FFCP PHASE1:Mm9::chr13:55584144..55584165,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:55584144..55584165,- | |||
|description=CAGE_peak_at_chr13:55584144..55584165,- | |description=CAGE_peak_at_chr13:55584144..55584165,- | ||
|id=chr13:55584144..55584165,- | |id=chr13:55584144..55584165,- | ||
|ontology_enrichment_celltype=CL:0002319!9.29e-23!43;CL:0000221!3.13e-22!44;CL:0000133!3.13e-22!44;CL:0000055!9.44e-22!50;CL:0000540!3.58e-18!33;CL:0000047!3.58e-18!33;CL:0000031!3.58e-18!33;CL:0000404!3.58e-18!33;CL:0000393!4.54e-18!39;CL:0000211!4.54e-18!39;CL:0000117!8.46e-16!23;CL:0000337!8.46e-16!23;CL:0002321!1.72e-12!70;CL:0000220!1.72e-12!70 | |ontology_enrichment_celltype=CL:0002319!9.29e-23!43;CL:0000221!3.13e-22!44;CL:0000133!3.13e-22!44;CL:0000055!9.44e-22!50;CL:0000540!3.58e-18!33;CL:0000047!3.58e-18!33;CL:0000031!3.58e-18!33;CL:0000404!3.58e-18!33;CL:0000393!4.54e-18!39;CL:0000211!4.54e-18!39;CL:0000117!8.46e-16!23;CL:0000337!8.46e-16!23;CL:0002321!1.72e-12!70;CL:0000220!1.72e-12!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.07e-36,43;CL:0000221,1.20e-35,44;CL:0000133,1.20e-35,44;CL:0000117,8.25e-34,23;CL:0000337,8.25e-34,23;CL:0000540,3.75e-28,33;CL:0000047,3.75e-28,33;CL:0000031,3.75e-28,33;CL:0000404,3.75e-28,33;CL:0000393,1.42e-26,39;CL:0000211,1.42e-26,39;CL:0002321,9.46e-25,70;CL:0002609,1.21e-11,6;CL:0002453,1.46e-11,8;CL:0000723,1.44e-09,91;CL:0000048,1.44e-09,91;CL:0000128,4.79e-09,6;CL:0000126,4.79e-09,6;CL:0000127,4.79e-09,6;CL:0000333,5.98e-09,10;CL:0000095,5.98e-09,10;CL:0000243,5.98e-09,10;CL:0000123,5.98e-09,10;CL:0000125,5.98e-09,10;CL:0000030,5.98e-09,10;CL:0000339,5.98e-09,10;CL:0000034,1.69e-08,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.11e-29!75;UBERON:0001016!3.11e-29!75;UBERON:0001017!3.89e-29!73;UBERON:0005743!3.89e-29!73;UBERON:0004121!5.98e-22!102;UBERON:0000924!5.98e-22!102;UBERON:0006601!5.98e-22!102;UBERON:0002020!6.35e-21!34;UBERON:0001049!4.29e-19!52;UBERON:0005068!4.29e-19!52;UBERON:0006241!4.29e-19!52;UBERON:0007135!4.29e-19!52;UBERON:0002346!9.91e-19!71;UBERON:0003075!9.91e-19!71;UBERON:0007284!9.91e-19!71;UBERON:0002616!2.19e-18!49;UBERON:0000955!2.36e-18!50;UBERON:0006238!2.36e-18!50;UBERON:0002791!1.86e-17!29;UBERON:0003528!1.86e-17!29;UBERON:0001893!1.86e-17!29;UBERON:0000033!2.15e-16!63;UBERON:0003080!2.36e-16!40;UBERON:0002780!2.80e-16!39;UBERON:0001890!2.80e-16!39;UBERON:0006240!2.80e-16!39;UBERON:0003056!3.15e-16!49;UBERON:0000956!1.15e-13!21;UBERON:0001869!1.15e-13!21;UBERON:0000203!1.15e-13!21;UBERON:0002619!3.38e-11!17;UBERON:0000153!6.03e-09!94;UBERON:0007811!8.13e-08!86;UBERON:0002021!2.11e-07!10;UBERON:0000411!2.11e-07!10;UBERON:0001950!2.11e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.87e-40,73;UBERON:0002020,5.70e-40,34;UBERON:0001016,4.61e-39,75;UBERON:0000073,2.96e-33,54;UBERON:0003528,7.36e-32,29;UBERON:0002791,7.36e-32,29;UBERON:0001893,7.36e-32,29;UBERON:0001049,1.27e-28,52;UBERON:0005068,1.27e-28,52;UBERON:0006241,1.27e-28,52;UBERON:0007135,1.27e-28,52;UBERON:0004121,2.27e-28,95;UBERON:0000924,2.27e-28,95;UBERON:0006601,2.27e-28,95;UBERON:0000956,5.71e-26,21;UBERON:0001869,5.71e-26,21;UBERON:0000203,5.71e-26,21;UBERON:0002780,1.40e-23,39;UBERON:0001890,1.40e-23,39;UBERON:0006240,1.40e-23,39;UBERON:0002346,3.48e-23,64;UBERON:0003075,3.48e-23,64;UBERON:0007284,3.48e-23,64;UBERON:0003080,8.37e-23,40;UBERON:0002616,1.92e-22,46;UBERON:0002619,2.92e-22,17;UBERON:0000955,8.52e-22,47;UBERON:0006238,8.52e-22,47;UBERON:0010371,3.65e-19,73;UBERON:0003056,2.95e-17,49;UBERON:0002021,1.34e-15,10;UBERON:0000411,1.34e-15,10;UBERON:0001950,1.34e-15,10;UBERON:0010314,2.37e-15,92;UBERON:0000025,1.10e-09,114;UBERON:0011216,2.55e-09,194;UBERON:0001948,3.54e-09,5;UBERON:0002315,3.54e-09,5;UBERON:0004111,1.81e-08,122;UBERON:0001954,3.35e-08,7;UBERON:0003022,3.35e-08,7;UBERON:0002421,3.35e-08,7;UBERON:0000349,3.35e-08,7;UBERON:0002600,3.35e-08,7;UBERON:0002240,1.51e-07,6;UBERON:0005174,1.51e-07,6;UBERON:0001137,1.51e-07,6;UBERON:0002420,3.69e-07,8;UBERON:0007245,3.69e-07,8;UBERON:0010009,3.69e-07,8;UBERON:0010011,3.69e-07,8;UBERON:0000454,3.69e-07,8 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.917733760808408,1.56478268869608,4.79655344036982,1.09843091367236,2.13872888981712,2.09979632438044,2.87505128729943,0,0,0,1.28629718017973,2.0057340795713,0.515672092277442,4.45096213891115,6.87688273053643,5.07065122804943,2.03306719241479,0.889294796111139,0.449949858640699,0.988866362566974,0,1.79760066311043,3.07374644257244,6.11768712620018,19.9808788730902,6.94072372459561,2.28520787523043,4.19650227808066,3.06226998037385,9.77623804386011,8.27296907949019,3.30347642998166,2.042997409363,1.99688493233117,3.95658863190582,10.8870295886867,5.73004707612436,1.95428099300967,0.56276261003168,1.37518422999129,4.71405736757868,4.8406371471695,4.47358669980721,0.37863096666592,0.377857800533928,0.289864488701678,0,0,0,0,0,0,0.511290967734173,0.519572009205738,0,0.14084341977668,2.56652954828636,0,0,0.432982082022428,0.506719730950197,1.51657333504435,0,0,0,0.693941307064543,0.304465478312141,0.230615497256059,0.60289056221049,0,0,0.247194967734374,0,0,0.485300549842228,0.220841518460394,0.484875253135222,0,0.292780797011547,0,0,0,0,0.127070227073065,0.449371918214468,0.457500602818626,2.1361239859187,0.695297280769106,1.02286182932132,0.62336413367868,0.811206315338788,0.407357455401265,0,0,0,0.520481771850815,0.689706313300419,0.720248519221397,0.150704817835715,0.204109497453984,0.768682321709099,0.655912071918102,0.258703370739016,1.29340795759705,0.567318240503458,1.05570674498369,1.09597866213787,0.278047249225598,0.696504333044333,0.205782136407943,0.995171334092466,0,0,0,0,0.234526059981096,0.180062061461015,0,0.393528463494808,0.308534225774757,0.232533944750408,0.536546802799238,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0,0.268412837520744,0.841159794256509,1.64647379806855,0,0,0.639864751605702,0.696710015581316,0.38660238396628,0,0,0.380451252225118,0,0.164698954724011,0,0,0.19496408711912,0,0,0.199141273254367,0.569003702859245,0.456994050438915,0,0.203651327845314,0,0.140271639780637,0.189709611372772,0.147610147979602,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0.37898282354097,0.814824882210129,0.339490171550376,0.469380496577004,0,0.238043640886014,0.390267295715598,0,0.44292937929755,0.318909537314974,0,0.345369963731791,0,0,0,0,0,0.481651769963376,0.35163505977661,0,0,0.631016438832513,3.12350995437311,0.646270193198397,0.955875191810208,0.445597348164788,0.566153061577665,1.61924280669958,0.876767573733936,1.97643888973262,0.321321316421807,0,0.178065603667255,0,0,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0,0.540183282093931,0.776152102696527,0.214337035031592,0.354680467284547,1.07021290561242,0,0.304464949114599,0.23467170806371,0,0,0,0,0.120625849856312,0.119372344003136,0,0,0,0,0.412773735926445,0,0,0,0,0.169978429993855,0,0,0,0.632671987162271,0,0.432021363287205,0.209088296014469,0,0.269728692769641,0.165306911450672,0.26175594198403,0,0,0,0.747582730219894,0,0.583353565032143,0.129159823477731,0.506868376472335,0.352071715937262,0.2604087696879,0.209718688851422,0,0,0,0.608175645870493,0.308132871494482,0.129920822977795,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0.269141569828427,0.167884616364078,0.19318959403219,0.187682475451182,0.183151624267265,0.214368379079066,0,2.25900737046827,3.22227665555024,3.43737308063638,2.749650917499,4.11049511862385,6.7985450765073,4.05013500139084,2.70192721934532,1.35942722695261,4.14208249401456,0.518936737920883,0.399024873401031,0.341467211508268,0.243106717068294,0.628839487883947,0.183843508450014,0,1.03017528619447,0.320919209591815,0.758091635291392,0.50695859978048,0.565879024158229,0.280924522409647,0.576226371643824,0.229741875822453,0.476293691283074,0.579421629724277,0.77163688185482,0.412085900803307,0.883193520806384,0.342869252385415,0.354951612318675,0.238436189947321,0.290692833264657,0.188218760830661,0.592302255241736,0.73171189149109,0.526139422875686,0.679020569229309,0,0.237270036248348,0.985044823755635,0.818462086339379,0.154936841185966,0.578719832943424,1.74867404556562,0.233931608445408,0.214871054048298,0.57386499620653,0.220591419119515,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.917733760808408,1.56478268869608,4.79655344036982,1.09843091367236,2.13872888981712,2.09979632438044,2.87505128729943,0,0,0,1.28629718017973,2.0057340795713,0.515672092277442,4.45096213891115,6.87688273053643,5.07065122804943,2.03306719241479,0.889294796111139,0.449949858640699,0.988866362566974,0,1.79760066311043,3.07374644257244,6.11768712620018,19.9808788730902,6.94072372459561,2.28520787523043,4.19650227808066,3.06226998037385,9.77623804386011,8.27296907949019,3.30347642998166,2.042997409363,1.99688493233117,3.95658863190582,10.8870295886867,5.73004707612436,1.95428099300967,0.56276261003168,1.37518422999129,4.71405736757868,4.8406371471695,4.47358669980721,0.37863096666592,0.377857800533928,0.289864488701678,0,0,0,0,0,0,0.511290967734173,0.519572009205738,0,0.14084341977668,2.56652954828636,0,0,0.432982082022428,0.506719730950197,1.51657333504435,0,0,0,0.693941307064543,0.304465478312141,0.230615497256059,0.60289056221049,0,0,0.247194967734374,0,0,0.485300549842228,0.220841518460394,0.484875253135222,0,0.292780797011547,0,0,0,0,0.127070227073065,0.449371918214468,0.457500602818626,2.1361239859187,0.695297280769106,1.02286182932132,0.62336413367868,0.811206315338788,0.407357455401265,0,0,0,0.520481771850815,0.689706313300419,0.720248519221397,0.150704817835715,0.204109497453984,0.768682321709099,0.655912071918102,0.258703370739016,1.29340795759705,0.567318240503458,1.05570674498369,1.09597866213787,0.278047249225598,0.696504333044333,0.205782136407943,0.995171334092466,0,0,0,0,0.234526059981096,0.180062061461015,0,0.393528463494808,0.308534225774757,0.232533944750408,0.536546802799238,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0,0.268412837520744,0.841159794256509,1.64647379806855,0,0,0.639864751605702,0.696710015581316,0.38660238396628,0,0,0.380451252225118,0,0.164698954724011,0,0,0.19496408711912,0,0,0.199141273254367,0.569003702859245,0.456994050438915,0,0.203651327845314,0,0.140271639780637,0.189709611372772,0.147610147979602,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0.37898282354097,0.814824882210129,0.339490171550376,0.469380496577004,0,0.238043640886014,0.390267295715598,0,0.44292937929755,0.318909537314974,0,0.345369963731791,0,0,0,0,0,0.481651769963376,0.35163505977661,0,0,0.631016438832513,3.12350995437311,0.646270193198397,0.955875191810208,0.445597348164788,0.566153061577665,1.61924280669958,0.876767573733936,1.97643888973262,0.321321316421807,0,0.178065603667255,0,0,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0,0.540183282093931,0.776152102696527,0.214337035031592,0.354680467284547,1.07021290561242,0,0.304464949114599,0.23467170806371,0,0,0,0,0.120625849856312,0.119372344003136,0,0,0,0,0.412773735926445,0,0,0,0,0.169978429993855,0,0,0,0.632671987162271,0,0.432021363287205,0.209088296014469,0,0.269728692769641,0.165306911450672,0.26175594198403,0,0,0,0.747582730219894,0,0.583353565032143,0.129159823477731,0.506868376472335,0.352071715937262,0.2604087696879,0.209718688851422,0,0,0,0.608175645870493,0.308132871494482,0.129920822977795,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0.269141569828427,0.167884616364078,0.19318959403219,0.187682475451182,0.183151624267265,0.214368379079066,0,2.25900737046827,3.22227665555024,3.43737308063638,2.749650917499,4.11049511862385,6.7985450765073,4.05013500139084,2.70192721934532,1.35942722695261,4.14208249401456,0.518936737920883,0.399024873401031,0.341467211508268,0.243106717068294,0.628839487883947,0.183843508450014,0,1.03017528619447,0.320919209591815,0.758091635291392,0.50695859978048,0.565879024158229,0.280924522409647,0.576226371643824,0.229741875822453,0.476293691283074,0.579421629724277,0.77163688185482,0.412085900803307,0.883193520806384,0.342869252385415,0.354951612318675,0.238436189947321,0.290692833264657,0.188218760830661,0.592302255241736,0.73171189149109,0.526139422875686,0.679020569229309,0,0.237270036248348,0.985044823755635,0.818462086339379,0.154936841185966,0.578719832943424,1.74867404556562,0.233931608445408,0.214871054048298,0.57386499620653,0.220591419119515,0 | ||
|short_description=p@chr13:55584144..55584165,- | |short_description=p@chr13:55584144..55584165,- | ||
}} | }} |
Latest revision as of 04:01, 6 August 2015
Short description: | p@chr13:55584144..55584165, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:55584144..55584165, - |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.07e-36 | 43 |
ectodermal cell | 1.20e-35 | 44 |
neurectodermal cell | 1.20e-35 | 44 |
CNS neuron (sensu Vertebrata) | 8.25e-34 | 23 |
neuroblast (sensu Vertebrata) | 8.25e-34 | 23 |
neuron | 3.75e-28 | 33 |
neuronal stem cell | 3.75e-28 | 33 |
neuroblast | 3.75e-28 | 33 |
electrically signaling cell | 3.75e-28 | 33 |
electrically responsive cell | 1.42e-26 | 39 |
electrically active cell | 1.42e-26 | 39 |
embryonic cell | 9.46e-25 | 70 |
neuron of cerebral cortex | 1.21e-11 | 6 |
oligodendrocyte precursor cell | 1.46e-11 | 8 |
somatic stem cell | 1.44e-09 | 91 |
multi fate stem cell | 1.44e-09 | 91 |
oligodendrocyte | 4.79e-09 | 6 |
macroglial cell | 4.79e-09 | 6 |
astrocyte | 4.79e-09 | 6 |
migratory neural crest cell | 5.98e-09 | 10 |
neuron associated cell | 5.98e-09 | 10 |
glial cell (sensu Vertebrata) | 5.98e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 5.98e-09 | 10 |
glial cell | 5.98e-09 | 10 |
glioblast | 5.98e-09 | 10 |
glioblast (sensu Vertebrata) | 5.98e-09 | 10 |
stem cell | 1.69e-08 | 97 |