FFCP PHASE1:Mm9::chr1:75275016..75275030,-: Difference between revisions
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{{FFCP|EntrezGene=19711|HGNC=|MCL_coexpression_id=556|UniProt=P47939|association_with_transcript=-26bp_to_ENSMUST00000039534_5end|description=CAGE_peak_2_at_Resp18_5end|id=chr1:75275016..75275030,-|ontology_enrichment_celltype=CL:0000117!1.51e-11!23;CL:0000337!1.51e-11!23;CL:0000540!2.15e-08!33;CL:0000047!2.15e-08!33;CL:0000031!2.15e-08!33;CL:0000404!2.15e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,9.57e-21,23;CL:0000337,9.57e-21,23;CL:0000540,3.08e-13,33;CL:0000047,3.08e-13,33;CL:0000031,3.08e-13,33;CL:0000404,3.08e-13,33;CL:0000393,1.34e-10,39;CL:0000211,1.34e-10,39;CL:0002319,2.94e-09,43;CL:0000221,5.82e-09,44;CL:0000133,5.82e-09,44;CL:0002614,3.43e-08,3;CL:0002610,8.67e-08,3;CL:0002612,7.77e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.32e-31!71;UBERON:0003075!2.32e-31!71;UBERON:0007284!2.32e-31!71;UBERON:0001049!1.41e-25!52;UBERON:0005068!1.41e-25!52;UBERON:0006241!1.41e-25!52;UBERON:0007135!1.41e-25!52;UBERON:0001017!6.07e-25!73;UBERON:0005743!6.07e-25!73;UBERON:0000073!1.65e-24!75;UBERON:0001016!1.65e-24!75;UBERON:0004121!2.39e-24!102;UBERON:0000924!2.39e-24!102;UBERON:0006601!2.39e-24!102;UBERON:0000955!8.01e-24!50;UBERON:0006238!8.01e-24!50;UBERON:0002616!4.84e-23!49;UBERON:0000033!1.52e-21!63;UBERON:0003080!4.49e-19!40;UBERON:0003056!1.61e-18!49;UBERON:0002780!3.62e-18!39;UBERON:0001890!3.62e-18!39;UBERON:0006240!3.62e-18!39;UBERON:0002020!1.03e-15!34;UBERON:0007811!3.45e-12!86;UBERON:0002791!1.10e-11!29;UBERON:0003528!1.10e-11!29;UBERON:0001893!1.10e-11!29;UBERON:0000153!9.21e-10!94;UBERON:0002021!7.23e-09!10;UBERON:0000411!7.23e-09!10;UBERON:0001950!7.23e-09!10;UBERON:0001894!8.36e-08!10;UBERON:0006222!8.36e-08!10;UBERON:0002420!8.98e-08!8;UBERON:0007245!8.98e-08!8;UBERON:0010009!8.98e-08!8;UBERON:0010011!8.98e-08!8;UBERON:0000454!8.98e-08!8;UBERON:0002298!3.71e-07!6;UBERON:0003076!4.74e-07!12;UBERON:0003057!4.74e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.35e-44,54;UBERON:0001049,1.70e-40,52;UBERON:0005068,1.70e-40,52;UBERON:0006241,1.70e-40,52;UBERON:0007135,1.70e-40,52;UBERON:0001017,2.78e-39,73;UBERON:0001016,5.26e-38,75;UBERON:0002346,2.13e-31,64;UBERON:0003075,2.13e-31,64;UBERON:0007284,2.13e-31,64;UBERON:0000955,2.85e-31,47;UBERON:0006238,2.85e-31,47;UBERON:0002616,9.62e-30,46;UBERON:0003080,1.37e-29,40;UBERON:0004121,3.50e-28,95;UBERON:0000924,3.50e-28,95;UBERON:0006601,3.50e-28,95;UBERON:0002780,9.53e-28,39;UBERON:0001890,9.53e-28,39;UBERON:0006240,9.53e-28,39;UBERON:0002020,1.63e-27,34;UBERON:0010371,1.54e-26,73;UBERON:0010314,1.07e-23,92;UBERON:0003056,5.91e-23,49;UBERON:0003528,5.08e-19,29;UBERON:0002791,5.08e-19,29;UBERON:0001893,5.08e-19,29;UBERON:0002021,8.19e-15,10;UBERON:0000411,8.19e-15,10;UBERON:0001950,8.19e-15,10;UBERON:0000025,4.17e-14,114;UBERON:0002240,5.27e-13,6;UBERON:0005174,5.27e-13,6;UBERON:0001137,5.27e-13,6;UBERON:0004111,1.17e-12,122;UBERON:0002420,2.57e-12,8;UBERON:0007245,2.57e-12,8;UBERON:0010009,2.57e-12,8;UBERON:0010011,2.57e-12,8;UBERON:0000454,2.57e-12,8;UBERON:0001948,4.29e-11,5;UBERON:0002315,4.29e-11,5;UBERON:0003076,8.79e-11,12;UBERON:0003057,8.79e-11,12;UBERON:0002950,3.01e-10,4;UBERON:0001891,3.01e-10,4;UBERON:0009616,3.01e-10,4;UBERON:0010286,3.01e-10,4;UBERON:0002619,5.75e-10,17;UBERON:0001894,1.47e-09,10;UBERON:0006222,1.47e-09,10;UBERON:0000956,1.51e-09,21;UBERON:0001869,1.51e-09,21;UBERON:0000203,1.51e-09,21;UBERON:0011216,2.73e-09,194;UBERON:0002038,3.43e-08,3;UBERON:0009663,3.43e-08,3;UBERON:0009661,3.43e-08,3;UBERON:0000125,3.43e-08,3;UBERON:0002308,3.43e-08,3;UBERON:0004684,8.67e-08,3;UBERON:0002275,8.67e-08,3;UBERON:0002257,7.77e-07,3|phase1_expression=0,0,0,0.30246421130683,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,2.64495489636016,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0,12.5686433137674,8.1721360152097,0.244981598429908,0,0,7.70811166995721,7.53355294702608,9.5236050618871,1.18697658957174,2.28719109006024,1.04182674111352,13.6799669510677,23.0732670112989,12.2238598221448,3.83017161115768,5.12538050876771,2.05039390407831,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,1.38788261412909,1.52232739156071,0.461230994512117,1.20578112442098,0.587943535678524,0.753999547978053,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0.510914110417183,0,0,0,7.78911324905078,2.28750301409313,0.879580464790051,7.30062144807561,4.34716277461562,8.10373373782284,6.32740925964255,0,0,0,0.420883711772948,0,0.229902104433473,0.180062129805349,0.150704817835715,0.204109497453984,0,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,0.102904612379284,0,0,0.213288250535234,0.464473343720877,0,0,0,0,0.474529061544512,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.22477654945064,6.79827782234778,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0,0,0,0,0,0,1.92792789853084,0,0,0,0,0,0.242780636154981,0.302323556964751,0.565815239267694,0,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,0,0,13.9580238359053,0.18006109403131,0.258717367565509,0.428674070063185,1.59606210278046,1.78368817602071,2.79733335023606,1.8267896946876,0,0,0,0,0,0,0,0,0,6.30446026835733,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0.269728692769641,0.165306911450672,0.523511883968059,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,1.6942555278512,0.920650473014354,1.14579102687879,1.03111909406213,2.05524755931193,4.5323633843382,4.05013500139084,3.15224842256954,4.98456649882625,5.1776031175182,0,0,0.341467211508268,0,0,0,0.222246727801615,0,0,0,0,0.377252682772152,0.280924522409647,0.320125762024346,0.459483751644906,0,0.231768651889711,0.192909220463705,0,0.588795680537589,0,0.532427418478012,0.238436189947321,0.145346416632329,0.470546902076653,0.423073039458382,0.365855945745545,0.263069711437843,0.407412341537585,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.309873682371932,0,0.249810577937946,0.467863216890817,0,0.382576664137687,0.441182838239031,0|short_description=p2@Resp18}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19711 | |||
|HGNC= | |||
|MCL_coexpression_id=556 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P47939 | |||
|association_with_transcript=-26bp_to_ENSMUST00000039534_5end | |||
|cluster_id=chr1:75275016..75275030,- | |||
|description=CAGE_peak_2_at_Resp18_5end | |||
|id=chr1:75275016..75275030,- | |||
|ontology_enrichment_celltype=CL:0000117!1.51e-11!23;CL:0000337!1.51e-11!23;CL:0000540!2.15e-08!33;CL:0000047!2.15e-08!33;CL:0000031!2.15e-08!33;CL:0000404!2.15e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.57e-21,23;CL:0000337,9.57e-21,23;CL:0000540,3.08e-13,33;CL:0000047,3.08e-13,33;CL:0000031,3.08e-13,33;CL:0000404,3.08e-13,33;CL:0000393,1.34e-10,39;CL:0000211,1.34e-10,39;CL:0002319,2.94e-09,43;CL:0000221,5.82e-09,44;CL:0000133,5.82e-09,44;CL:0002614,3.43e-08,3;CL:0002610,8.67e-08,3;CL:0002612,7.77e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.32e-31!71;UBERON:0003075!2.32e-31!71;UBERON:0007284!2.32e-31!71;UBERON:0001049!1.41e-25!52;UBERON:0005068!1.41e-25!52;UBERON:0006241!1.41e-25!52;UBERON:0007135!1.41e-25!52;UBERON:0001017!6.07e-25!73;UBERON:0005743!6.07e-25!73;UBERON:0000073!1.65e-24!75;UBERON:0001016!1.65e-24!75;UBERON:0004121!2.39e-24!102;UBERON:0000924!2.39e-24!102;UBERON:0006601!2.39e-24!102;UBERON:0000955!8.01e-24!50;UBERON:0006238!8.01e-24!50;UBERON:0002616!4.84e-23!49;UBERON:0000033!1.52e-21!63;UBERON:0003080!4.49e-19!40;UBERON:0003056!1.61e-18!49;UBERON:0002780!3.62e-18!39;UBERON:0001890!3.62e-18!39;UBERON:0006240!3.62e-18!39;UBERON:0002020!1.03e-15!34;UBERON:0007811!3.45e-12!86;UBERON:0002791!1.10e-11!29;UBERON:0003528!1.10e-11!29;UBERON:0001893!1.10e-11!29;UBERON:0000153!9.21e-10!94;UBERON:0002021!7.23e-09!10;UBERON:0000411!7.23e-09!10;UBERON:0001950!7.23e-09!10;UBERON:0001894!8.36e-08!10;UBERON:0006222!8.36e-08!10;UBERON:0002420!8.98e-08!8;UBERON:0007245!8.98e-08!8;UBERON:0010009!8.98e-08!8;UBERON:0010011!8.98e-08!8;UBERON:0000454!8.98e-08!8;UBERON:0002298!3.71e-07!6;UBERON:0003076!4.74e-07!12;UBERON:0003057!4.74e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.35e-44,54;UBERON:0001049,1.70e-40,52;UBERON:0005068,1.70e-40,52;UBERON:0006241,1.70e-40,52;UBERON:0007135,1.70e-40,52;UBERON:0001017,2.78e-39,73;UBERON:0001016,5.26e-38,75;UBERON:0002346,2.13e-31,64;UBERON:0003075,2.13e-31,64;UBERON:0007284,2.13e-31,64;UBERON:0000955,2.85e-31,47;UBERON:0006238,2.85e-31,47;UBERON:0002616,9.62e-30,46;UBERON:0003080,1.37e-29,40;UBERON:0004121,3.50e-28,95;UBERON:0000924,3.50e-28,95;UBERON:0006601,3.50e-28,95;UBERON:0002780,9.53e-28,39;UBERON:0001890,9.53e-28,39;UBERON:0006240,9.53e-28,39;UBERON:0002020,1.63e-27,34;UBERON:0010371,1.54e-26,73;UBERON:0010314,1.07e-23,92;UBERON:0003056,5.91e-23,49;UBERON:0003528,5.08e-19,29;UBERON:0002791,5.08e-19,29;UBERON:0001893,5.08e-19,29;UBERON:0002021,8.19e-15,10;UBERON:0000411,8.19e-15,10;UBERON:0001950,8.19e-15,10;UBERON:0000025,4.17e-14,114;UBERON:0002240,5.27e-13,6;UBERON:0005174,5.27e-13,6;UBERON:0001137,5.27e-13,6;UBERON:0004111,1.17e-12,122;UBERON:0002420,2.57e-12,8;UBERON:0007245,2.57e-12,8;UBERON:0010009,2.57e-12,8;UBERON:0010011,2.57e-12,8;UBERON:0000454,2.57e-12,8;UBERON:0001948,4.29e-11,5;UBERON:0002315,4.29e-11,5;UBERON:0003076,8.79e-11,12;UBERON:0003057,8.79e-11,12;UBERON:0002950,3.01e-10,4;UBERON:0001891,3.01e-10,4;UBERON:0009616,3.01e-10,4;UBERON:0010286,3.01e-10,4;UBERON:0002619,5.75e-10,17;UBERON:0001894,1.47e-09,10;UBERON:0006222,1.47e-09,10;UBERON:0000956,1.51e-09,21;UBERON:0001869,1.51e-09,21;UBERON:0000203,1.51e-09,21;UBERON:0011216,2.73e-09,194;UBERON:0002038,3.43e-08,3;UBERON:0009663,3.43e-08,3;UBERON:0009661,3.43e-08,3;UBERON:0000125,3.43e-08,3;UBERON:0002308,3.43e-08,3;UBERON:0004684,8.67e-08,3;UBERON:0002275,8.67e-08,3;UBERON:0002257,7.77e-07,3 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,2.64495489636016,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0,12.5686433137674,8.1721360152097,0.244981598429908,0,0,7.70811166995721,7.53355294702608,9.5236050618871,1.18697658957174,2.28719109006024,1.04182674111352,13.6799669510677,23.0732670112989,12.2238598221448,3.83017161115768,5.12538050876771,2.05039390407831,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,1.38788261412909,1.52232739156071,0.461230994512117,1.20578112442098,0.587943535678524,0.753999547978053,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0.510914110417183,0,0,0,7.78911324905078,2.28750301409313,0.879580464790051,7.30062144807561,4.34716277461562,8.10373373782284,6.32740925964255,0,0,0,0.420883711772948,0,0.229902104433473,0.180062129805349,0.150704817835715,0.204109497453984,0,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,0.102904612379284,0,0,0.213288250535234,0.464473343720877,0,0,0,0,0.474529061544512,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.22477654945064,6.79827782234778,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0,0,0,0,0,0,1.92792789853084,0,0,0,0,0,0.242780636154981,0.302323556964751,0.565815239267694,0,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,0,0,13.9580238359053,0.18006109403131,0.258717367565509,0.428674070063185,1.59606210278046,1.78368817602071,2.79733335023606,1.8267896946876,0,0,0,0,0,0,0,0,0,6.30446026835733,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0.269728692769641,0.165306911450672,0.523511883968059,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,1.6942555278512,0.920650473014354,1.14579102687879,1.03111909406213,2.05524755931193,4.5323633843382,4.05013500139084,3.15224842256954,4.98456649882625,5.1776031175182,0,0,0.341467211508268,0,0,0,0.222246727801615,0,0,0,0,0.377252682772152,0.280924522409647,0.320125762024346,0.459483751644906,0,0.231768651889711,0.192909220463705,0,0.588795680537589,0,0.532427418478012,0.238436189947321,0.145346416632329,0.470546902076653,0.423073039458382,0.365855945745545,0.263069711437843,0.407412341537585,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.309873682371932,0,0.249810577937946,0.467863216890817,0,0.382576664137687,0.441182838239031,0 | |||
|short_description=p2@Resp18 | |||
}} |
Revision as of 00:52, 6 August 2015
Short description: | p2@Resp18 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Resp18_5end |
Coexpression cluster: | MCL_coexpression_mm9:556 |
Association with transcript: | -26bp_to_ENSMUST00000039534_5end |
EntrezGene: | 19711 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.57e-21 | 23 |
neuroblast (sensu Vertebrata) | 9.57e-21 | 23 |
neuron | 3.08e-13 | 33 |
neuronal stem cell | 3.08e-13 | 33 |
neuroblast | 3.08e-13 | 33 |
electrically signaling cell | 3.08e-13 | 33 |
electrically responsive cell | 1.34e-10 | 39 |
electrically active cell | 1.34e-10 | 39 |
neural cell | 2.94e-09 | 43 |
ectodermal cell | 5.82e-09 | 44 |
neurectodermal cell | 5.82e-09 | 44 |
neuron of the substantia nigra | 3.43e-08 | 3 |
raphe nuclei neuron | 8.67e-08 | 3 |
neuron of the ventral spinal cord | 7.77e-07 | 3 |