FFCP PHASE1:Mm9::chr15:6824301..6824306,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=18414|HGNC=|MCL_coexpression_id=98|UniProt=G3X8V6,O70458,Q3TRK8|association_with_transcript=6bp_to_ENSMUST00000022746,NM_011019,uc007vdt.2,uc007vdu.2,uc007vdv.2,uc011zrc.1_5end|description=CAGE_peak_5_at_Osmr_5end|id=chr15:6824301..6824306,-|ontology_enrichment_celltype=CL:0000222!3.54e-07!7|ontology_enrichment_celltype_v019_2=CL:0000222,6.01e-40,7;CL:0000680,1.70e-34,6;CL:0000187,1.70e-34,6;CL:0000056,1.70e-34,6;CL:0000355,6.51e-23,9;CL:0002494,3.30e-18,3;CL:0000737,3.30e-18,3;CL:0000746,3.30e-18,3;CL:0000513,3.30e-18,3;CL:0000192,6.33e-18,3;CL:0000359,6.33e-18,3;CL:0002539,6.33e-18,3;CL:0000514,6.33e-18,3;CL:0000213,4.68e-07,1;CL:0002078,4.68e-07,1;CL:0000115,4.68e-07,1;CL:0002262,4.68e-07,1;CL:1000398,4.68e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004872!3.23e-10!33;UBERON:0004535!5.85e-08!23;UBERON:0001009!5.85e-08!23|ontology_enrichment_uberon_v019_2=UBERON:0001134,6.51e-23,9;UBERON:0002036,6.51e-23,9;UBERON:0002385,6.51e-23,9;UBERON:0000486,6.51e-23,9;UBERON:0007503,6.51e-23,9;UBERON:0001015,6.51e-23,9;UBERON:0002329,6.51e-23,9;UBERON:0003082,6.51e-23,9;UBERON:0003059,6.51e-23,9;UBERON:0007282,6.51e-23,9;UBERON:0004290,6.51e-23,9;UBERON:0009618,6.51e-23,9;UBERON:0000383,1.36e-20,10;UBERON:0000055,1.02e-18,5;UBERON:0007500,1.02e-18,5;UBERON:0001981,1.02e-18,5;UBERON:0002049,1.02e-18,5;UBERON:0007798,1.02e-18,5;UBERON:0004537,1.02e-18,5;UBERON:0006965,1.02e-18,5;UBERON:0007524,1.08e-18,11;UBERON:0003077,1.08e-18,11;UBERON:0007285,1.08e-18,11;UBERON:0001135,6.33e-18,3;UBERON:0004237,6.33e-18,3;UBERON:0004695,6.33e-18,3;UBERON:0002111,6.33e-18,3;UBERON:0004178,6.33e-18,3;UBERON:0000947,1.36e-13,4;UBERON:0001637,1.36e-13,4;UBERON:0004573,1.36e-13,4;UBERON:0003509,1.36e-13,4;UBERON:0004571,1.36e-13,4;UBERON:0010191,1.36e-13,4;UBERON:0004572,1.36e-13,4;UBERON:0004535,9.40e-12,23;UBERON:0001009,9.40e-12,23;UBERON:0002204,3.48e-08,32;UBERON:0004872,5.54e-08,33;UBERON:0002394,4.68e-07,1;UBERON:0001281,4.68e-07,1;UBERON:0000353,4.68e-07,1;UBERON:0003497,4.68e-07,1;UBERON:0003909,4.68e-07,1;UBERON:0003928,4.68e-07,1;UBERON:0003835,4.68e-07,1;UBERON:0003513,4.68e-07,1;UBERON:0001280,4.68e-07,1;UBERON:0004647,4.68e-07,1;UBERON:0002294,4.68e-07,1;UBERON:0001173,4.68e-07,1;UBERON:0004912,4.68e-07,1;UBERON:0005171,4.68e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0.340173160604279,0.0992909512008853,0,0,0.22940928106717,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.15459499319405,4.25783111121961,2.75320128242522,0,0,0.219686182734472,2.13872888981712,0.699932108126813,0,0,0,0,4.3734104126111,2.86533439938757,5.15672092277442,0,0,0.633831403506179,1.0165335962074,0.889294796111139,0,0,1.4209602298922,0.299600110518405,0,0.103689612308478,0.135005938331691,0,0.285650984403804,0,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0.46081959976873,0,0,0.52091337055676,0.279182999001381,0,0.15279824777681,0,0.142371680799103,0,0.227178579999552,0.377857800533928,2.89864488701678,0.860423876981386,0,0,0,0,0,1.1930122580464,0.259786004602869,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0.445326417194474,0.173485326766136,0,0,0.301445281105245,0.352766121407114,0.251333182659351,0.741584903203122,0.578397427679647,0,0.323533699894818,0.220841518460394,0.969750506270444,0,0,0,0,0,0,0,0,0.915001205637253,0.125654352112864,0,0,0,0.486723789203273,0.305518091550949,0.373220911830279,0.252722758433675,0.420883711772948,0,0,0,0,0.476255494059295,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0,0.43839146485515,0,0,0.61734640922383,0,0,0,0,0,0,0.900310307305074,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0.233530684734339,0.16455984991348,0.656669856316381,0.810688095458557,0.730999937126662,0.219550115291051,0.805238512562231,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0.329397909448022,0.251335208800269,0.596869416123452,0,0,0,0.796565093017469,0,0,0,0,0.193952487167626,0.0701358198903186,0.126473074248515,0,0.470996183524124,0.246794327843601,0,0,0,0,0,0,0.50925170356284,0,0.324270453550071,0.274561413188081,0,0,0,0,0,0,0.554259570499814,0.189491411770485,0,0.169745085775188,0,0.670025029767263,0,0.195133647857799,0.315270288212382,0.44292937929755,0.478364305972461,0.983179888294428,0.690739927463582,2.31438493730419,0,0,0.491764273019036,0.551873492609465,0,0.234423373184406,0.163934945376675,0.504941854408746,0.315508219416257,0,0,0,0,0,0.404810701674894,0.292255857911312,0,0.321321316421807,0.283880170416537,0,0,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,1.05418608574999,0,1.02131881726136,0,0,0,0,0.178368817602071,0.164549020602121,0.304464949114599,0.23467170806371,0.42366414172764,0,0.49465875882444,0.645857706783622,0.120625849856312,0.716234064018819,0.164140899745061,0,0.18542530201051,0.512612642393558,0.206386867963223,0.555583582109135,0.376736914009382,0.410082683163076,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0,0.41326727862668,0.523511883968059,0.259229946583586,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0.104859344425711,0,0.288030006257865,0.316011120628178,0.202725215290164,0,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0.302899349844443,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,0,0.563047426353546,1.46521299413812,0.428736758158132,0.501572104035363,0,0,0,0.343706364687375,0,0,0,0,0.453142408984205,0,0,0,0.170733605754134,0,0,0,0.44449345560323,0,0.320919209591815,0,0,0,0.37456602987953,0.0640251524048693,0.114870937911227,0,0.231768651889711,0.38581844092741,0,0,0,0.354951612318675,0,0.436039249896986,0.376437521661322,0.0846146078916765,0.548783918618318,0,0.271608227691724,0,0.118635018124174,0,0,0.309873682371932,0,0.249810577937946,0.701794825336225,0.214871054048298,0.191288332068843,0.220591419119515,0|short_description=p5@Osmr}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18414 | |||
|HGNC= | |||
|MCL_coexpression_id=98 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G3X8V6,uniprot:O70458,uniprot:Q3TRK8 | |||
|association_with_transcript=6bp_to_ENSMUST00000022746,NM_011019,uc007vdt.2,uc007vdu.2,uc007vdv.2,uc011zrc.1_5end | |||
|cluster_id=chr15:6824301..6824306,- | |||
|description=CAGE_peak_5_at_Osmr_5end | |||
|id=chr15:6824301..6824306,- | |||
|ontology_enrichment_celltype=CL:0000222!3.54e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.01e-40,7;CL:0000680,1.70e-34,6;CL:0000187,1.70e-34,6;CL:0000056,1.70e-34,6;CL:0000355,6.51e-23,9;CL:0002494,3.30e-18,3;CL:0000737,3.30e-18,3;CL:0000746,3.30e-18,3;CL:0000513,3.30e-18,3;CL:0000192,6.33e-18,3;CL:0000359,6.33e-18,3;CL:0002539,6.33e-18,3;CL:0000514,6.33e-18,3;CL:0000213,4.68e-07,1;CL:0002078,4.68e-07,1;CL:0000115,4.68e-07,1;CL:0002262,4.68e-07,1;CL:1000398,4.68e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!3.23e-10!33;UBERON:0004535!5.85e-08!23;UBERON:0001009!5.85e-08!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,6.51e-23,9;UBERON:0002036,6.51e-23,9;UBERON:0002385,6.51e-23,9;UBERON:0000486,6.51e-23,9;UBERON:0007503,6.51e-23,9;UBERON:0001015,6.51e-23,9;UBERON:0002329,6.51e-23,9;UBERON:0003082,6.51e-23,9;UBERON:0003059,6.51e-23,9;UBERON:0007282,6.51e-23,9;UBERON:0004290,6.51e-23,9;UBERON:0009618,6.51e-23,9;UBERON:0000383,1.36e-20,10;UBERON:0000055,1.02e-18,5;UBERON:0007500,1.02e-18,5;UBERON:0001981,1.02e-18,5;UBERON:0002049,1.02e-18,5;UBERON:0007798,1.02e-18,5;UBERON:0004537,1.02e-18,5;UBERON:0006965,1.02e-18,5;UBERON:0007524,1.08e-18,11;UBERON:0003077,1.08e-18,11;UBERON:0007285,1.08e-18,11;UBERON:0001135,6.33e-18,3;UBERON:0004237,6.33e-18,3;UBERON:0004695,6.33e-18,3;UBERON:0002111,6.33e-18,3;UBERON:0004178,6.33e-18,3;UBERON:0000947,1.36e-13,4;UBERON:0001637,1.36e-13,4;UBERON:0004573,1.36e-13,4;UBERON:0003509,1.36e-13,4;UBERON:0004571,1.36e-13,4;UBERON:0010191,1.36e-13,4;UBERON:0004572,1.36e-13,4;UBERON:0004535,9.40e-12,23;UBERON:0001009,9.40e-12,23;UBERON:0002204,3.48e-08,32;UBERON:0004872,5.54e-08,33;UBERON:0002394,4.68e-07,1;UBERON:0001281,4.68e-07,1;UBERON:0000353,4.68e-07,1;UBERON:0003497,4.68e-07,1;UBERON:0003909,4.68e-07,1;UBERON:0003928,4.68e-07,1;UBERON:0003835,4.68e-07,1;UBERON:0003513,4.68e-07,1;UBERON:0001280,4.68e-07,1;UBERON:0004647,4.68e-07,1;UBERON:0002294,4.68e-07,1;UBERON:0001173,4.68e-07,1;UBERON:0004912,4.68e-07,1;UBERON:0005171,4.68e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0.340173160604279,0.0992909512008853,0,0,0.22940928106717,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.15459499319405,4.25783111121961,2.75320128242522,0,0,0.219686182734472,2.13872888981712,0.699932108126813,0,0,0,0,4.3734104126111,2.86533439938757,5.15672092277442,0,0,0.633831403506179,1.0165335962074,0.889294796111139,0,0,1.4209602298922,0.299600110518405,0,0.103689612308478,0.135005938331691,0,0.285650984403804,0,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0.46081959976873,0,0,0.52091337055676,0.279182999001381,0,0.15279824777681,0,0.142371680799103,0,0.227178579999552,0.377857800533928,2.89864488701678,0.860423876981386,0,0,0,0,0,1.1930122580464,0.259786004602869,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0.445326417194474,0.173485326766136,0,0,0.301445281105245,0.352766121407114,0.251333182659351,0.741584903203122,0.578397427679647,0,0.323533699894818,0.220841518460394,0.969750506270444,0,0,0,0,0,0,0,0,0.915001205637253,0.125654352112864,0,0,0,0.486723789203273,0.305518091550949,0.373220911830279,0.252722758433675,0.420883711772948,0,0,0,0,0.476255494059295,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0,0.43839146485515,0,0,0.61734640922383,0,0,0,0,0,0,0.900310307305074,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0.233530684734339,0.16455984991348,0.656669856316381,0.810688095458557,0.730999937126662,0.219550115291051,0.805238512562231,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0.329397909448022,0.251335208800269,0.596869416123452,0,0,0,0.796565093017469,0,0,0,0,0.193952487167626,0.0701358198903186,0.126473074248515,0,0.470996183524124,0.246794327843601,0,0,0,0,0,0,0.50925170356284,0,0.324270453550071,0.274561413188081,0,0,0,0,0,0,0.554259570499814,0.189491411770485,0,0.169745085775188,0,0.670025029767263,0,0.195133647857799,0.315270288212382,0.44292937929755,0.478364305972461,0.983179888294428,0.690739927463582,2.31438493730419,0,0,0.491764273019036,0.551873492609465,0,0.234423373184406,0.163934945376675,0.504941854408746,0.315508219416257,0,0,0,0,0,0.404810701674894,0.292255857911312,0,0.321321316421807,0.283880170416537,0,0,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,1.05418608574999,0,1.02131881726136,0,0,0,0,0.178368817602071,0.164549020602121,0.304464949114599,0.23467170806371,0.42366414172764,0,0.49465875882444,0.645857706783622,0.120625849856312,0.716234064018819,0.164140899745061,0,0.18542530201051,0.512612642393558,0.206386867963223,0.555583582109135,0.376736914009382,0.410082683163076,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0,0.41326727862668,0.523511883968059,0.259229946583586,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0.104859344425711,0,0.288030006257865,0.316011120628178,0.202725215290164,0,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0.302899349844443,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,0,0.563047426353546,1.46521299413812,0.428736758158132,0.501572104035363,0,0,0,0.343706364687375,0,0,0,0,0.453142408984205,0,0,0,0.170733605754134,0,0,0,0.44449345560323,0,0.320919209591815,0,0,0,0.37456602987953,0.0640251524048693,0.114870937911227,0,0.231768651889711,0.38581844092741,0,0,0,0.354951612318675,0,0.436039249896986,0.376437521661322,0.0846146078916765,0.548783918618318,0,0.271608227691724,0,0.118635018124174,0,0,0.309873682371932,0,0.249810577937946,0.701794825336225,0.214871054048298,0.191288332068843,0.220591419119515,0 | |||
|short_description=p5@Osmr | |||
}} |
Revision as of 10:07, 5 August 2015
Short description: | p5@Osmr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Osmr_5end |
Coexpression cluster: | MCL_coexpression_mm9:98 |
Association with transcript: | 6bp_to_ENSMUST00000022746, NM_011019, uc007vdt.2, uc007vdu.2, uc007vdv.2, uc011zrc.1_5end |
EntrezGene: | 18414 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.01e-40 | 7 |
muscle precursor cell | 1.70e-34 | 6 |
muscle cell | 1.70e-34 | 6 |
myoblast | 1.70e-34 | 6 |
multi-potent skeletal muscle stem cell | 6.51e-23 | 9 |
cardiocyte | 3.30e-18 | 3 |
striated muscle cell | 3.30e-18 | 3 |
cardiac muscle cell | 3.30e-18 | 3 |
cardiac muscle myoblast | 3.30e-18 | 3 |
smooth muscle cell | 6.33e-18 | 3 |
vascular associated smooth muscle cell | 6.33e-18 | 3 |
aortic smooth muscle cell | 6.33e-18 | 3 |
smooth muscle myoblast | 6.33e-18 | 3 |
lining cell | 4.68e-07 | 1 |
meso-epithelial cell | 4.68e-07 | 1 |
endothelial cell | 4.68e-07 | 1 |
endothelial cell of sinusoid | 4.68e-07 | 1 |
endothelial cell of hepatic sinusoid | 4.68e-07 | 1 |