FFCP PHASE1:Mm9::chr2:61884568..61884628,+: Difference between revisions
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{{FFCP|EntrezGene=94229|HGNC=|MCL_coexpression_id=2|UniProt=F1DFN1,Q8C943,B1AWV9,B1AWV8,Q5DTL9,E9NX85,B1AWV7|association_with_transcript=0bp_to_NM_001242378,NM_001242379,NM_001242380,NM_001242381,NM_001242382,NM_001242383,NM_033552,uc008jve.2,uc008jvf.2,uc012bvu.1,uc012bvv.1,uc012bvw.1,uc012bvx.1_5end|description=CAGE_peak_1_at_Slc4a10_5end|id=chr2:61884568..61884628,+|ontology_enrichment_celltype=CL:0000117!3.74e-10!23;CL:0000337!3.74e-10!23;CL:0000221!3.24e-08!44;CL:0000133!3.24e-08!44;CL:0002319!4.92e-08!43;CL:0000540!7.28e-08!33;CL:0000047!7.28e-08!33;CL:0000031!7.28e-08!33;CL:0000404!7.28e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.58e-12,23;CL:0000337,2.58e-12,23;CL:0000540,2.41e-07,33;CL:0000047,2.41e-07,33;CL:0000031,2.41e-07,33;CL:0000404,2.41e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.66e-27!75;UBERON:0001016!1.66e-27!75;UBERON:0002346!1.96e-27!71;UBERON:0003075!1.96e-27!71;UBERON:0007284!1.96e-27!71;UBERON:0001017!7.29e-27!73;UBERON:0005743!7.29e-27!73;UBERON:0004121!2.71e-26!102;UBERON:0000924!2.71e-26!102;UBERON:0006601!2.71e-26!102;UBERON:0000033!3.43e-26!63;UBERON:0001049!1.00e-25!52;UBERON:0005068!1.00e-25!52;UBERON:0006241!1.00e-25!52;UBERON:0007135!1.00e-25!52;UBERON:0000955!9.66e-25!50;UBERON:0006238!9.66e-25!50;UBERON:0002616!5.84e-24!49;UBERON:0003056!2.70e-22!49;UBERON:0003080!1.70e-19!40;UBERON:0002780!9.03e-19!39;UBERON:0001890!9.03e-19!39;UBERON:0006240!9.03e-19!39;UBERON:0002020!1.75e-17!34;UBERON:0002791!1.78e-14!29;UBERON:0003528!1.78e-14!29;UBERON:0001893!1.78e-14!29;UBERON:0007811!1.85e-14!86;UBERON:0000153!3.09e-12!94;UBERON:0000956!3.01e-10!21;UBERON:0001869!3.01e-10!21;UBERON:0000203!3.01e-10!21;UBERON:0002021!2.27e-09!10;UBERON:0000411!2.27e-09!10;UBERON:0001950!2.27e-09!10;UBERON:0002619!4.70e-09!17;UBERON:0003076!8.92e-07!12;UBERON:0003057!8.92e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.25e-32,54;UBERON:0001049,4.15e-30,52;UBERON:0005068,4.15e-30,52;UBERON:0006241,4.15e-30,52;UBERON:0007135,4.15e-30,52;UBERON:0002346,5.70e-29,64;UBERON:0003075,5.70e-29,64;UBERON:0007284,5.70e-29,64;UBERON:0001016,2.25e-28,75;UBERON:0001017,1.52e-27,73;UBERON:0000955,5.41e-26,47;UBERON:0006238,5.41e-26,47;UBERON:0002616,5.23e-25,46;UBERON:0004121,2.50e-24,95;UBERON:0000924,2.50e-24,95;UBERON:0006601,2.50e-24,95;UBERON:0010371,4.23e-23,73;UBERON:0003056,8.88e-23,49;UBERON:0003080,1.12e-21,40;UBERON:0002780,9.52e-21,39;UBERON:0001890,9.52e-21,39;UBERON:0006240,9.52e-21,39;UBERON:0002020,1.89e-20,34;UBERON:0010314,2.21e-18,92;UBERON:0003528,1.60e-16,29;UBERON:0002791,1.60e-16,29;UBERON:0001893,1.60e-16,29;UBERON:0002021,5.83e-12,10;UBERON:0000411,5.83e-12,10;UBERON:0001950,5.83e-12,10;UBERON:0000956,5.09e-11,21;UBERON:0001869,5.09e-11,21;UBERON:0000203,5.09e-11,21;UBERON:0002619,2.16e-09,17;UBERON:0003076,8.42e-09,12;UBERON:0003057,8.42e-09,12;UBERON:0002420,7.27e-07,8;UBERON:0007245,7.27e-07,8;UBERON:0010009,7.27e-07,8;UBERON:0010011,7.27e-07,8;UBERON:0000454,7.27e-07,8|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,30.1053247134787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,0,0.219686182734472,0.194429899074283,1.39986421625363,0,0,0,0,0,0,0,3.84401275633236,8.99284664762456,5.70448263155561,0,0.889294796111139,0,0.988866362566974,0,0.299600110518405,0.768436610643109,2.07379224616955,1.21505344498522,1.05162480675691,16.2821061110168,17.6694832761291,2.44981598429908,0.766763768145891,0,49.5521464497249,75.4632168083459,56.8344173048101,2.76961204233407,5.03182039813253,6.25096044668112,27.6391169011367,48.9603470727562,50.1178252707937,30.9360014747351,46.1284245789094,11.3703661953433,2.49896437999507,1.5870027622425,0.289864488701678,0,0,0.539703191637817,0,0,5.05599912474307,0,0,0,0.985903938436763,0,0,0,0,0,0,2.8545969929765,0,6.82833839698194,0,0,0.691846491768175,0.452167921657868,1.05829836422134,1.0053327306374,0,0.144599356919912,0,0,0,0,0,157.808849589224,168.814045691645,0,0,0,0,95.2668466614672,97.9051290031861,8.16753288733619,204.765049186502,229.888196139967,83.9463700020623,118.111639513328,0.101839363850316,0,0,15.1518136238261,0.260240885925407,0.919608417733892,0.540186389416048,1.80845781402858,2.9255694635071,6.02134485338794,3.65436725782942,52.2580808892812,0,0,0,0.657587197282725,0.556094498451196,0,0,0,0,0,0,0,0,1.08037236876609,0.473489471170421,0.983821158737019,0.925602677324269,1.16266972375204,0.804820204198858,0.467061369468678,0,0,0.162137619091711,0,0,0,184.003704993611,21.4041593748912,0,0.264450566663544,0,0.696710015581316,0,0,0.22237804384487,0,0.474529061544512,0,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0.210407459670956,0,0.295220295959204,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,57.4771112156295,55.6755511312965,0,0,0.315508219416257,0,0.430846795465598,0,0,0.566153061577665,0,0.292255857911312,1.97643888973262,147.807805554031,0,0,0.162886959353576,0,1.32745138339963,0.242780636154981,0,0,0,0.307435147943927,0.775284879504663,0,0.356497378384721,0,0,0,18.7241783164583,0.18006109403131,0.258717367565509,1.71469628025274,7.80297028026004,28.7173796339334,30.9352158731987,11.8741330154694,0,0,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0,0.582961673259701,43.5749459724698,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0.944050424693745,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0.13020438484395,0.419437377702843,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0,0.100826185136841,0.194915761479505,0,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,223.076977833741,264.22668575512,215.981608566653,204.848993353676,306.916968857248,290.826650495035,267.983932592027,305.317775786021,302.699129201449,247.48942901737,0.103787347584177,0.798049746802062,1.36586884603307,2.43106717068294,1.25767897576789,3.8607136774503,3.55594764482584,4.32673620201678,6.4183841918363,5.30664144703975,5.83002389747551,5.47016390019621,3.83930180626518,4.54578582074572,5.34149861287203,5.71552429539688,5.2147946675185,4.43691207066522,3.29668720642645,4.71036544430071,6.51451579532289,4.08194354166476,3.09967046931517,4.50573891560218,5.36423468367385,4.3153450024755,4.57319932181931,5.26139422875686,5.56796866768033,3.36685362994643,3.79632057997357,3.54616136552028,4.91077251803627,3.25367366490529,4.05103883060397,5.24602213669686,3.74290573512653,5.37177635120746,3.82576664137687,1.98532277207564,0.927471342481686|short_description=p1@Slc4a10}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:94229 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F1DFN1,uniprot:Q8C943,uniprot:B1AWV9,uniprot:B1AWV8,uniprot:Q5DTL9,uniprot:E9NX85,uniprot:B1AWV7 | |||
|association_with_transcript=0bp_to_NM_001242378,NM_001242379,NM_001242380,NM_001242381,NM_001242382,NM_001242383,NM_033552,uc008jve.2,uc008jvf.2,uc012bvu.1,uc012bvv.1,uc012bvw.1,uc012bvx.1_5end | |||
|cluster_id=chr2:61884568..61884628,+ | |||
|description=CAGE_peak_1_at_Slc4a10_5end | |||
|id=chr2:61884568..61884628,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.74e-10!23;CL:0000337!3.74e-10!23;CL:0000221!3.24e-08!44;CL:0000133!3.24e-08!44;CL:0002319!4.92e-08!43;CL:0000540!7.28e-08!33;CL:0000047!7.28e-08!33;CL:0000031!7.28e-08!33;CL:0000404!7.28e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.58e-12,23;CL:0000337,2.58e-12,23;CL:0000540,2.41e-07,33;CL:0000047,2.41e-07,33;CL:0000031,2.41e-07,33;CL:0000404,2.41e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.66e-27!75;UBERON:0001016!1.66e-27!75;UBERON:0002346!1.96e-27!71;UBERON:0003075!1.96e-27!71;UBERON:0007284!1.96e-27!71;UBERON:0001017!7.29e-27!73;UBERON:0005743!7.29e-27!73;UBERON:0004121!2.71e-26!102;UBERON:0000924!2.71e-26!102;UBERON:0006601!2.71e-26!102;UBERON:0000033!3.43e-26!63;UBERON:0001049!1.00e-25!52;UBERON:0005068!1.00e-25!52;UBERON:0006241!1.00e-25!52;UBERON:0007135!1.00e-25!52;UBERON:0000955!9.66e-25!50;UBERON:0006238!9.66e-25!50;UBERON:0002616!5.84e-24!49;UBERON:0003056!2.70e-22!49;UBERON:0003080!1.70e-19!40;UBERON:0002780!9.03e-19!39;UBERON:0001890!9.03e-19!39;UBERON:0006240!9.03e-19!39;UBERON:0002020!1.75e-17!34;UBERON:0002791!1.78e-14!29;UBERON:0003528!1.78e-14!29;UBERON:0001893!1.78e-14!29;UBERON:0007811!1.85e-14!86;UBERON:0000153!3.09e-12!94;UBERON:0000956!3.01e-10!21;UBERON:0001869!3.01e-10!21;UBERON:0000203!3.01e-10!21;UBERON:0002021!2.27e-09!10;UBERON:0000411!2.27e-09!10;UBERON:0001950!2.27e-09!10;UBERON:0002619!4.70e-09!17;UBERON:0003076!8.92e-07!12;UBERON:0003057!8.92e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.25e-32,54;UBERON:0001049,4.15e-30,52;UBERON:0005068,4.15e-30,52;UBERON:0006241,4.15e-30,52;UBERON:0007135,4.15e-30,52;UBERON:0002346,5.70e-29,64;UBERON:0003075,5.70e-29,64;UBERON:0007284,5.70e-29,64;UBERON:0001016,2.25e-28,75;UBERON:0001017,1.52e-27,73;UBERON:0000955,5.41e-26,47;UBERON:0006238,5.41e-26,47;UBERON:0002616,5.23e-25,46;UBERON:0004121,2.50e-24,95;UBERON:0000924,2.50e-24,95;UBERON:0006601,2.50e-24,95;UBERON:0010371,4.23e-23,73;UBERON:0003056,8.88e-23,49;UBERON:0003080,1.12e-21,40;UBERON:0002780,9.52e-21,39;UBERON:0001890,9.52e-21,39;UBERON:0006240,9.52e-21,39;UBERON:0002020,1.89e-20,34;UBERON:0010314,2.21e-18,92;UBERON:0003528,1.60e-16,29;UBERON:0002791,1.60e-16,29;UBERON:0001893,1.60e-16,29;UBERON:0002021,5.83e-12,10;UBERON:0000411,5.83e-12,10;UBERON:0001950,5.83e-12,10;UBERON:0000956,5.09e-11,21;UBERON:0001869,5.09e-11,21;UBERON:0000203,5.09e-11,21;UBERON:0002619,2.16e-09,17;UBERON:0003076,8.42e-09,12;UBERON:0003057,8.42e-09,12;UBERON:0002420,7.27e-07,8;UBERON:0007245,7.27e-07,8;UBERON:0010009,7.27e-07,8;UBERON:0010011,7.27e-07,8;UBERON:0000454,7.27e-07,8 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,30.1053247134787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,0,0.219686182734472,0.194429899074283,1.39986421625363,0,0,0,0,0,0,0,3.84401275633236,8.99284664762456,5.70448263155561,0,0.889294796111139,0,0.988866362566974,0,0.299600110518405,0.768436610643109,2.07379224616955,1.21505344498522,1.05162480675691,16.2821061110168,17.6694832761291,2.44981598429908,0.766763768145891,0,49.5521464497249,75.4632168083459,56.8344173048101,2.76961204233407,5.03182039813253,6.25096044668112,27.6391169011367,48.9603470727562,50.1178252707937,30.9360014747351,46.1284245789094,11.3703661953433,2.49896437999507,1.5870027622425,0.289864488701678,0,0,0.539703191637817,0,0,5.05599912474307,0,0,0,0.985903938436763,0,0,0,0,0,0,2.8545969929765,0,6.82833839698194,0,0,0.691846491768175,0.452167921657868,1.05829836422134,1.0053327306374,0,0.144599356919912,0,0,0,0,0,157.808849589224,168.814045691645,0,0,0,0,95.2668466614672,97.9051290031861,8.16753288733619,204.765049186502,229.888196139967,83.9463700020623,118.111639513328,0.101839363850316,0,0,15.1518136238261,0.260240885925407,0.919608417733892,0.540186389416048,1.80845781402858,2.9255694635071,6.02134485338794,3.65436725782942,52.2580808892812,0,0,0,0.657587197282725,0.556094498451196,0,0,0,0,0,0,0,0,1.08037236876609,0.473489471170421,0.983821158737019,0.925602677324269,1.16266972375204,0.804820204198858,0.467061369468678,0,0,0.162137619091711,0,0,0,184.003704993611,21.4041593748912,0,0.264450566663544,0,0.696710015581316,0,0,0.22237804384487,0,0.474529061544512,0,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0.210407459670956,0,0.295220295959204,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,57.4771112156295,55.6755511312965,0,0,0.315508219416257,0,0.430846795465598,0,0,0.566153061577665,0,0.292255857911312,1.97643888973262,147.807805554031,0,0,0.162886959353576,0,1.32745138339963,0.242780636154981,0,0,0,0.307435147943927,0.775284879504663,0,0.356497378384721,0,0,0,18.7241783164583,0.18006109403131,0.258717367565509,1.71469628025274,7.80297028026004,28.7173796339334,30.9352158731987,11.8741330154694,0,0,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0,0.582961673259701,43.5749459724698,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0.944050424693745,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0.13020438484395,0.419437377702843,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0,0.100826185136841,0.194915761479505,0,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,223.076977833741,264.22668575512,215.981608566653,204.848993353676,306.916968857248,290.826650495035,267.983932592027,305.317775786021,302.699129201449,247.48942901737,0.103787347584177,0.798049746802062,1.36586884603307,2.43106717068294,1.25767897576789,3.8607136774503,3.55594764482584,4.32673620201678,6.4183841918363,5.30664144703975,5.83002389747551,5.47016390019621,3.83930180626518,4.54578582074572,5.34149861287203,5.71552429539688,5.2147946675185,4.43691207066522,3.29668720642645,4.71036544430071,6.51451579532289,4.08194354166476,3.09967046931517,4.50573891560218,5.36423468367385,4.3153450024755,4.57319932181931,5.26139422875686,5.56796866768033,3.36685362994643,3.79632057997357,3.54616136552028,4.91077251803627,3.25367366490529,4.05103883060397,5.24602213669686,3.74290573512653,5.37177635120746,3.82576664137687,1.98532277207564,0.927471342481686 | |||
|short_description=p1@Slc4a10 | |||
}} |
Revision as of 07:44, 5 August 2015
Short description: | p1@Slc4a10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc4a10_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_NM_001242378, NM_001242379, NM_001242380, NM_001242381, NM_001242382, NM_001242383, NM_033552, uc008jve.2, uc008jvf.2, uc012bvu.1, uc012bvv.1, uc012bvw.1, uc012bvx.1_5end |
EntrezGene: | 94229 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.58e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.58e-12 | 23 |
neuron | 2.41e-07 | 33 |
neuronal stem cell | 2.41e-07 | 33 |
neuroblast | 2.41e-07 | 33 |
electrically signaling cell | 2.41e-07 | 33 |