERON:0010009!8.73e-07!8;UBERON:0010011!8.73e-07!8;UBERON:0000454!8.73e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.66e-48,34;UBERON:0000073,6.49e-39,54;UBERON:0001049,2.89e-38,52;UBERON:0005068,2.89e-38,52;UBERON:0006241,2.89e-38,52;UBERON:0007135,2.89e-38,52;UBERON:0003528,4.23e-38,29;UBERON:0002791,4.23e-38,29;UBERON:0001893,4.23e-38,29;UBERON:0001017,6.17e-37,73;UBERON:0001016,1.01e-35,75;UBERON:0002346,1.19e-33,64;UBERON:0003075,1.19e-33,64;UBERON:0007284,1.19e-33,64;UBERON:0003080,1.34e-33,40;UBERON:0000955,2.59e-32,47;UBERON:0006238,2.59e-32,47;UBERON:0002780,6.34e-32,39;UBERON:0001890,6.34e-32,39;UBERON:0006240,6.34e-32,39;UBERON:0002616,1.74e-30,46;UBERON:0003056,2.00e-30,49;UBERON:0004121,1.15e-29,95;UBERON:0000924,1.15e-29,95;UBERON:0006601,1.15e-29,95;UBERON:0010371,1.70e-28,73;UBERON:0000956,4.77e-27,21;UBERON:0001869,4.77e-27,21;UBERON:0000203,4.77e-27,21;UBERON:0010314,6.39e-21,92;UBERON:0002619,9.48e-20,17;UBERON:0002021,6.03e-17,10;UBERON:0000411,6.03e-17,10;UBERON:0001950,6.03e-17,10;UBERON:0000025,3.67e-13,114;UBERON:0002420,8.25e-12,8;UBERON:0007245,8.25e-12,8;UBERON:0010009,8.25e-12,8;UBERON:0010011,8.25e-12,8;UBERON:0000454,8.25e-12,8;UBERON:0004111,8.73e-12,122;UBERON:0001948,1.12e-10,5;UBERON:0002315,1.12e-10,5;UBERON:0002240,7.90e-09,6;UBERON:0005174,7.90e-09,6;UBERON:0001137,7.90e-09,6;UBERON:0011216,1.83e-08,194;UBERON:0002950,4.34e-08,4;UBERON:0001891,4.34e-08,4;UBERON:0009616,4.34e-08,4;UBERON:0010286,4.34e-08,4;UBERON:0000483,3.16e-07,174;UBERON:0000369,4.55e-07,5;UBERON:0002435,4.55e-07,5;UBERON:0000204,4.55e-07,5;UBERON:0010082,4.55e-07,5;UBERON:0000119,4.70e-07,176;UBERON:0002257,6.75e-07,3 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,1.82084814773638,1.05798195854407,0.633831403506179,0,0,0,0,0,0.599200221036809,2.68952813725088,2.17748185847803,1.62007125998029,2.73422449756797,3.14216082844184,2.42955395046775,2.44981598429908,1.24599112323707,0.919218786610021,0,1.14918604276669,0.614426133024974,0.659431438650969,1.18933936683133,1.04182674111352,1.11673199600552,1.68828783009504,1.83357897332172,3.24091444021034,1.28134512719193,1.86399445825301,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.520455980298408,0,0,0.150722640552623,0.470354828542819,0,0,0,0,0.323533699894818,0,0,0,0.585561594023094,1.04723353406728,0,0,0,0,1.79748767285787,5.94750783664214,8.92145900001337,3.99795936442236,5.8814555185976,1.24672826735736,3.24482526135515,0.203678727700633,0,0,0,0.260240885925407,0.459804208866946,0.360124259610698,0.452114453507145,1.15662048557257,1.15302348256365,0.281105173679186,0,0,0.756424320671277,0.703804496655795,0.43839146485515,0.834141747676794,0,0,0,0,0,0,0,0,0,0.473489471170421,0.196764231747404,0.154267112887378,0.465067889500816,0,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0,0,5.25724871410318,4.93942139420565,0,0,0.213288250535234,0,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0,0.387904974335251,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0,0,0.157635144106191,0,0.478364305972461,0,0,0,0,0,0,0,0.642202359951168,0.703270119553219,0.163934945376675,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0.584511715822624,0,3.85585579706168,0,0.178065603667255,0.488660878060728,0.164970122972535,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.713475270408282,0,0.913394847343798,0,0,0,0.16488625294148,0.161464426695906,0.180938774784468,0,0.164140899745061,0,0.556275906031529,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.269728692769641,0.330613822901344,0.26175594198403,0,0,0,0.149516546043979,0,0.583353565032143,0.129159823477731,0.506868376472335,0.58678619322877,0,0,0,0,0,0.202725215290164,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0.167884616364078,0,0,0,0,0,2.82375921308533,0.460325236507177,2.29158205375759,5.67115501734169,4.7955776383945,1.5107877947794,4.72515750162264,2.2516060161211,3.62513927187364,3.10656187051092,0,0,0.512200817262403,0,0,0.367687016900028,0.222246727801615,0,0,0.505394423527595,0.25347929989024,0.188626341386076,0.280924522409647,0.384150914429216,0.229741875822453,0,0.463537303779422,0.192909220463705,0,0,0.342869252385415,0.354951612318675,0,0.290692833264657,0.188218760830661,0.0846146078916765,0.182927972872773,0.263069711437843,0.271608227691724,1.12228454331548,0.237270036248348,0.591026894253381,0,0.619747364743864,0.385813221962283,0.999242311751784,0.467863216890817,0.859484216193193,0,0.441182838239031,0 | |||
|short_description=p3@Bai2 | |||
}} |
Revision as of 19:58, 4 August 2015
Short description: | p3@Bai2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Bai2_5end |
Coexpression cluster: | MCL_coexpression_mm9:288 |
Association with transcript: | -48bp_to_ENSMUST00000120204_5end |
EntrezGene: | 230775 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.16e-24 | 23 |
neuroblast (sensu Vertebrata) | 4.16e-24 | 23 |
neuron | 1.80e-15 | 33 |
neuronal stem cell | 1.80e-15 | 33 |
neuroblast | 1.80e-15 | 33 |
electrically signaling cell | 1.80e-15 | 33 |
neural cell | 5.72e-14 | 43 |
ectodermal cell | 1.53e-13 | 44 |
neurectodermal cell | 1.53e-13 | 44 |
electrically responsive cell | 1.98e-12 | 39 |
electrically active cell | 1.98e-12 | 39 |
neuron of cerebral cortex | 1.64e-08 | 6 |
neuron of the ventral spinal cord | 6.75e-07 | 3 |
embryonic cell | 8.29e-07 | 70 |