FFCP PHASE1:Mm9::chr18:35374730..35374784,+: Difference between revisions
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{{FFCP|EntrezGene=12385|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=156bp_to_uc008emb.1_5end|description=CAGE_peak_4_at_Ctnna1_5end|id=chr18:35374730..35374784,+|ontology_enrichment_celltype=CL:0000117!1.75e-15!23;CL:0000337!1.75e-15!23;CL:0000540!4.97e-15!33;CL:0000047!4.97e-15!33;CL:0000031!4.97e-15!33;CL:0000404!4.97e-15!33;CL:0000393!4.83e-11!39;CL:0000211!4.83e-11!39;CL:0000221!3.34e-10!44;CL:0000133!3.34e-10!44;CL:0002319!6.43e-10!43;CL:0000055!3.82e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,4.79e-14,23;CL:0000337,4.79e-14,23;CL:0000540,1.07e-08,33;CL:0000047,1.07e-08,33;CL:0000031,1.07e-08,33;CL:0000404,1.07e-08,33;CL:0002610,2.12e-07,3;CL:0000393,7.80e-07,39;CL:0000211,7.80e-07,39;CL:0002614,9.31e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!6.88e-30!63;UBERON:0001017!1.12e-29!73;UBERON:0005743!1.12e-29!73;UBERON:0000073!1.74e-29!75;UBERON:0001016!1.74e-29!75;UBERON:0002346!1.77e-29!71;UBERON:0003075!1.77e-29!71;UBERON:0007284!1.77e-29!71;UBERON:0004121!1.46e-28!102;UBERON:0000924!1.46e-28!102;UBERON:0006601!1.46e-28!102;UBERON:0000955!3.84e-27!50;UBERON:0006238!3.84e-27!50;UBERON:0001049!1.64e-26!52;UBERON:0005068!1.64e-26!52;UBERON:0006241!1.64e-26!52;UBERON:0007135!1.64e-26!52;UBERON:0003056!2.73e-26!49;UBERON:0002616!2.80e-26!49;UBERON:0003080!1.58e-21!40;UBERON:0002020!9.12e-21!34;UBERON:0002780!1.46e-20!39;UBERON:0001890!1.46e-20!39;UBERON:0006240!1.46e-20!39;UBERON:0002791!9.44e-19!29;UBERON:0003528!9.44e-19!29;UBERON:0001893!9.44e-19!29;UBERON:0007811!7.05e-17!86;UBERON:0000153!5.35e-15!94;UBERON:0000956!8.95e-13!21;UBERON:0001869!8.95e-13!21;UBERON:0000203!8.95e-13!21;UBERON:0002619!3.13e-10!17;UBERON:0002021!2.49e-09!10;UBERON:0000411!2.49e-09!10;UBERON:0001950!2.49e-09!10;UBERON:0002420!2.99e-07!8;UBERON:0007245!2.99e-07!8;UBERON:0010009!2.99e-07!8;UBERON:0010011!2.99e-07!8;UBERON:0000454!2.99e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.52e-42,64;UBERON:0003075,5.52e-42,64;UBERON:0007284,5.52e-42,64;UBERON:0003056,5.09e-40,49;UBERON:0000073,6.89e-40,54;UBERON:0000955,2.09e-38,47;UBERON:0006238,2.09e-38,47;UBERON:0002616,8.81e-37,46;UBERON:0001049,4.41e-36,52;UBERON:0005068,4.41e-36,52;UBERON:0006241,4.41e-36,52;UBERON:0007135,4.41e-36,52;UBERON:0004121,1.25e-35,95;UBERON:0000924,1.25e-35,95;UBERON:0006601,1.25e-35,95;UBERON:0010371,1.45e-35,73;UBERON:0001017,1.76e-34,73;UBERON:0001016,2.71e-33,75;UBERON:0003080,6.81e-32,40;UBERON:0003528,1.17e-30,29;UBERON:0002791,1.17e-30,29;UBERON:0001893,1.17e-30,29;UBERON:0002780,4.54e-30,39;UBERON:0001890,4.54e-30,39;UBERON:0006240,4.54e-30,39;UBERON:0002020,2.20e-27,34;UBERON:0010314,3.92e-26,92;UBERON:0000956,4.09e-21,21;UBERON:0001869,4.09e-21,21;UBERON:0000203,4.09e-21,21;UBERON:0002619,2.67e-18,17;UBERON:0002021,1.71e-17,10;UBERON:0000411,1.71e-17,10;UBERON:0001950,1.71e-17,10;UBERON:0000025,1.32e-11,114;UBERON:0002420,1.59e-10,8;UBERON:0007245,1.59e-10,8;UBERON:0010009,1.59e-10,8;UBERON:0010011,1.59e-10,8;UBERON:0000454,1.59e-10,8;UBERON:0004111,2.81e-10,122;UBERON:0000483,4.51e-09,174;UBERON:0000119,7.42e-09,176;UBERON:0002950,1.04e-08,4;UBERON:0001891,1.04e-08,4;UBERON:0009616,1.04e-08,4;UBERON:0010286,1.04e-08,4;UBERON:0000970,2.13e-08,9;UBERON:0000019,2.13e-08,9;UBERON:0000047,2.13e-08,9;UBERON:0010312,2.13e-08,9;UBERON:0004088,2.13e-08,9;UBERON:0002104,2.13e-08,9;UBERON:0001456,2.13e-08,9;UBERON:0003072,2.13e-08,9;UBERON:0004128,2.13e-08,9;UBERON:0003071,2.13e-08,9;UBERON:0004684,2.12e-07,3;UBERON:0002275,2.12e-07,3;UBERON:0011216,9.01e-07,194;UBERON:0002038,9.31e-07,3;UBERON:0009663,9.31e-07,3;UBERON:0009661,9.31e-07,3;UBERON:0000125,9.31e-07,3;UBERON:0002308,9.31e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,1.05798195854407,1.26766280701236,0,0,0,0,0.7104801149461,0,0,1.65903379693564,0.810035629990144,1.05162480675691,0.285650984403804,0.662605622854841,1.71487118900936,0.575072826109418,1.83843757322004,16.5173821499083,11.3641730895817,14.5926206593431,0.923204014111357,1.73826522844578,2.08365348222704,8.37548997004143,10.6924895906019,7.48711414106369,0.294628585473668,1.13897344639282,0.372798891650601,0,0.529000920747499,0,0,0,0,0,0,0.842666520790511,0,0,0,0.281686839553361,0,0,0,0,0,0,0.5709193985953,0,0,0.346970653532272,0.304465478312141,0,0.452167921657868,0.117588707135705,0,0,0,0,0,0,0,0,10.2473278954042,10.0534419270458,0.255457055208591,0,0,0.127070227073065,14.6794826616726,7.77751024791665,1.50785222535437,8.34356736922927,9.46147192122223,11.2205544062162,8.4365456795234,0,0,0,1.05220927943237,0,0.459804208866946,1.98068342785884,1.80845781402858,3.94611695077702,2.3060469651273,2.43624483855295,3.3631438196072,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0.702213187313235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6263788684108,1.85228302282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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12385 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=156bp_to_uc008emb.1_5end | |||
|cluster_id=chr18:35374730..35374784,+ | |||
|description=CAGE_peak_4_at_Ctnna1_5end | |||
|id=chr18:35374730..35374784,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.75e-15!23;CL:0000337!1.75e-15!23;CL:0000540!4.97e-15!33;CL:0000047!4.97e-15!33;CL:0000031!4.97e-15!33;CL:0000404!4.97e-15!33;CL:0000393!4.83e-11!39;CL:0000211!4.83e-11!39;CL:0000221!3.34e-10!44;CL:0000133!3.34e-10!44;CL:0002319!6.43e-10!43;CL:0000055!3.82e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.79e-14,23;CL:0000337,4.79e-14,23;CL:0000540,1.07e-08,33;CL:0000047,1.07e-08,33;CL:0000031,1.07e-08,33;CL:0000404,1.07e-08,33;CL:0002610,2.12e-07,3;CL:0000393,7.80e-07,39;CL:0000211,7.80e-07,39;CL:0002614,9.31e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!6.88e-30!63;UBERON:0001017!1.12e-29!73;UBERON:0005743!1.12e-29!73;UBERON:0000073!1.74e-29!75;UBERON:0001016!1.74e-29!75;UBERON:0002346!1.77e-29!71;UBERON:0003075!1.77e-29!71;UBERON:0007284!1.77e-29!71;UBERON:0004121!1.46e-28!102;UBERON:0000924!1.46e-28!102;UBERON:0006601!1.46e-28!102;UBERON:0000955!3.84e-27!50;UBERON:0006238!3.84e-27!50;UBERON:0001049!1.64e-26!52;UBERON:0005068!1.64e-26!52;UBERON:0006241!1.64e-26!52;UBERON:0007135!1.64e-26!52;UBERON:0003056!2.73e-26!49;UBERON:0002616!2.80e-26!49;UBERON:0003080!1.58e-21!40;UBERON:0002020!9.12e-21!34;UBERON:0002780!1.46e-20!39;UBERON:0001890!1.46e-20!39;UBERON:0006240!1.46e-20!39;UBERON:0002791!9.44e-19!29;UBERON:0003528!9.44e-19!29;UBERON:0001893!9.44e-19!29;UBERON:0007811!7.05e-17!86;UBERON:0000153!5.35e-15!94;UBERON:0000956!8.95e-13!21;UBERON:0001869!8.95e-13!21;UBERON:0000203!8.95e-13!21;UBERON:0002619!3.13e-10!17;UBERON:0002021!2.49e-09!10;UBERON:0000411!2.49e-09!10;UBERON:0001950!2.49e-09!10;UBERON:0002420!2.99e-07!8;UBERON:0007245!2.99e-07!8;UBERON:0010009!2.99e-07!8;UBERON:0010011!2.99e-07!8;UBERON:0000454!2.99e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.52e-42,64;UBERON:0003075,5.52e-42,64;UBERON:0007284,5.52e-42,64;UBERON:0003056,5.09e-40,49;UBERON:0000073,6.89e-40,54;UBERON:0000955,2.09e-38,47;UBERON:0006238,2.09e-38,47;UBERON:0002616,8.81e-37,46;UBERON:0001049,4.41e-36,52;UBERON:0005068,4.41e-36,52;UBERON:0006241,4.41e-36,52;UBERON:0007135,4.41e-36,52;UBERON:0004121,1.25e-35,95;UBERON:0000924,1.25e-35,95;UBERON:0006601,1.25e-35,95;UBERON:0010371,1.45e-35,73;UBERON:0001017,1.76e-34,73;UBERON:0001016,2.71e-33,75;UBERON:0003080,6.81e-32,40;UBERON:0003528,1.17e-30,29;UBERON:0002791,1.17e-30,29;UBERON:0001893,1.17e-30,29;UBERON:0002780,4.54e-30,39;UBERON:0001890,4.54e-30,39;UBERON:0006240,4.54e-30,39;UBERON:0002020,2.20e-27,34;UBERON:0010314,3.92e-26,92;UBERON:0000956,4.09e-21,21;UBERON:0001869,4.09e-21,21;UBERON:0000203,4.09e-21,21;UBERON:0002619,2.67e-18,17;UBERON:0002021,1.71e-17,10;UBERON:0000411,1.71e-17,10;UBERON:0001950,1.71e-17,10;UBERON:0000025,1.32e-11,114;UBERON:0002420,1.59e-10,8;UBERON:0007245,1.59e-10,8;UBERON:0010009,1.59e-10,8;UBERON:0010011,1.59e-10,8;UBERON:0000454,1.59e-10,8;UBERON:0004111,2.81e-10,122;UBERON:0000483,4.51e-09,174;UBERON:0000119,7.42e-09,176;UBERON:0002950,1.04e-08,4;UBERON:0001891,1.04e-08,4;UBERON:0009616,1.04e-08,4;UBERON:0010286,1.04e-08,4;UBERON:0000970,2.13e-08,9;UBERON:0000019,2.13e-08,9;UBERON:0000047,2.13e-08,9;UBERON:0010312,2.13e-08,9;UBERON:0004088,2.13e-08,9;UBERON:0002104,2.13e-08,9;UBERON:0001456,2.13e-08,9;UBERON:0003072,2.13e-08,9;UBERON:0004128,2.13e-08,9;UBERON:0003071,2.13e-08,9;UBERON:0004684,2.12e-07,3;UBERON:0002275,2.12e-07,3;UBERON:0011216,9.01e-07,194;UBERON:0002038,9.31e-07,3;UBERON:0009663,9.31e-07,3;UBERON:0009661,9.31e-07,3;UBERON:0000125,9.31e-07,3;UBERON:0002308,9.31e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,1.05798195854407,1.26766280701236,0,0,0,0,0.7104801149461,0,0,1.65903379693564,0.810035629990144,1.05162480675691,0.285650984403804,0.662605622854841,1.71487118900936,0.575072826109418,1.83843757322004,16.5173821499083,11.3641730895817,14.5926206593431,0.923204014111357,1.73826522844578,2.08365348222704,8.37548997004143,10.6924895906019,7.48711414106369,0.294628585473668,1.13897344639282,0.372798891650601,0,0.529000920747499,0,0,0,0,0,0,0.842666520790511,0,0,0,0.281686839553361,0,0,0,0,0,0,0.5709193985953,0,0,0.346970653532272,0.304465478312141,0,0.452167921657868,0.117588707135705,0,0,0,0,0,0,0,0,10.2473278954042,10.0534419270458,0.255457055208591,0,0,0.127070227073065,14.6794826616726,7.77751024791665,1.50785222535437,8.34356736922927,9.46147192122223,11.2205544062162,8.4365456795234,0,0,0,1.05220927943237,0,0.459804208866946,1.98068342785884,1.80845781402858,3.94611695077702,2.3060469651273,2.43624483855295,3.3631438196072,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0.702213187313235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6263788684108,1.85228302282712,0,0,0,0,0,0,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,7.38532713943843,9.37693492737625,0,0,0,0,0.646270193198397,0.238968797952552,0.222798674082394,0.283076530788832,0.809621403349789,0.292255857911312,0.395287777946524,5.46246237917072,0,0,0,0,0,0,0.302323556964751,0,0,0,0.516856586336442,0.363533729477506,0,0,0,0,1.36175842301515,0.18006109403131,0.129358683782755,0.214337035031592,0.532020700926821,1.07021290561242,0,0,0,0.21183207086382,0,0,0,0,0,0,0,8.52956389248344,0,0.206386867963223,0,0,0,0,0.169978429993855,0.559805809294632,0.276399947608848,0,0,0.203319467126849,0,0,0,0.269728692769641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,2.76195141904306,2.86447756719698,2.92150409984269,4.11049511862385,6.0431511791176,8.10027000278167,13.9599572999508,11.3285602246051,4.65984280576638,0.31136204275253,0.399024873401031,0,0,1.04806581313991,0.367687016900028,0.222246727801615,0.206035057238894,0.320919209591815,0.758091635291392,0,0.188626341386076,0.37456602987953,0.384150914429216,0.229741875822453,0.476293691283074,0.463537303779422,0.192909220463705,0,0.588795680537589,0,0,0.476872379894642,0.145346416632329,0.376437521661322,0.592302255241736,0,0.263069711437843,0.271608227691724,0.561142271657738,0.593175090620871,0.689531376628944,0,0.464810523557898,0.192906610981141,0.999242311751784,0.233931608445408,0,0,0,0 | |||
|short_description=p4@Ctnna1 | |||
}} |
Revision as of 16:32, 5 August 2015
Short description: | p4@Ctnna1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ctnna1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 156bp_to_uc008emb.1_5end |
EntrezGene: | 12385 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.79e-14 | 23 |
neuroblast (sensu Vertebrata) | 4.79e-14 | 23 |
neuron | 1.07e-08 | 33 |
neuronal stem cell | 1.07e-08 | 33 |
neuroblast | 1.07e-08 | 33 |
electrically signaling cell | 1.07e-08 | 33 |
raphe nuclei neuron | 2.12e-07 | 3 |
electrically responsive cell | 7.80e-07 | 39 |
electrically active cell | 7.80e-07 | 39 |
neuron of the substantia nigra | 9.31e-07 | 3 |