FFCP PHASE1:Mm9::chr5:115939465..115939467,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=432 | |MCL_coexpression_id=432 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000102044_5end | |association_with_transcript=0bp_to_ENSMUST00000102044_5end | ||
|cluster_id=chr5:115939465..115939467,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000102044_5end | |description=CAGE_peak_1_at_ENSMUST00000102044_5end | ||
|id=chr5:115939465..115939467,+ | |id=chr5:115939465..115939467,+ | ||
|ontology_enrichment_celltype=CL:0000144!9.68e-45!121;CL:0000012!9.68e-45!121;CL:0002371!3.07e-44!118;CL:0000548!2.10e-43!115;CL:0000004!2.10e-43!115;CL:0000255!2.10e-43!115;CL:0000034!2.07e-35!97;CL:0000723!4.51e-34!91;CL:0000048!4.51e-34!91;CL:0002321!6.45e-27!70;CL:0000220!6.45e-27!70;CL:0000055!1.01e-20!50;CL:0002319!1.14e-19!43;CL:0000221!1.30e-19!44;CL:0000133!1.30e-19!44;CL:0000063!2.51e-18!66;CL:0000219!6.74e-17!54;CL:0000393!8.58e-17!39;CL:0000211!8.58e-17!39;CL:0000540!3.12e-16!33;CL:0000047!3.12e-16!33;CL:0000031!3.12e-16!33;CL:0000404!3.12e-16!33;CL:0002320!3.41e-14!46;CL:0000134!3.41e-14!46;CL:0000117!5.83e-12!23;CL:0000337!5.83e-12!23;CL:0000988!4.26e-09!32;CL:0002032!4.26e-09!32;CL:0000037!4.26e-09!32;CL:0000566!4.26e-09!32;CL:0000837!4.26e-09!32;CL:0002031!4.39e-09!25;CL:0000049!2.73e-07!19;CL:0000763!4.34e-07!16;CL:0000839!6.79e-07!13;CL:0000066!8.68e-07!25 | |ontology_enrichment_celltype=CL:0000144!9.68e-45!121;CL:0000012!9.68e-45!121;CL:0002371!3.07e-44!118;CL:0000548!2.10e-43!115;CL:0000004!2.10e-43!115;CL:0000255!2.10e-43!115;CL:0000034!2.07e-35!97;CL:0000723!4.51e-34!91;CL:0000048!4.51e-34!91;CL:0002321!6.45e-27!70;CL:0000220!6.45e-27!70;CL:0000055!1.01e-20!50;CL:0002319!1.14e-19!43;CL:0000221!1.30e-19!44;CL:0000133!1.30e-19!44;CL:0000063!2.51e-18!66;CL:0000219!6.74e-17!54;CL:0000393!8.58e-17!39;CL:0000211!8.58e-17!39;CL:0000540!3.12e-16!33;CL:0000047!3.12e-16!33;CL:0000031!3.12e-16!33;CL:0000404!3.12e-16!33;CL:0002320!3.41e-14!46;CL:0000134!3.41e-14!46;CL:0000117!5.83e-12!23;CL:0000337!5.83e-12!23;CL:0000988!4.26e-09!32;CL:0002032!4.26e-09!32;CL:0000037!4.26e-09!32;CL:0000566!4.26e-09!32;CL:0000837!4.26e-09!32;CL:0002031!4.39e-09!25;CL:0000049!2.73e-07!19;CL:0000763!4.34e-07!16;CL:0000839!6.79e-07!13;CL:0000066!8.68e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000034,1.96e-36,97;CL:0000723,4.79e-35,91;CL:0000048,4.79e-35,91;CL:0002321,7.33e-28,70;CL:0002319,2.42e-20,43;CL:0000221,2.77e-20,44;CL:0000133,2.77e-20,44;CL:0000393,2.33e-17,39;CL:0000211,2.33e-17,39;CL:0000219,2.89e-17,54;CL:0000540,8.90e-17,33;CL:0000047,8.90e-17,33;CL:0000031,8.90e-17,33;CL:0000404,8.90e-17,33;CL:0002320,1.82e-14,46;CL:0000134,1.82e-14,46;CL:0000117,2.40e-12,23;CL:0000337,2.40e-12,23;CL:0002031,2.31e-09,25;CL:0000988,3.37e-09,32;CL:0002032,3.37e-09,32;CL:0000037,3.37e-09,32;CL:0000837,3.37e-09,32;CL:0000049,1.67e-07,19;CL:0000763,2.70e-07,16;CL:0000839,4.29e-07,13;CL:0000066,5.54e-07,25;CL:0000223,9.27e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.82e-17!73;UBERON:0005743!4.82e-17!73;UBERON:0000073!7.13e-17!75;UBERON:0001016!7.13e-17!75;UBERON:0002384!3.41e-14!46;UBERON:0002020!3.52e-12!34;UBERON:0002791!2.59e-10!29;UBERON:0003528!2.59e-10!29;UBERON:0001893!2.59e-10!29;UBERON:0000956!1.83e-08!21;UBERON:0001869!1.83e-08!21;UBERON:0000203!1.83e-08!21;UBERON:0001049!2.62e-08!52;UBERON:0005068!2.62e-08!52;UBERON:0006241!2.62e-08!52;UBERON:0007135!2.62e-08!52;UBERON:0002616!3.41e-08!49;UBERON:0000955!3.91e-08!50;UBERON:0006238!3.91e-08!50;UBERON:0002780!1.64e-07!39;UBERON:0001890!1.64e-07!39;UBERON:0006240!1.64e-07!39;UBERON:0002619!1.67e-07!17;UBERON:0003080!2.14e-07!40;UBERON:0004121!2.44e-07!102;UBERON:0000924!2.44e-07!102;UBERON:0006601!2.44e-07!102;UBERON:0002371!6.14e-07!16;UBERON:0002021!8.41e-07!10;UBERON:0000411!8.41e-07!10;UBERON:0001950!8.41e-07!10 | |ontology_enrichment_uberon=UBERON:0001017!4.82e-17!73;UBERON:0005743!4.82e-17!73;UBERON:0000073!7.13e-17!75;UBERON:0001016!7.13e-17!75;UBERON:0002384!3.41e-14!46;UBERON:0002020!3.52e-12!34;UBERON:0002791!2.59e-10!29;UBERON:0003528!2.59e-10!29;UBERON:0001893!2.59e-10!29;UBERON:0000956!1.83e-08!21;UBERON:0001869!1.83e-08!21;UBERON:0000203!1.83e-08!21;UBERON:0001049!2.62e-08!52;UBERON:0005068!2.62e-08!52;UBERON:0006241!2.62e-08!52;UBERON:0007135!2.62e-08!52;UBERON:0002616!3.41e-08!49;UBERON:0000955!3.91e-08!50;UBERON:0006238!3.91e-08!50;UBERON:0002780!1.64e-07!39;UBERON:0001890!1.64e-07!39;UBERON:0006240!1.64e-07!39;UBERON:0002619!1.67e-07!17;UBERON:0003080!2.14e-07!40;UBERON:0004121!2.44e-07!102;UBERON:0000924!2.44e-07!102;UBERON:0006601!2.44e-07!102;UBERON:0002371!6.14e-07!16;UBERON:0002021!8.41e-07!10;UBERON:0000411!8.41e-07!10;UBERON:0001950!8.41e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.32e-17,73;UBERON:0001016,3.45e-17,75;UBERON:0002384,1.82e-14,46;UBERON:0002020,1.73e-12,34;UBERON:0003528,1.48e-10,29;UBERON:0002791,1.48e-10,29;UBERON:0001893,1.48e-10,29;UBERON:0000073,5.51e-10,54;UBERON:0004121,3.15e-09,95;UBERON:0000924,3.15e-09,95;UBERON:0006601,3.15e-09,95;UBERON:0000956,1.11e-08,21;UBERON:0001869,1.11e-08,21;UBERON:0000203,1.11e-08,21;UBERON:0001049,2.31e-08,52;UBERON:0005068,2.31e-08,52;UBERON:0006241,2.31e-08,52;UBERON:0007135,2.31e-08,52;UBERON:0002619,1.10e-07,17;UBERON:0002780,1.42e-07,39;UBERON:0001890,1.42e-07,39;UBERON:0006240,1.42e-07,39;UBERON:0003080,1.86e-07,40;UBERON:0002371,3.86e-07,16;UBERON:0002021,5.36e-07,10;UBERON:0000411,5.36e-07,10;UBERON:0001950,5.36e-07,10;UBERON:0002616,5.41e-07,46;UBERON:0000955,6.06e-07,47;UBERON:0006238,6.06e-07,47;UBERON:0002346,9.81e-07,64;UBERON:0003075,9.81e-07,64;UBERON:0007284,9.81e-07,64 | |||
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|phase1_expression=2.88267924788629,17.0997949743287,63.2448942751455,23.2897442706259,129.231098326158,8.2260843236826,29.9024179962273,102.523918812612,80.1087829042984,97.8389720025933,58.5565451331227,23.7721033806103,115.218091243701,66.876607850533,646.232937922386,33.4084191193213,326.695397085844,79.9696589183133,103.247168505121,434.575003441183,0.255129870453209,15.2908064849363,35.2619715337563,5.75972722056264,18.8115610475079,24.1177424928308,7.32295393470427,5.60225204983311,28.5035129184561,9.8291750606373,14.8559442139054,3681.90784471894,534.491300410991,17306.1995668859,26.8632006368685,29.2572975830947,38.9963470461125,15.0671387065287,42.973443948809,10.9939986234498,45.8820560664191,48.4962294320496,16.9928623560904,1.38486499773135,2.43304634926835,1.46837401729345,1078.91766385595,376.311419912651,299.432267067085,562.096838223753,366.344465393574,2167.78867062377,4.86569557567435,43.5217285206807,56.463758255934,435.282965772822,664.471047217977,841.061182504508,467.75565750739,1417.69582444905,4112.9319773516,347.31564537086,3094.74589046677,349.611040163823,3529.26404800153,1501.95496299606,551.264203353865,262.421102534622,122.664811360929,638.578088308897,395.831577263301,494.461854002984,272.772648075243,527.200399821162,378.110383166942,6666.17464049587,5525.61490854933,481.253577243072,357.135189820766,824.289298313712,413.981587300904,326.091769968532,779.199750212854,361.85635825037,882.715477406632,337.055101781876,178.676459402874,301.780702791162,2.65041676666144,1.51143120213571,56.5235752968272,144.551211332873,383.503832211171,830.603211930601,740.745115890343,733.868041065436,1.12355536105401,1.02258193546835,56.1137769942197,32.153901280441,3.94361575374705,80.8456807710202,76.4415719119937,184.877342819866,78.8027389280819,85.1289147996331,162.273346849745,0.45673551887624,0,1.48442139064825,0.867426633830679,0.913396434936424,0.922461989024234,2.71300752994721,0.352766121407114,0.502666365318702,0.988779870937496,0.86759614151947,3.5384422077995,0.647067399789637,0.883366073841574,1.93950101254089,14.9113408974498,2.34224637609238,0.41889341362691,2.55457055208591,14.97689056324,16.7972764678154,11.5633906636489,1.64769703345305,2.74500361691176,0.628271760564322,1.91206752211504,0.511430914660661,0.41557608911912,1.1356888414743,0.407357455401265,0.124406970610093,2.77995034277042,0.841767423545896,0.910843100738926,53.3372882285657,0.360124259610698,2.26057226753573,0.544291993210623,0.512454881139399,1.40552586839593,0.258703370739016,0.862271971731369,0.756424320671277,1.40760899331159,2.19195732427575,0.834141747676794,1.39300866608867,1.02891068203972,1.19420560091096,12.6398373716382,10.0365683774739,45.4661599032948,0.828503090142008,1.40715635988658,1.2604344302271,0.946978942340841,1.37734962223183,1.23413690309903,0.232533944750408,1.07309360559848,1.05088808130453,0.658239399653922,0.32833492815819,0.486412857275134,0.730999937126662,0.658650345873152,0.671032093801859,1.26173969138476,0.617427674275707,3.63460661282178,0.528901133327089,0.853153002140936,1.62565670302307,0.515469845288373,0.605050573870028,0.667134131534611,2.09248188723815,4.74529061544512,1.31759163779209,0.251335208800269,0.198956472041151,0.19496408711912,12.5834717211591,1.51296634912286,1.1948476395262,1.51734320762465,0.685491075658373,1.1270773567308,1.22190796707189,0.775809948670503,0.49095073923223,0.126473074248515,0.147610147979602,0.156998727841375,0.370191491765402,1.77871576252289,0,0.786235980452812,0.449724224769707,1.21716072833102,2.65294875727659,11.7127891819453,0.863088412352432,0.486405680325106,1.37280706594041,0,0.372140947668503,1.24815069245824,1.01031551178845,0,0.482443521363367,0.923765950833023,27.4762547067203,0.977789858652155,1.18821560042632,1.40814148973101,0.837531287209079,1.42826184531608,0.975668239288994,0,0.221464689648775,0.956728611944923,1.63863314715738,0.690739927463582,1.15719246865209,1533.5473576624,362.241185423261,0.983528546038072,0.827810238914197,1.28440471990234,0.820481806145422,0.655739781506702,0.504941854408746,402.272979755727,346.709604935415,847.906493476297,564.205331965975,633.639429090329,658.719087145613,523.420237265638,319.143396839153,685.429006959272,1.92792789853084,2.41298144854057,1.24645922567079,1.14020871547503,1.48473110675282,0,2.91336763385978,1.209294227859,0.188605079755898,1.47650946440386,0.922305443831782,0.258428293168221,1.09060118843252,1.78248689192361,0.316036757935816,1.05418608574999,0,1.70219802876894,3.24109969256358,0.905510786479282,1.50035924522115,1.06404140185364,4.28085162244969,1.15184314421485,6.39376393140658,1.17335854031855,1.90648863777438,0.661585194164886,0.16488625294148,0.161464426695906,0.301564624640779,0.119372344003136,0.328281799490123,0.874442509889552,1.11255181206306,0.854354403989263,1.23832120777933,0,0.753473828018764,0.683471138605126,0.228778173206523,11.3885548095883,5.45810664062266,4.83699908315483,1.90934123603023,1.42351197111511,0.609958401380546,1.404069430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| ||
|short_description=p1@ENSMUST00000102044 | |short_description=p1@ENSMUST00000102044 | ||
}} | }} |
Latest revision as of 03:03, 6 August 2015
Short description: | p1@ENSMUST00000102044 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000102044_5end |
Coexpression cluster: | MCL_coexpression_mm9:432 |
Association with transcript: | 0bp_to_ENSMUST00000102044_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 1.96e-36 | 97 |
somatic stem cell | 4.79e-35 | 91 |
multi fate stem cell | 4.79e-35 | 91 |
embryonic cell | 7.33e-28 | 70 |
neural cell | 2.42e-20 | 43 |
ectodermal cell | 2.77e-20 | 44 |
neurectodermal cell | 2.77e-20 | 44 |
electrically responsive cell | 2.33e-17 | 39 |
electrically active cell | 2.33e-17 | 39 |
motile cell | 2.89e-17 | 54 |
neuron | 8.90e-17 | 33 |
neuronal stem cell | 8.90e-17 | 33 |
neuroblast | 8.90e-17 | 33 |
electrically signaling cell | 8.90e-17 | 33 |
connective tissue cell | 1.82e-14 | 46 |
mesenchymal cell | 1.82e-14 | 46 |
CNS neuron (sensu Vertebrata) | 2.40e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.40e-12 | 23 |
hematopoietic lineage restricted progenitor cell | 2.31e-09 | 25 |
hematopoietic cell | 3.37e-09 | 32 |
hematopoietic oligopotent progenitor cell | 3.37e-09 | 32 |
hematopoietic stem cell | 3.37e-09 | 32 |
hematopoietic multipotent progenitor cell | 3.37e-09 | 32 |
common myeloid progenitor | 1.67e-07 | 19 |
myeloid cell | 2.70e-07 | 16 |
myeloid lineage restricted progenitor cell | 4.29e-07 | 13 |
epithelial cell | 5.54e-07 | 25 |
endodermal cell | 9.27e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.32e-17 | 73 |
nervous system | 3.45e-17 | 75 |
connective tissue | 1.82e-14 | 46 |
gray matter | 1.73e-12 | 34 |
brain grey matter | 1.48e-10 | 29 |
regional part of telencephalon | 1.48e-10 | 29 |
telencephalon | 1.48e-10 | 29 |
regional part of nervous system | 5.51e-10 | 54 |
ectoderm-derived structure | 3.15e-09 | 95 |
ectoderm | 3.15e-09 | 95 |
presumptive ectoderm | 3.15e-09 | 95 |
cerebral cortex | 1.11e-08 | 21 |
cerebral hemisphere | 1.11e-08 | 21 |
pallium | 1.11e-08 | 21 |
neural tube | 2.31e-08 | 52 |
neural rod | 2.31e-08 | 52 |
future spinal cord | 2.31e-08 | 52 |
neural keel | 2.31e-08 | 52 |
regional part of cerebral cortex | 1.10e-07 | 17 |
regional part of forebrain | 1.42e-07 | 39 |
forebrain | 1.42e-07 | 39 |
future forebrain | 1.42e-07 | 39 |
anterior neural tube | 1.86e-07 | 40 |
bone marrow | 3.86e-07 | 16 |
occipital lobe | 5.36e-07 | 10 |
visual cortex | 5.36e-07 | 10 |
neocortex | 5.36e-07 | 10 |
regional part of brain | 5.41e-07 | 46 |
brain | 6.06e-07 | 47 |
future brain | 6.06e-07 | 47 |
neurectoderm | 9.81e-07 | 64 |
neural plate | 9.81e-07 | 64 |
presumptive neural plate | 9.81e-07 | 64 |