FFCP PHASE1:Mm9::chr1:94972803..94972815,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=145|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:94972803..94972815,-|id=chr1:94972803..94972815,-|ontology_enrichment_celltype=CL:0000117!3.58e-20!23;CL:0000337!3.58e-20!23;CL:0002319!1.09e-17!43;CL:0000540!2.16e-17!33;CL:0000047!2.16e-17!33;CL:0000031!2.16e-17!33;CL:0000404!2.16e-17!33;CL:0000221!5.22e-17!44;CL:0000133!5.22e-17!44;CL:0000055!1.69e-14!50;CL:0000393!3.34e-14!39;CL:0000211!3.34e-14!39;CL:0002321!7.16e-08!70;CL:0000220!7.16e-08!70|ontology_enrichment_celltype_v019_2=CL:0000117,5.64e-25,23;CL:0000337,5.64e-25,23;CL:0000540,2.72e-16,33;CL:0000047,2.72e-16,33;CL:0000031,2.72e-16,33;CL:0000404,2.72e-16,33;CL:0000393,3.17e-13,39;CL:0000211,3.17e-13,39;CL:0002319,1.16e-11,43;CL:0000221,2.59e-11,44;CL:0000133,2.59e-11,44;CL:0002610,6.14e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.06e-40!75;UBERON:0001016!4.06e-40!75;UBERON:0001017!2.38e-39!73;UBERON:0005743!2.38e-39!73;UBERON:0001049!2.77e-36!52;UBERON:0005068!2.77e-36!52;UBERON:0006241!2.77e-36!52;UBERON:0007135!2.77e-36!52;UBERON:0002616!2.42e-34!49;UBERON:0004121!3.86e-34!102;UBERON:0000924!3.86e-34!102;UBERON:0006601!3.86e-34!102;UBERON:0002346!1.32e-33!71;UBERON:0003075!1.32e-33!71;UBERON:0007284!1.32e-33!71;UBERON:0000955!2.69e-33!50;UBERON:0006238!2.69e-33!50;UBERON:0000033!2.56e-30!63;UBERON:0002020!1.00e-28!34;UBERON:0003080!8.26e-28!40;UBERON:0002780!6.64e-27!39;UBERON:0001890!6.64e-27!39;UBERON:0006240!6.64e-27!39;UBERON:0003056!9.87e-27!49;UBERON:0002791!2.38e-24!29;UBERON:0003528!2.38e-24!29;UBERON:0001893!2.38e-24!29;UBERON:0007811!3.02e-17!86;UBERON:0000956!3.05e-17!21;UBERON:0001869!3.05e-17!21;UBERON:0000203!3.05e-17!21;UBERON:0000153!2.71e-14!94;UBERON:0002619!7.15e-14!17;UBERON:0002021!3.43e-11!10;UBERON:0000411!3.43e-11!10;UBERON:0001950!3.43e-11!10;UBERON:0000025!1.63e-09!114;UBERON:0003076!1.37e-08!12;UBERON:0003057!1.37e-08!12;UBERON:0004111!2.54e-08!122;UBERON:0002420!3.32e-08!8;UBERON:0007245!3.32e-08!8;UBERON:0010009!3.32e-08!8;UBERON:0010011!3.32e-08!8;UBERON:0000454!3.32e-08!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.88e-43,54;UBERON:0002020,4.27e-36,34;UBERON:0001049,9.40e-36,52;UBERON:0005068,9.40e-36,52;UBERON:0006241,9.40e-36,52;UBERON:0007135,9.40e-36,52;UBERON:0001017,1.56e-34,73;UBERON:0001016,1.94e-33,75;UBERON:0002346,3.70e-30,64;UBERON:0003075,3.70e-30,64;UBERON:0007284,3.70e-30,64;UBERON:0002616,2.01e-29,46;UBERON:0000955,1.12e-28,47;UBERON:0006238,1.12e-28,47;UBERON:0003528,1.24e-28,29;UBERON:0002791,1.24e-28,29;UBERON:0001893,1.24e-28,29;UBERON:0004121,7.54e-27,95;UBERON:0000924,7.54e-27,95;UBERON:0006601,7.54e-27,95;UBERON:0010371,1.17e-25,73;UBERON:0003080,2.90e-24,40;UBERON:0002780,1.36e-22,39;UBERON:0001890,1.36e-22,39;UBERON:0006240,1.36e-22,39;UBERON:0002021,3.04e-21,10;UBERON:0000411,3.04e-21,10;UBERON:0001950,3.04e-21,10;UBERON:0003056,5.55e-21,49;UBERON:0010314,4.82e-19,92;UBERON:0000956,1.11e-18,21;UBERON:0001869,1.11e-18,21;UBERON:0000203,1.11e-18,21;UBERON:0002619,3.28e-14,17;UBERON:0000025,6.64e-13,114;UBERON:0003076,9.05e-12,12;UBERON:0003057,9.05e-12,12;UBERON:0004111,1.21e-11,122;UBERON:0002420,4.01e-11,8;UBERON:0007245,4.01e-11,8;UBERON:0010009,4.01e-11,8;UBERON:0010011,4.01e-11,8;UBERON:0000454,4.01e-11,8;UBERON:0004684,6.14e-09,3;UBERON:0002275,6.14e-09,3;UBERON:0011216,9.57e-09,194;UBERON:0001948,1.27e-08,5;UBERON:0002315,1.27e-08,5;UBERON:0000369,3.14e-08,5;UBERON:0002435,3.14e-08,5;UBERON:0000204,3.14e-08,5;UBERON:0010082,3.14e-08,5;UBERON:0002240,3.52e-07,6;UBERON:0005174,3.52e-07,6;UBERON:0001137,3.52e-07,6;UBERON:0000483,5.00e-07,174;UBERON:0000119,7.12e-07,176|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0.972149495371417,0.419959264876088,0,0,0,0,0.257259436035947,0,0,1.21389876515759,0.528990979272033,1.26766280701236,0.338844532069132,0,0,0,0,0,0.768436610643109,0.933206510776299,2.29510095163874,1.26194976810829,1.42825492201902,2.20868540951614,0.367472397644862,1.0543001812006,0.919218786610021,3.30347642998166,2.29837208553338,4.91540906419979,1.45074916503213,2.65314166446988,0.52091337055676,2.23346399201105,0.56276261003168,4.43114918552749,2.35702868378934,4.9830088279686,0.186399445825301,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505524445014783,0.11418387971906,0,0.148442139064825,0.346970653532272,0,0,0.150722640552623,0.352766121407114,0,0,0,0,0,0,0,0,1.17112318804619,1.04723353406728,0,0,0,0,1.3481157546434,1.83000241127451,1.63350657746724,1.56441888173049,1.27857728665165,2.49345653471472,0.973447578406546,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0.512454881139399,0.374806898238915,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0.07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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=145 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:94972803..94972815,- | |||
|description=CAGE_peak_at_chr1:94972803..94972815,- | |||
|id=chr1:94972803..94972815,- | |||
|ontology_enrichment_celltype=CL:0000117!3.58e-20!23;CL:0000337!3.58e-20!23;CL:0002319!1.09e-17!43;CL:0000540!2.16e-17!33;CL:0000047!2.16e-17!33;CL:0000031!2.16e-17!33;CL:0000404!2.16e-17!33;CL:0000221!5.22e-17!44;CL:0000133!5.22e-17!44;CL:0000055!1.69e-14!50;CL:0000393!3.34e-14!39;CL:0000211!3.34e-14!39;CL:0002321!7.16e-08!70;CL:0000220!7.16e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.64e-25,23;CL:0000337,5.64e-25,23;CL:0000540,2.72e-16,33;CL:0000047,2.72e-16,33;CL:0000031,2.72e-16,33;CL:0000404,2.72e-16,33;CL:0000393,3.17e-13,39;CL:0000211,3.17e-13,39;CL:0002319,1.16e-11,43;CL:0000221,2.59e-11,44;CL:0000133,2.59e-11,44;CL:0002610,6.14e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.06e-40!75;UBERON:0001016!4.06e-40!75;UBERON:0001017!2.38e-39!73;UBERON:0005743!2.38e-39!73;UBERON:0001049!2.77e-36!52;UBERON:0005068!2.77e-36!52;UBERON:0006241!2.77e-36!52;UBERON:0007135!2.77e-36!52;UBERON:0002616!2.42e-34!49;UBERON:0004121!3.86e-34!102;UBERON:0000924!3.86e-34!102;UBERON:0006601!3.86e-34!102;UBERON:0002346!1.32e-33!71;UBERON:0003075!1.32e-33!71;UBERON:0007284!1.32e-33!71;UBERON:0000955!2.69e-33!50;UBERON:0006238!2.69e-33!50;UBERON:0000033!2.56e-30!63;UBERON:0002020!1.00e-28!34;UBERON:0003080!8.26e-28!40;UBERON:0002780!6.64e-27!39;UBERON:0001890!6.64e-27!39;UBERON:0006240!6.64e-27!39;UBERON:0003056!9.87e-27!49;UBERON:0002791!2.38e-24!29;UBERON:0003528!2.38e-24!29;UBERON:0001893!2.38e-24!29;UBERON:0007811!3.02e-17!86;UBERON:0000956!3.05e-17!21;UBERON:0001869!3.05e-17!21;UBERON:0000203!3.05e-17!21;UBERON:0000153!2.71e-14!94;UBERON:0002619!7.15e-14!17;UBERON:0002021!3.43e-11!10;UBERON:0000411!3.43e-11!10;UBERON:0001950!3.43e-11!10;UBERON:0000025!1.63e-09!114;UBERON:0003076!1.37e-08!12;UBERON:0003057!1.37e-08!12;UBERON:0004111!2.54e-08!122;UBERON:0002420!3.32e-08!8;UBERON:0007245!3.32e-08!8;UBERON:0010009!3.32e-08!8;UBERON:0010011!3.32e-08!8;UBERON:0000454!3.32e-08!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.88e-43,54;UBERON:0002020,4.27e-36,34;UBERON:0001049,9.40e-36,52;UBERON:0005068,9.40e-36,52;UBERON:0006241,9.40e-36,52;UBERON:0007135,9.40e-36,52;UBERON:0001017,1.56e-34,73;UBERON:0001016,1.94e-33,75;UBERON:0002346,3.70e-30,64;UBERON:0003075,3.70e-30,64;UBERON:0007284,3.70e-30,64;UBERON:0002616,2.01e-29,46;UBERON:0000955,1.12e-28,47;UBERON:0006238,1.12e-28,47;UBERON:0003528,1.24e-28,29;UBERON:0002791,1.24e-28,29;UBERON:0001893,1.24e-28,29;UBERON:0004121,7.54e-27,95;UBERON:0000924,7.54e-27,95;UBERON:0006601,7.54e-27,95;UBERON:0010371,1.17e-25,73;UBERON:0003080,2.90e-24,40;UBERON:0002780,1.36e-22,39;UBERON:0001890,1.36e-22,39;UBERON:0006240,1.36e-22,39;UBERON:0002021,3.04e-21,10;UBERON:0000411,3.04e-21,10;UBERON:0001950,3.04e-21,10;UBERON:0003056,5.55e-21,49;UBERON:0010314,4.82e-19,92;UBERON:0000956,1.11e-18,21;UBERON:0001869,1.11e-18,21;UBERON:0000203,1.11e-18,21;UBERON:0002619,3.28e-14,17;UBERON:0000025,6.64e-13,114;UBERON:0003076,9.05e-12,12;UBERON:0003057,9.05e-12,12;UBERON:0004111,1.21e-11,122;UBERON:0002420,4.01e-11,8;UBERON:0007245,4.01e-11,8;UBERON:0010009,4.01e-11,8;UBERON:0010011,4.01e-11,8;UBERON:0000454,4.01e-11,8;UBERON:0004684,6.14e-09,3;UBERON:0002275,6.14e-09,3;UBERON:0011216,9.57e-09,194;UBERON:0001948,1.27e-08,5;UBERON:0002315,1.27e-08,5;UBERON:0000369,3.14e-08,5;UBERON:0002435,3.14e-08,5;UBERON:0000204,3.14e-08,5;UBERON:0010082,3.14e-08,5;UBERON:0002240,3.52e-07,6;UBERON:0005174,3.52e-07,6;UBERON:0001137,3.52e-07,6;UBERON:0000483,5.00e-07,174;UBERON:0000119,7.12e-07,176 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0.972149495371417,0.419959264876088,0,0,0,0,0.257259436035947,0,0,1.21389876515759,0.528990979272033,1.26766280701236,0.338844532069132,0,0,0,0,0,0.768436610643109,0.933206510776299,2.29510095163874,1.26194976810829,1.42825492201902,2.20868540951614,0.367472397644862,1.0543001812006,0.919218786610021,3.30347642998166,2.29837208553338,4.91540906419979,1.45074916503213,2.65314166446988,0.52091337055676,2.23346399201105,0.56276261003168,4.43114918552749,2.35702868378934,4.9830088279686,0.186399445825301,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505524445014783,0.11418387971906,0,0.148442139064825,0.346970653532272,0,0,0.150722640552623,0.352766121407114,0,0,0,0,0,0,0,0,1.17112318804619,1.04723353406728,0,0,0,0,1.3481157546434,1.83000241127451,1.63350657746724,1.56441888173049,1.27857728665165,2.49345653471472,0.973447578406546,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0.512454881139399,0.374806898238915,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0.345369963731791,0,0,0,0,0,1.12385412991454,1.40654023910644,0,0,0,0,0.215423397732799,0,0,0.283076530788832,0.809621403349789,0,0.395287777946524,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0.388076051348264,0.214337035031592,0,0,0.329098041204242,0.304464949114599,0,0,0,0.16488625294148,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51801474093653,3.68260189205742,5.72895513439397,3.95262319390481,2.74033007908257,3.7769694869485,0.675022500231806,1.80128481289688,2.71885445390523,3.62432218226274,0,0,0.170733605754134,0,0,0.551530525350042,0.222246727801615,0.412070114477788,0.320919209591815,0,0.25347929989024,0,0.37456602987953,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0,0,0.294397840268795,0.342869252385415,0.177475806159338,0.476872379894642,0,0.188218760830661,0,0.548783918618318,0,0.407412341537585,0,0.118635018124174,0.29551344712669,0.409231043169689,0.309873682371932,0,0.249810577937946,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr1:94972803..94972815,- | |||
}} |
Latest revision as of 05:38, 6 August 2015
Short description: | p@chr1:94972803..94972815, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:94972803..94972815, - |
Coexpression cluster: | MCL_coexpression_mm9:145 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.64e-25 | 23 |
neuroblast (sensu Vertebrata) | 5.64e-25 | 23 |
neuron | 2.72e-16 | 33 |
neuronal stem cell | 2.72e-16 | 33 |
neuroblast | 2.72e-16 | 33 |
electrically signaling cell | 2.72e-16 | 33 |
electrically responsive cell | 3.17e-13 | 39 |
electrically active cell | 3.17e-13 | 39 |
neural cell | 1.16e-11 | 43 |
ectodermal cell | 2.59e-11 | 44 |
neurectodermal cell | 2.59e-11 | 44 |
raphe nuclei neuron | 6.14e-09 | 3 |