FFCP PHASE1:Mm9::chr1:140072269..140072281,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=19264|HGNC=|MCL_coexpression_id=1496|UniProt=P06800,F8WHG6,E9QPY3,Q8C6Q7|association_with_transcript=-387bp_to_ENSMUST00000027645,ENSMUST00000074797,ENSMUST00000112036,ENSMUST00000112038,NM_001111316,NM_011210,uc007cvg.2,uc007cvh.2,uc007cvi.2,uc007cvj.2,uc007cvk.2_5end|description=CAGE_peak_7_at_Ptprc_5end|id=chr1:140072269..140072281,-|ontology_enrichment_celltype=CL:0000838!5.61e-15!12;CL:0000791!2.83e-14!9;CL:0000789!2.83e-14!9;CL:0002420!2.83e-14!9;CL:0002419!2.83e-14!9;CL:0000790!2.83e-14!9;CL:0000542!1.41e-13!13;CL:0000051!1.41e-13!13;CL:0000084!1.43e-13!11;CL:0000827!1.43e-13!11;CL:0002031!6.13e-13!25;CL:0000624!8.40e-13!8;CL:0000893!2.05e-10!6;CL:0002489!2.05e-10!6;CL:0000898!2.05e-10!6;CL:0000809!2.05e-10!6;CL:0000810!2.05e-10!6;CL:0000895!2.05e-10!6;CL:0000808!2.05e-10!6;CL:0000894!2.05e-10!6;CL:0000806!2.05e-10!6;CL:0000807!2.05e-10!6;CL:0000805!2.05e-10!6;CL:0002425!2.05e-10!6;CL:0002436!2.05e-10!6;CL:0002427!2.05e-10!6;CL:0002428!2.05e-10!6;CL:0002429!2.05e-10!6;CL:0002433!2.05e-10!6;CL:0002431!2.05e-10!6;CL:0002432!2.05e-10!6;CL:0000988!3.80e-10!32;CL:0002032!3.80e-10!32;CL:0000037!3.80e-10!32;CL:0000566!3.80e-10!32;CL:0000837!3.80e-10!32;CL:0000738!1.21e-09!17;CL:0002087!1.21e-09!17|ontology_enrichment_celltype_v019_2=CL:0000791,2.83e-27,9;CL:0000789,2.83e-27,9;CL:0002420,2.83e-27,9;CL:0002419,2.83e-27,9;CL:0000790,2.83e-27,9;CL:0000838,8.19e-25,12;CL:0000624,2.76e-24,8;CL:0000542,9.28e-23,13;CL:0000051,9.28e-23,13;CL:0000084,5.01e-22,11;CL:0000827,5.01e-22,11;CL:0002031,1.44e-21,25;CL:0000893,1.90e-19,6;CL:0002489,1.90e-19,6;CL:0000898,1.90e-19,6;CL:0000809,1.90e-19,6;CL:0000810,1.90e-19,6;CL:0000895,1.90e-19,6;CL:0000808,1.90e-19,6;CL:0000894,1.90e-19,6;CL:0000806,1.90e-19,6;CL:0000807,1.90e-19,6;CL:0000805,1.90e-19,6;CL:0002425,1.90e-19,6;CL:0002436,1.90e-19,6;CL:0002427,1.90e-19,6;CL:0002428,1.90e-19,6;CL:0002429,1.90e-19,6;CL:0002433,1.90e-19,6;CL:0002431,1.90e-19,6;CL:0002432,1.90e-19,6;CL:0000738,5.90e-17,17;CL:0002087,5.90e-17,17;CL:0000988,3.33e-16,32;CL:0002032,3.33e-16,32;CL:0000037,3.33e-16,32;CL:0000837,3.33e-16,32;CL:0002320,2.21e-10,46;CL:0000134,2.21e-10,46;CL:0000219,2.03e-08,54;CL:0000553,4.97e-08,6;CL:0000556,4.97e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!4.65e-26!48;UBERON:0004177!4.92e-26!29;UBERON:0003408!6.17e-25!24;UBERON:0002370!7.74e-24!23;UBERON:0000974!7.74e-24!23;UBERON:0004807!7.74e-24!23;UBERON:0005058!7.74e-24!23;UBERON:0003351!7.74e-24!23;UBERON:0009113!7.74e-24!23;UBERON:0003295!7.74e-24!23;UBERON:0009722!7.74e-24!23;UBERON:0005562!7.74e-24!23;UBERON:0007690!7.74e-24!23;UBERON:0006562!1.43e-22!24;UBERON:0001557!1.43e-22!24;UBERON:0001042!1.43e-22!24;UBERON:0008814!1.43e-22!24;UBERON:0009145!1.43e-22!24;UBERON:0002390!2.12e-22!45;UBERON:0003061!2.12e-22!45;UBERON:0000072!2.45e-19!27;UBERON:0001004!1.34e-16!42;UBERON:0002405!7.54e-16!70;UBERON:0000065!1.13e-15!41;UBERON:0000063!5.92e-15!35;UBERON:0003081!1.07e-12!88;UBERON:0005057!1.15e-12!51;UBERON:0003929!5.58e-10!55;UBERON:0005911!1.00e-09!69;UBERON:0001041!7.21e-09!92;UBERON:0001007!1.43e-08!128;UBERON:0001555!1.43e-08!128;UBERON:0007026!1.43e-08!128;UBERON:0004119!2.82e-08!130;UBERON:0000925!2.82e-08!130;UBERON:0006595!2.82e-08!130;UBERON:0000064!4.71e-08!99;UBERON:0000077!5.80e-08!97;UBERON:0004921!1.84e-07!126;UBERON:0004185!1.84e-07!126;UBERON:0000490!3.24e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.27e-38,48;UBERON:0002405,3.27e-38,48;UBERON:0002370,6.93e-36,23;UBERON:0000974,6.93e-36,23;UBERON:0004807,6.93e-36,23;UBERON:0005058,6.93e-36,23;UBERON:0003351,6.93e-36,23;UBERON:0009113,6.93e-36,23;UBERON:0003295,6.93e-36,23;UBERON:0009722,6.93e-36,23;UBERON:0005562,6.93e-36,23;UBERON:0007690,6.93e-36,23;UBERON:0004177,1.34e-34,29;UBERON:0005057,1.34e-34,29;UBERON:0006562,3.07e-34,24;UBERON:0003408,3.07e-34,24;UBERON:0001557,3.07e-34,24;UBERON:0001042,3.07e-34,24;UBERON:0008814,3.07e-34,24;UBERON:0009145,3.07e-34,24;UBERON:0002390,1.52e-31,45;UBERON:0003061,1.52e-31,45;UBERON:0000072,4.95e-30,27;UBERON:0000077,5.56e-28,35;UBERON:0007811,1.30e-21,36;UBERON:0000065,1.57e-18,41;UBERON:0001004,5.29e-18,42;UBERON:0000153,1.69e-17,43;UBERON:0003081,4.67e-14,87;UBERON:0003929,6.93e-13,55;UBERON:0002368,1.65e-11,60;UBERON:0002384,2.21e-10,46;UBERON:0002530,2.40e-10,65;UBERON:0000490,3.90e-10,66;UBERON:0001041,5.61e-10,80;UBERON:0005911,1.54e-09,69;UBERON:0002465,2.07e-09,3;UBERON:0000949,5.43e-09,72;UBERON:0000926,6.88e-09,120;UBERON:0004120,6.88e-09,120;UBERON:0006603,6.88e-09,120;UBERON:0001007,2.74e-07,116;UBERON:0001555,2.74e-07,116;UBERON:0007026,2.74e-07,116;UBERON:0004119,4.31e-07,118;UBERON:0000925,4.31e-07,118;UBERON:0006595,4.31e-07,118|phase1_expression=0,0,0,0,0,0.671517087647559,0.934450562382103,1.16210991097419,9.85521055061667,7.72412936862578,15.580835108521,12.0455960082958,2.9104124088305,2.44777126773193,0.999329285446988,1.01237633694913,0,5.67831897644828,2.4680598049033,2.12194825899015,0,0.397163804803541,0,1.91990907352088,1.14704640533585,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,2.68452169692378,2.17608642603403,4.36921938885203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,12.1700805314171,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0.510914110417183,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0.219550115291051,0,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.172684981865896,0.578596234326046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238744688006273,0,0,0,2.05045056957423,0,0,0.376736914009382,0.820165366326151,1.83022538565218,0.339956859987711,0.139951452323658,0,0,0,0,0,0,0,0,0,0.26175594198403,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0.202725215290164,0.718976700153791,2.46849563657811,2.8644271306797,2.18549490259391,2.16351809135944,2.65841148914239,2.42319479875554,2.66723823292499,2.21817607301049,2.63136277997332,2.30908419936791,3.27255326108393,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p7@Ptprc}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19264 | |||
|HGNC= | |||
|MCL_coexpression_id=1496 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P06800,uniprot:F8WHG6,uniprot:E9QPY3,uniprot:Q8C6Q7 | |||
|association_with_transcript=-387bp_to_ENSMUST00000027645,ENSMUST00000074797,ENSMUST00000112036,ENSMUST00000112038,NM_001111316,NM_011210,uc007cvg.2,uc007cvh.2,uc007cvi.2,uc007cvj.2,uc007cvk.2_5end | |||
|cluster_id=chr1:140072269..140072281,- | |||
|description=CAGE_peak_7_at_Ptprc_5end | |||
|id=chr1:140072269..140072281,- | |||
|ontology_enrichment_celltype=CL:0000838!5.61e-15!12;CL:0000791!2.83e-14!9;CL:0000789!2.83e-14!9;CL:0002420!2.83e-14!9;CL:0002419!2.83e-14!9;CL:0000790!2.83e-14!9;CL:0000542!1.41e-13!13;CL:0000051!1.41e-13!13;CL:0000084!1.43e-13!11;CL:0000827!1.43e-13!11;CL:0002031!6.13e-13!25;CL:0000624!8.40e-13!8;CL:0000893!2.05e-10!6;CL:0002489!2.05e-10!6;CL:0000898!2.05e-10!6;CL:0000809!2.05e-10!6;CL:0000810!2.05e-10!6;CL:0000895!2.05e-10!6;CL:0000808!2.05e-10!6;CL:0000894!2.05e-10!6;CL:0000806!2.05e-10!6;CL:0000807!2.05e-10!6;CL:0000805!2.05e-10!6;CL:0002425!2.05e-10!6;CL:0002436!2.05e-10!6;CL:0002427!2.05e-10!6;CL:0002428!2.05e-10!6;CL:0002429!2.05e-10!6;CL:0002433!2.05e-10!6;CL:0002431!2.05e-10!6;CL:0002432!2.05e-10!6;CL:0000988!3.80e-10!32;CL:0002032!3.80e-10!32;CL:0000037!3.80e-10!32;CL:0000566!3.80e-10!32;CL:0000837!3.80e-10!32;CL:0000738!1.21e-09!17;CL:0002087!1.21e-09!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.83e-27,9;CL:0000789,2.83e-27,9;CL:0002420,2.83e-27,9;CL:0002419,2.83e-27,9;CL:0000790,2.83e-27,9;CL:0000838,8.19e-25,12;CL:0000624,2.76e-24,8;CL:0000542,9.28e-23,13;CL:0000051,9.28e-23,13;CL:0000084,5.01e-22,11;CL:0000827,5.01e-22,11;CL:0002031,1.44e-21,25;CL:0000893,1.90e-19,6;CL:0002489,1.90e-19,6;CL:0000898,1.90e-19,6;CL:0000809,1.90e-19,6;CL:0000810,1.90e-19,6;CL:0000895,1.90e-19,6;CL:0000808,1.90e-19,6;CL:0000894,1.90e-19,6;CL:0000806,1.90e-19,6;CL:0000807,1.90e-19,6;CL:0000805,1.90e-19,6;CL:0002425,1.90e-19,6;CL:0002436,1.90e-19,6;CL:0002427,1.90e-19,6;CL:0002428,1.90e-19,6;CL:0002429,1.90e-19,6;CL:0002433,1.90e-19,6;CL:0002431,1.90e-19,6;CL:0002432,1.90e-19,6;CL:0000738,5.90e-17,17;CL:0002087,5.90e-17,17;CL:0000988,3.33e-16,32;CL:0002032,3.33e-16,32;CL:0000037,3.33e-16,32;CL:0000837,3.33e-16,32;CL:0002320,2.21e-10,46;CL:0000134,2.21e-10,46;CL:0000219,2.03e-08,54;CL:0000553,4.97e-08,6;CL:0000556,4.97e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.65e-26!48;UBERON:0004177!4.92e-26!29;UBERON:0003408!6.17e-25!24;UBERON:0002370!7.74e-24!23;UBERON:0000974!7.74e-24!23;UBERON:0004807!7.74e-24!23;UBERON:0005058!7.74e-24!23;UBERON:0003351!7.74e-24!23;UBERON:0009113!7.74e-24!23;UBERON:0003295!7.74e-24!23;UBERON:0009722!7.74e-24!23;UBERON:0005562!7.74e-24!23;UBERON:0007690!7.74e-24!23;UBERON:0006562!1.43e-22!24;UBERON:0001557!1.43e-22!24;UBERON:0001042!1.43e-22!24;UBERON:0008814!1.43e-22!24;UBERON:0009145!1.43e-22!24;UBERON:0002390!2.12e-22!45;UBERON:0003061!2.12e-22!45;UBERON:0000072!2.45e-19!27;UBERON:0001004!1.34e-16!42;UBERON:0002405!7.54e-16!70;UBERON:0000065!1.13e-15!41;UBERON:0000063!5.92e-15!35;UBERON:0003081!1.07e-12!88;UBERON:0005057!1.15e-12!51;UBERON:0003929!5.58e-10!55;UBERON:0005911!1.00e-09!69;UBERON:0001041!7.21e-09!92;UBERON:0001007!1.43e-08!128;UBERON:0001555!1.43e-08!128;UBERON:0007026!1.43e-08!128;UBERON:0004119!2.82e-08!130;UBERON:0000925!2.82e-08!130;UBERON:0006595!2.82e-08!130;UBERON:0000064!4.71e-08!99;UBERON:0000077!5.80e-08!97;UBERON:0004921!1.84e-07!126;UBERON:0004185!1.84e-07!126;UBERON:0000490!3.24e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.27e-38,48;UBERON:0002405,3.27e-38,48;UBERON:0002370,6.93e-36,23;UBERON:0000974,6.93e-36,23;UBERON:0004807,6.93e-36,23;UBERON:0005058,6.93e-36,23;UBERON:0003351,6.93e-36,23;UBERON:0009113,6.93e-36,23;UBERON:0003295,6.93e-36,23;UBERON:0009722,6.93e-36,23;UBERON:0005562,6.93e-36,23;UBERON:0007690,6.93e-36,23;UBERON:0004177,1.34e-34,29;UBERON:0005057,1.34e-34,29;UBERON:0006562,3.07e-34,24;UBERON:0003408,3.07e-34,24;UBERON:0001557,3.07e-34,24;UBERON:0001042,3.07e-34,24;UBERON:0008814,3.07e-34,24;UBERON:0009145,3.07e-34,24;UBERON:0002390,1.52e-31,45;UBERON:0003061,1.52e-31,45;UBERON:0000072,4.95e-30,27;UBERON:0000077,5.56e-28,35;UBERON:0007811,1.30e-21,36;UBERON:0000065,1.57e-18,41;UBERON:0001004,5.29e-18,42;UBERON:0000153,1.69e-17,43;UBERON:0003081,4.67e-14,87;UBERON:0003929,6.93e-13,55;UBERON:0002368,1.65e-11,60;UBERON:0002384,2.21e-10,46;UBERON:0002530,2.40e-10,65;UBERON:0000490,3.90e-10,66;UBERON:0001041,5.61e-10,80;UBERON:0005911,1.54e-09,69;UBERON:0002465,2.07e-09,3;UBERON:0000949,5.43e-09,72;UBERON:0000926,6.88e-09,120;UBERON:0004120,6.88e-09,120;UBERON:0006603,6.88e-09,120;UBERON:0001007,2.74e-07,116;UBERON:0001555,2.74e-07,116;UBERON:0007026,2.74e-07,116;UBERON:0004119,4.31e-07,118;UBERON:0000925,4.31e-07,118;UBERON:0006595,4.31e-07,118 | |||
|phase1_expression=0,0,0,0,0,0.671517087647559,0.934450562382103,1.16210991097419,9.85521055061667,7.72412936862578,15.580835108521,12.0455960082958,2.9104124088305,2.44777126773193,0.999329285446988,1.01237633694913,0,5.67831897644828,2.4680598049033,2.12194825899015,0,0.397163804803541,0,1.91990907352088,1.14704640533585,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,2.68452169692378,2.17608642603403,4.36921938885203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,12.1700805314171,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0.510914110417183,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0.219550115291051,0,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.172684981865896,0.578596234326046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238744688006273,0,0,0,2.05045056957423,0,0,0.376736914009382,0.820165366326151,1.83022538565218,0.339956859987711,0.139951452323658,0,0,0,0,0,0,0,0,0,0.26175594198403,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0.202725215290164,0.718976700153791,2.46849563657811,2.8644271306797,2.18549490259391,2.16351809135944,2.65841148914239,2.42319479875554,2.66723823292499,2.21817607301049,2.63136277997332,2.30908419936791,3.27255326108393,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p7@Ptprc | |||
}} |
Revision as of 22:25, 4 August 2015
Short description: | p7@Ptprc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Ptprc_5end |
Coexpression cluster: | MCL_coexpression_mm9:1496 |
Association with transcript: | -387bp_to_ENSMUST00000027645, ENSMUST00000074797, ENSMUST00000112036, ENSMUST00000112038, NM_001111316, NM_011210, uc007cvg.2, uc007cvh.2, uc007cvi.2, uc007cvj.2, uc007cvk.2_5end |
EntrezGene: | 19264 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data