FFCP PHASE1:Mm9::chr11:104189890..104189912,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:104189890..104189912,+ | |||
|description=CAGE_peak_at_chr11:104189890..104189912,+ | |description=CAGE_peak_at_chr11:104189890..104189912,+ | ||
|id=chr11:104189890..104189912,+ | |id=chr11:104189890..104189912,+ | ||
|ontology_enrichment_celltype=CL:0000117!3.86e-19!23;CL:0000337!3.86e-19!23;CL:0000540!4.64e-16!33;CL:0000047!4.64e-16!33;CL:0000031!4.64e-16!33;CL:0000404!4.64e-16!33;CL:0002319!1.29e-12!43;CL:0000221!4.47e-12!44;CL:0000133!4.47e-12!44;CL:0000393!5.86e-12!39;CL:0000211!5.86e-12!39;CL:0000055!2.40e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.35e-44,23;CL:0000337,4.35e-44,23;CL:0000540,3.25e-29,33;CL:0000047,3.25e-29,33;CL:0000031,3.25e-29,33;CL:0000404,3.25e-29,33;CL:0000393,5.93e-24,39;CL:0000211,5.93e-24,39;CL:0002319,2.91e-21,43;CL:0000221,1.15e-20,44;CL:0000133,1.15e-20,44;CL:0002321,3.63e-11,70;CL:0002609,4.33e-10,6;CL:0002613,2.80e-09,3;CL:0002612,8.21e-09,3;CL:0000120,9.23e-09,3;CL:0002610,1.62e-07,3;CL:0000723,1.71e-07,91;CL:0000048,1.71e-07,91;CL:0000034,9.58e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.97e-29!73;UBERON:0005743!2.97e-29!73;UBERON:0000073!9.15e-29!75;UBERON:0001016!9.15e-29!75;UBERON:0004121!9.96e-26!102;UBERON:0000924!9.96e-26!102;UBERON:0006601!9.96e-26!102;UBERON:0002346!6.98e-25!71;UBERON:0003075!6.98e-25!71;UBERON:0007284!6.98e-25!71;UBERON:0001049!1.09e-24!52;UBERON:0005068!1.09e-24!52;UBERON:0006241!1.09e-24!52;UBERON:0007135!1.09e-24!52;UBERON:0002020!9.97e-24!34;UBERON:0000955!1.09e-22!50;UBERON:0006238!1.09e-22!50;UBERON:0002616!4.94e-22!49;UBERON:0000033!6.32e-22!63;UBERON:0002791!4.05e-19!29;UBERON:0003528!4.05e-19!29;UBERON:0001893!4.05e-19!29;UBERON:0003080!1.07e-18!40;UBERON:0003056!4.06e-18!49;UBERON:0002780!5.59e-18!39;UBERON:0001890!5.59e-18!39;UBERON:0006240!5.59e-18!39;UBERON:0000956!2.60e-12!21;UBERON:0001869!2.60e-12!21;UBERON:0000203!2.60e-12!21;UBERON:0007811!1.83e-11!86;UBERON:0002021!6.61e-10!10;UBERON:0000411!6.61e-10!10;UBERON:0001950!6.61e-10!10;UBERON:0000153!9.63e-10!94;UBERON:0002619!2.18e-09!17;UBERON:0000025!6.70e-09!114;UBERON:0004111!2.87e-08!122;UBERON:0002420!3.21e-08!8;UBERON:0007245!3.21e-08!8;UBERON:0010009!3.21e-08!8;UBERON:0010011!3.21e-08!8;UBERON:0000454!3.21e-08!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.21e-52,34;UBERON:0000073,7.41e-44,54;UBERON:0003528,6.07e-41,29;UBERON:0002791,6.07e-41,29;UBERON:0001893,6.07e-41,29;UBERON:0001017,4.58e-38,73;UBERON:0001049,3.04e-37,52;UBERON:0005068,3.04e-37,52;UBERON:0006241,3.04e-37,52;UBERON:0007135,3.04e-37,52;UBERON:0001016,7.22e-37,75;UBERON:0003080,1.98e-33,40;UBERON:0002780,1.02e-31,39;UBERON:0001890,1.02e-31,39;UBERON:0006240,1.02e-31,39;UBERON:0002346,4.76e-29,64;UBERON:0003075,4.76e-29,64;UBERON:0007284,4.76e-29,64;UBERON:0002616,2.53e-28,46;UBERON:0004121,1.18e-27,95;UBERON:0000924,1.18e-27,95;UBERON:0006601,1.18e-27,95;UBERON:0000955,1.34e-27,47;UBERON:0006238,1.34e-27,47;UBERON:0000956,5.87e-27,21;UBERON:0001869,5.87e-27,21;UBERON:0000203,5.87e-27,21;UBERON:0003056,3.08e-26,49;UBERON:0010371,1.15e-24,73;UBERON:0002021,4.30e-23,10;UBERON:0000411,4.30e-23,10;UBERON:0001950,4.30e-23,10;UBERON:0002619,5.53e-22,17;UBERON:0010314,3.17e-18,92;UBERON:0002420,7.69e-15,8;UBERON:0007245,7.69e-15,8;UBERON:0010009,7.69e-15,8;UBERON:0010011,7.69e-15,8;UBERON:0000454,7.69e-15,8;UBERON:0000025,1.27e-14,114;UBERON:0000369,2.00e-13,5;UBERON:0002435,2.00e-13,5;UBERON:0000204,2.00e-13,5;UBERON:0010082,2.00e-13,5;UBERON:0004111,3.17e-13,122;UBERON:0001948,9.40e-13,5;UBERON:0002315,9.40e-13,5;UBERON:0011216,8.23e-11,194;UBERON:0002240,1.44e-10,6;UBERON:0005174,1.44e-10,6;UBERON:0001137,1.44e-10,6;UBERON:0002257,8.21e-09,3;UBERON:0004684,1.62e-07,3;UBERON:0002275,1.62e-07,3;UBERON:0000483,2.90e-07,174;UBERON:0000119,4.18e-07,176 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83243045203437,3.70293685490423,4.43681982454325,0,0,0,0,0,0.898800331555214,0.384218305321555,2.38486108309499,4.05017814995072,2.10324961351382,2.28520787523043,1.32521124570968,1.10241719293459,2.30029130443767,0,2.20231761998777,1.14918604276669,1.84327839907492,4.2203612073662,7.50198677539759,7.29278718779464,0.837548997004143,1.12552522006336,1.68078072554491,5.00868595305235,3.98640706237488,2.79599168737951,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0,0,0.230615497256059,0.452167921657868,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0.628340120440365,0,0,0,0,1.04853447583376,1.83000241127451,2.38743269014442,0.347648640384553,0.511430914660661,0.41557608911912,1.29793010454206,0,0,0,0,0,0,0,0.452114453507145,0.340182495756639,0.2562274405697,0.562210347358373,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0.146199987425332,0.439100230582101,0.402619256281115,0.210289948564127,4.73361216944708,0,0,0,0,0,0,0,0,0,0,0.502670417600539,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784993639206874,0.123397163921801,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0.81931657357869,0.345369963731791,0.144649058581512,0,0,0,0,0.963303539926752,0.937693492737625,0,0.757412781613119,0.315508219416257,0,0.430846795465598,0,0.222798674082394,0,0.404810701674894,0.292255857911312,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,2.25900737046827,1.84130094602871,4.01026859407578,1.3748254587495,2.74033007908257,3.0215755895588,1.35004500046361,3.15224842256954,1.81256963593682,3.62432218226274,0.207574695168353,0,0,0,0,0,0.44449345560323,0.618105171716683,0,0.252697211763798,0.760437899670719,0.565879024158229,0.280924522409647,0.256100609619477,0.287177344778066,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0.177475806159338,0.476872379894642,0.436039249896986,0.188218760830661,0.169229215783353,0.73171189149109,0.526139422875686,0.407412341537585,0,0.474540072496697,0.689531376628944,0.818462086339379,0.154936841185966,0.192906610981141,0.749431733813838,0.233931608445408,0,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83243045203437,3.70293685490423,4.43681982454325,0,0,0,0,0,0.898800331555214,0.384218305321555,2.38486108309499,4.05017814995072,2.10324961351382,2.28520787523043,1.32521124570968,1.10241719293459,2.30029130443767,0,2.20231761998777,1.14918604276669,1.84327839907492,4.2203612073662,7.50198677539759,7.29278718779464,0.837548997004143,1.12552522006336,1.68078072554491,5.00868595305235,3.98640706237488,2.79599168737951,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0,0,0.230615497256059,0.452167921657868,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0.628340120440365,0,0,0,0,1.04853447583376,1.83000241127451,2.38743269014442,0.347648640384553,0.511430914660661,0.41557608911912,1.29793010454206,0,0,0,0,0,0,0,0.452114453507145,0.340182495756639,0.2562274405697,0.562210347358373,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0.146199987425332,0.439100230582101,0.402619256281115,0.210289948564127,4.73361216944708,0,0,0,0,0,0,0,0,0,0,0.502670417600539,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784993639206874,0.123397163921801,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0.81931657357869,0.345369963731791,0.144649058581512,0,0,0,0,0.963303539926752,0.937693492737625,0,0.757412781613119,0.315508219416257,0,0.430846795465598,0,0.222798674082394,0,0.404810701674894,0.292255857911312,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,2.25900737046827,1.84130094602871,4.01026859407578,1.3748254587495,2.74033007908257,3.0215755895588,1.35004500046361,3.15224842256954,1.81256963593682,3.62432218226274,0.207574695168353,0,0,0,0,0,0.44449345560323,0.618105171716683,0,0.252697211763798,0.760437899670719,0.565879024158229,0.280924522409647,0.256100609619477,0.287177344778066,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0.177475806159338,0.476872379894642,0.436039249896986,0.188218760830661,0.169229215783353,0.73171189149109,0.526139422875686,0.407412341537585,0,0.474540072496697,0.689531376628944,0.818462086339379,0.154936841185966,0.192906610981141,0.749431733813838,0.233931608445408,0,0.191288332068843,0,0 | ||
|short_description=p@chr11:104189890..104189912,+ | |short_description=p@chr11:104189890..104189912,+ | ||
}} | }} |
Latest revision as of 06:47, 5 August 2015
Short description: | p@chr11:104189890..104189912, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:104189890..104189912, + |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.35e-44 | 23 |
neuroblast (sensu Vertebrata) | 4.35e-44 | 23 |
neuron | 3.25e-29 | 33 |
neuronal stem cell | 3.25e-29 | 33 |
neuroblast | 3.25e-29 | 33 |
electrically signaling cell | 3.25e-29 | 33 |
electrically responsive cell | 5.93e-24 | 39 |
electrically active cell | 5.93e-24 | 39 |
neural cell | 2.91e-21 | 43 |
ectodermal cell | 1.15e-20 | 44 |
neurectodermal cell | 1.15e-20 | 44 |
embryonic cell | 3.63e-11 | 70 |
neuron of cerebral cortex | 4.33e-10 | 6 |
striatum neuron | 2.80e-09 | 3 |
neuron of the ventral spinal cord | 8.21e-09 | 3 |
granule cell | 9.23e-09 | 3 |
raphe nuclei neuron | 1.62e-07 | 3 |
somatic stem cell | 1.71e-07 | 91 |
multi fate stem cell | 1.71e-07 | 91 |
stem cell | 9.58e-07 | 97 |