FFCP PHASE1:Mm9::chr18:86564202..86564255,+: Difference between revisions
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{{FFCP|EntrezGene=246317|HGNC=|MCL_coexpression_id=2|UniProt=Q8R4I7|association_with_transcript=-88bp_to_ENSMUST00000058829,NM_144946,uc008fuz.2_5end|description=CAGE_peak_1_at_Neto1_5end|id=chr18:86564202..86564255,+|ontology_enrichment_celltype=CL:0000540!1.73e-14!33;CL:0000047!1.73e-14!33;CL:0000031!1.73e-14!33;CL:0000404!1.73e-14!33;CL:0000117!5.37e-12!23;CL:0000337!5.37e-12!23;CL:0000393!7.11e-11!39;CL:0000211!7.11e-11!39;CL:0002319!5.67e-10!43;CL:0000221!2.31e-09!44;CL:0000133!2.31e-09!44;CL:0000055!3.01e-07!50|ontology_enrichment_celltype_v019_2=CL:0000540,2.33e-20,33;CL:0000047,2.33e-20,33;CL:0000031,2.33e-20,33;CL:0000404,2.33e-20,33;CL:0000117,2.29e-16,23;CL:0000337,2.29e-16,23;CL:0000393,1.82e-15,39;CL:0000211,1.82e-15,39;CL:0002319,7.46e-15,43;CL:0000221,2.96e-14,44;CL:0000133,2.96e-14,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.46e-26!73;UBERON:0005743!2.46e-26!73;UBERON:0000073!4.69e-25!75;UBERON:0001016!4.69e-25!75;UBERON:0002346!1.19e-20!71;UBERON:0003075!1.19e-20!71;UBERON:0007284!1.19e-20!71;UBERON:0001049!1.83e-20!52;UBERON:0005068!1.83e-20!52;UBERON:0006241!1.83e-20!52;UBERON:0007135!1.83e-20!52;UBERON:0000955!4.83e-19!50;UBERON:0006238!4.83e-19!50;UBERON:0004121!5.89e-19!102;UBERON:0000924!5.89e-19!102;UBERON:0006601!5.89e-19!102;UBERON:0002616!2.44e-18!49;UBERON:0002020!3.68e-18!34;UBERON:0003056!2.85e-17!49;UBERON:0003080!7.22e-17!40;UBERON:0000033!1.42e-16!63;UBERON:0002780!2.81e-16!39;UBERON:0001890!2.81e-16!39;UBERON:0006240!2.81e-16!39;UBERON:0002791!4.22e-15!29;UBERON:0003528!4.22e-15!29;UBERON:0001893!4.22e-15!29;UBERON:0000956!3.62e-11!21;UBERON:0001869!3.62e-11!21;UBERON:0000203!3.62e-11!21;UBERON:0002619!6.43e-09!17;UBERON:0002021!2.75e-08!10;UBERON:0000411!2.75e-08!10;UBERON:0001950!2.75e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.56e-35,73;UBERON:0001016,1.24e-33,75;UBERON:0000073,1.32e-27,54;UBERON:0001049,3.40e-26,52;UBERON:0005068,3.40e-26,52;UBERON:0006241,3.40e-26,52;UBERON:0007135,3.40e-26,52;UBERON:0002020,3.79e-26,34;UBERON:0002346,8.37e-26,64;UBERON:0003075,8.37e-26,64;UBERON:0007284,8.37e-26,64;UBERON:0004121,3.18e-25,95;UBERON:0000924,3.18e-25,95;UBERON:0006601,3.18e-25,95;UBERON:0000955,4.75e-22,47;UBERON:0006238,4.75e-22,47;UBERON:0003528,9.05e-22,29;UBERON:0002791,9.05e-22,29;UBERON:0001893,9.05e-22,29;UBERON:0003080,1.04e-21,40;UBERON:0002616,4.26e-21,46;UBERON:0002780,6.97e-21,39;UBERON:0001890,6.97e-21,39;UBERON:0006240,6.97e-21,39;UBERON:0010371,2.37e-20,73;UBERON:0003056,6.32e-19,49;UBERON:0000956,3.62e-16,21;UBERON:0001869,3.62e-16,21;UBERON:0000203,3.62e-16,21;UBERON:0002619,5.96e-13,17;UBERON:0010314,1.39e-12,92;UBERON:0002021,4.16e-11,10;UBERON:0000411,4.16e-11,10;UBERON:0001950,4.16e-11,10;UBERON:0002420,9.46e-07,8;UBERON:0007245,9.46e-07,8;UBERON:0010009,9.46e-07,8;UBERON:0010011,9.46e-07,8;UBERON:0000454,9.46e-07,8|phase1_expression=0,0,0,0,1.00179145989269,1.34303417529512,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08207792725135,0,0,0.47997726838022,0.22940928106717,0,0.430761996159075,0,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550640256485045,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0,1.82084814773638,2.64495489636016,1.90149421051854,0.338844532069132,0,0,0,0,2.09720077362883,1.15265491596466,4.45865332926454,5.13022565660425,5.46844899513593,6.56997264128748,10.1599528837742,12.3715707207104,8.53024692062304,5.51531271966013,2.20231761998777,7.78892762319645,8.75557239560588,2.63772575460388,2.74462930807229,3.64639359389732,1.95428099300967,3.93933827022176,13.7518422999129,11.490514833473,14.8066548031067,4.65998614563251,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.776813650941515,0.148442139064825,0,0.608930956624282,0.230615497256059,0.452167921657868,0.823120949949934,0,0,0.289198713839823,0,0.323533699894818,0,0.484875253135222,0,1.17112318804619,0.41889341362691,0.255457055208591,0,0,0,6.5907881338122,68.1675898199753,67.6020414367211,51.1043501365293,56.513116070003,13.2984348518118,40.0735919777361,2.24046600470696,0.248813941220186,0,0.631325567659422,1.04096354370163,0.459804208866946,0.540186389416048,1.05493372485001,1.08858398642125,0.640568601424249,0.281105173679186,1.81092359517311,0,0,0.175951124163949,1.09597866213787,0.556094498451196,0,0.823128545631774,0.59710280045548,0,0,0,0,0,0,0.23674473558521,0,0.462801338662135,0,0.268273401399619,0,0,0,0,0,0,0,79.9101804543684,22.1244916615462,0,0.264450566663544,0,0.232236671860439,0.77320476793256,0.80673409849337,0.444756087689741,0,0,0.164698954724011,0,0,0.19496408711912,0.898819408654221,0.648414149624083,0,0.379335801906163,0,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0.500535317148282,0.393117990226406,0.449724224769707,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.648540907100142,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0.37898282354097,1.30371981153621,0.339490171550376,0.469380496577004,0,0,0.585400943573396,0.157635144106191,0.664394068946325,1.2756381492599,0.491589944147214,0.172684981865896,0.144649058581512,0,0,0,0,6.90367536947505,4.92289083687253,0,0,3.47059041357882,3.51394869866975,7.75524231838076,3.82350076724083,1.55959071857676,3.11384183867716,4.04810701674894,2.04579100537918,1.97643888973262,45.9489482483184,0.567760340833074,0.35613120733451,1.30309567482861,0.164970122972535,1.32745138339963,0.485561272309963,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0,1.05418608574999,0,0.680879211507576,0.18006109403131,0.129358683782755,0.643011105094777,2.6601035046341,1.42695054081656,1.15184314421485,1.2178597964584,0,0,0.220528398054962,0.49465875882444,0.322928853391811,0.180938774784468,0,0,0,5.93360966433631,1.19609616558497,0.412773735926445,0.555583582109135,0.941842285023455,0.683471138605126,0.228778173206523,0,0,0,0,0.790839983952838,1.01659733563424,0.86404272657441,0.627264888043406,0.218362563746178,0.674321731924103,0.41326727862668,0,0,0,0,0.299033092087958,0.330916980914195,0.194451188344048,0.387479470433193,0.506868376472335,0.469428954583016,0.5208175393758,0.314578033277133,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.579568782096571,0,0.183151624267265,0,0,49.1334103076848,55.2390283808612,49.8419096692275,52.7589269795121,34.9392085083028,33.9927253825365,47.2515750162264,40.0785870869556,41.6891016265468,37.7965027578829,0.103787347584177,0.798049746802062,0.682934423016537,3.64660075602441,2.09613162627982,2.94149613520023,1.55572709461131,4.12070114477788,3.85103051510178,2.27427490587418,4.56262739802432,4.52703219326583,2.90288673156635,2.88113185821912,3.56099907524802,3.33405583898152,3.36064545240081,3.6652751888104,2.47251540481984,1.91358596174717,1.37147700954166,3.37204031702741,2.86123427936785,2.32554266611726,3.3879376949519,2.70766745253365,4.20734337607377,1.57841826862706,2.58027816307137,3.36685362994643,2.49133538060766,2.75812550651578,2.04615521584845,2.94379998253335,2.70069255373598,5.24602213669686,2.8071793013449,1.93383948643468,1.3390183244819,0.220591419119515,0.231867835620421|short_description=p1@Neto1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:246317 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8R4I7 | |||
|association_with_transcript=-88bp_to_ENSMUST00000058829,NM_144946,uc008fuz.2_5end | |||
|cluster_id=chr18:86564202..86564255,+ | |||
|description=CAGE_peak_1_at_Neto1_5end | |||
|id=chr18:86564202..86564255,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.73e-14!33;CL:0000047!1.73e-14!33;CL:0000031!1.73e-14!33;CL:0000404!1.73e-14!33;CL:0000117!5.37e-12!23;CL:0000337!5.37e-12!23;CL:0000393!7.11e-11!39;CL:0000211!7.11e-11!39;CL:0002319!5.67e-10!43;CL:0000221!2.31e-09!44;CL:0000133!2.31e-09!44;CL:0000055!3.01e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.33e-20,33;CL:0000047,2.33e-20,33;CL:0000031,2.33e-20,33;CL:0000404,2.33e-20,33;CL:0000117,2.29e-16,23;CL:0000337,2.29e-16,23;CL:0000393,1.82e-15,39;CL:0000211,1.82e-15,39;CL:0002319,7.46e-15,43;CL:0000221,2.96e-14,44;CL:0000133,2.96e-14,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.46e-26!73;UBERON:0005743!2.46e-26!73;UBERON:0000073!4.69e-25!75;UBERON:0001016!4.69e-25!75;UBERON:0002346!1.19e-20!71;UBERON:0003075!1.19e-20!71;UBERON:0007284!1.19e-20!71;UBERON:0001049!1.83e-20!52;UBERON:0005068!1.83e-20!52;UBERON:0006241!1.83e-20!52;UBERON:0007135!1.83e-20!52;UBERON:0000955!4.83e-19!50;UBERON:0006238!4.83e-19!50;UBERON:0004121!5.89e-19!102;UBERON:0000924!5.89e-19!102;UBERON:0006601!5.89e-19!102;UBERON:0002616!2.44e-18!49;UBERON:0002020!3.68e-18!34;UBERON:0003056!2.85e-17!49;UBERON:0003080!7.22e-17!40;UBERON:0000033!1.42e-16!63;UBERON:0002780!2.81e-16!39;UBERON:0001890!2.81e-16!39;UBERON:0006240!2.81e-16!39;UBERON:0002791!4.22e-15!29;UBERON:0003528!4.22e-15!29;UBERON:0001893!4.22e-15!29;UBERON:0000956!3.62e-11!21;UBERON:0001869!3.62e-11!21;UBERON:0000203!3.62e-11!21;UBERON:0002619!6.43e-09!17;UBERON:0002021!2.75e-08!10;UBERON:0000411!2.75e-08!10;UBERON:0001950!2.75e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.56e-35,73;UBERON:0001016,1.24e-33,75;UBERON:0000073,1.32e-27,54;UBERON:0001049,3.40e-26,52;UBERON:0005068,3.40e-26,52;UBERON:0006241,3.40e-26,52;UBERON:0007135,3.40e-26,52;UBERON:0002020,3.79e-26,34;UBERON:0002346,8.37e-26,64;UBERON:0003075,8.37e-26,64;UBERON:0007284,8.37e-26,64;UBERON:0004121,3.18e-25,95;UBERON:0000924,3.18e-25,95;UBERON:0006601,3.18e-25,95;UBERON:0000955,4.75e-22,47;UBERON:0006238,4.75e-22,47;UBERON:0003528,9.05e-22,29;UBERON:0002791,9.05e-22,29;UBERON:0001893,9.05e-22,29;UBERON:0003080,1.04e-21,40;UBERON:0002616,4.26e-21,46;UBERON:0002780,6.97e-21,39;UBERON:0001890,6.97e-21,39;UBERON:0006240,6.97e-21,39;UBERON:0010371,2.37e-20,73;UBERON:0003056,6.32e-19,49;UBERON:0000956,3.62e-16,21;UBERON:0001869,3.62e-16,21;UBERON:0000203,3.62e-16,21;UBERON:0002619,5.96e-13,17;UBERON:0010314,1.39e-12,92;UBERON:0002021,4.16e-11,10;UBERON:0000411,4.16e-11,10;UBERON:0001950,4.16e-11,10;UBERON:0002420,9.46e-07,8;UBERON:0007245,9.46e-07,8;UBERON:0010009,9.46e-07,8;UBERON:0010011,9.46e-07,8;UBERON:0000454,9.46e-07,8 | |||
|phase1_expression=0,0,0,0,1.00179145989269,1.34303417529512,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08207792725135,0,0,0.47997726838022,0.22940928106717,0,0.430761996159075,0,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550640256485045,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0,1.82084814773638,2.64495489636016,1.90149421051854,0.338844532069132,0,0,0,0,2.09720077362883,1.15265491596466,4.45865332926454,5.13022565660425,5.46844899513593,6.56997264128748,10.1599528837742,12.3715707207104,8.53024692062304,5.51531271966013,2.20231761998777,7.78892762319645,8.75557239560588,2.63772575460388,2.74462930807229,3.64639359389732,1.95428099300967,3.93933827022176,13.7518422999129,11.490514833473,14.8066548031067,4.65998614563251,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.776813650941515,0.148442139064825,0,0.608930956624282,0.230615497256059,0.452167921657868,0.823120949949934,0,0,0.289198713839823,0,0.323533699894818,0,0.484875253135222,0,1.17112318804619,0.41889341362691,0.255457055208591,0,0,0,6.5907881338122,68.1675898199753,67.6020414367211,51.1043501365293,56.513116070003,13.2984348518118,40.0735919777361,2.24046600470696,0.248813941220186,0,0.631325567659422,1.04096354370163,0.459804208866946,0.540186389416048,1.05493372485001,1.08858398642125,0.640568601424249,0.281105173679186,1.81092359517311,0,0,0.175951124163949,1.09597866213787,0.556094498451196,0,0.823128545631774,0.59710280045548,0,0,0,0,0,0,0.23674473558521,0,0.462801338662135,0,0.268273401399619,0,0,0,0,0,0,0,79.9101804543684,22.1244916615462,0,0.264450566663544,0,0.232236671860439,0.77320476793256,0.80673409849337,0.444756087689741,0,0,0.164698954724011,0,0,0.19496408711912,0.898819408654221,0.648414149624083,0,0.379335801906163,0,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0.500535317148282,0.393117990226406,0.449724224769707,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.648540907100142,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0.37898282354097,1.30371981153621,0.339490171550376,0.469380496577004,0,0,0.585400943573396,0.157635144106191,0.664394068946325,1.2756381492599,0.491589944147214,0.172684981865896,0.144649058581512,0,0,0,0,6.90367536947505,4.92289083687253,0,0,3.47059041357882,3.51394869866975,7.75524231838076,3.82350076724083,1.55959071857676,3.11384183867716,4.04810701674894,2.04579100537918,1.97643888973262,45.9489482483184,0.567760340833074,0.35613120733451,1.30309567482861,0.164970122972535,1.32745138339963,0.485561272309963,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0,1.05418608574999,0,0.680879211507576,0.18006109403131,0.129358683782755,0.643011105094777,2.6601035046341,1.42695054081656,1.15184314421485,1.2178597964584,0,0,0.220528398054962,0.49465875882444,0.322928853391811,0.180938774784468,0,0,0,5.93360966433631,1.19609616558497,0.412773735926445,0.555583582109135,0.941842285023455,0.683471138605126,0.228778173206523,0,0,0,0,0.790839983952838,1.01659733563424,0.86404272657441,0.627264888043406,0.218362563746178,0.674321731924103,0.41326727862668,0,0,0,0,0.299033092087958,0.330916980914195,0.194451188344048,0.387479470433193,0.506868376472335,0.469428954583016,0.5208175393758,0.314578033277133,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.579568782096571,0,0.183151624267265,0,0,49.1334103076848,55.2390283808612,49.8419096692275,52.7589269795121,34.9392085083028,33.9927253825365,47.2515750162264,40.0785870869556,41.6891016265468,37.7965027578829,0.103787347584177,0.798049746802062,0.682934423016537,3.64660075602441,2.09613162627982,2.94149613520023,1.55572709461131,4.12070114477788,3.85103051510178,2.27427490587418,4.56262739802432,4.52703219326583,2.90288673156635,2.88113185821912,3.56099907524802,3.33405583898152,3.36064545240081,3.6652751888104,2.47251540481984,1.91358596174717,1.37147700954166,3.37204031702741,2.86123427936785,2.32554266611726,3.3879376949519,2.70766745253365,4.20734337607377,1.57841826862706,2.58027816307137,3.36685362994643,2.49133538060766,2.75812550651578,2.04615521584845,2.94379998253335,2.70069255373598,5.24602213669686,2.8071793013449,1.93383948643468,1.3390183244819,0.220591419119515,0.231867835620421 | |||
|short_description=p1@Neto1 | |||
}} |
Revision as of 05:24, 6 August 2015
Short description: | p1@Neto1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Neto1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -88bp_to_ENSMUST00000058829, NM_144946, uc008fuz.2_5end |
EntrezGene: | 246317 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.33e-20 | 33 |
neuronal stem cell | 2.33e-20 | 33 |
neuroblast | 2.33e-20 | 33 |
electrically signaling cell | 2.33e-20 | 33 |
CNS neuron (sensu Vertebrata) | 2.29e-16 | 23 |
neuroblast (sensu Vertebrata) | 2.29e-16 | 23 |
electrically responsive cell | 1.82e-15 | 39 |
electrically active cell | 1.82e-15 | 39 |
neural cell | 7.46e-15 | 43 |
ectodermal cell | 2.96e-14 | 44 |
neurectodermal cell | 2.96e-14 | 44 |