FFCP PHASE1:Mm9::chr2:102498909..102498921,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=20511|HGNC=|MCL_coexpression_id=1|UniProt=P43006,Q3UYK6|association_with_transcript=69bp_to_NM_001077514,uc008lid.2_5end|description=CAGE_peak_6_at_Slc1a2_5end|id=chr2:102498909..102498921,+|ontology_enrichment_celltype=CL:0002319!5.68e-17!43;CL:0000221!2.78e-16!44;CL:0000133!2.78e-16!44;CL:0000117!4.14e-13!23;CL:0000337!4.14e-13!23;CL:0000055!8.85e-13!50;CL:0000540!1.49e-12!33;CL:0000047!1.49e-12!33;CL:0000031!1.49e-12!33;CL:0000404!1.49e-12!33;CL:0000393!3.49e-09!39;CL:0000211!3.49e-09!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.14e-15,23;CL:0000337,1.14e-15,23;CL:0002319,4.54e-13,43;CL:0000221,1.22e-12,44;CL:0000133,1.22e-12,44;CL:0000540,1.27e-09,33;CL:0000047,1.27e-09,33;CL:0000031,1.27e-09,33;CL:0000404,1.27e-09,33;CL:0000393,1.61e-07,39;CL:0000211,1.61e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.73e-33!73;UBERON:0005743!8.73e-33!73;UBERON:0000073!1.76e-32!75;UBERON:0001016!1.76e-32!75;UBERON:0004121!1.20e-26!102;UBERON:0000924!1.20e-26!102;UBERON:0006601!1.20e-26!102;UBERON:0001049!1.97e-24!52;UBERON:0005068!1.97e-24!52;UBERON:0006241!1.97e-24!52;UBERON:0007135!1.97e-24!52;UBERON:0000033!2.03e-24!63;UBERON:0002020!8.85e-24!34;UBERON:0000955!4.47e-23!50;UBERON:0006238!4.47e-23!50;UBERON:0002346!1.09e-22!71;UBERON:0003075!1.09e-22!71;UBERON:0007284!1.09e-22!71;UBERON:0002616!2.97e-22!49;UBERON:0002791!6.81e-20!29;UBERON:0003528!6.81e-20!29;UBERON:0001893!6.81e-20!29;UBERON:0003056!2.66e-18!49;UBERON:0003080!1.65e-15!40;UBERON:0002780!9.62e-15!39;UBERON:0001890!9.62e-15!39;UBERON:0006240!9.62e-15!39;UBERON:0002619!4.14e-14!17;UBERON:0000956!4.42e-14!21;UBERON:0001869!4.42e-14!21;UBERON:0000203!4.42e-14!21;UBERON:0007811!1.29e-13!86;UBERON:0000153!7.04e-13!94;UBERON:0002021!7.70e-11!10;UBERON:0000411!7.70e-11!10;UBERON:0001950!7.70e-11!10;UBERON:0003076!5.28e-10!12;UBERON:0003057!5.28e-10!12;UBERON:0002420!5.22e-07!8;UBERON:0007245!5.22e-07!8;UBERON:0010009!5.22e-07!8;UBERON:0010011!5.22e-07!8;UBERON:0000454!5.22e-07!8;UBERON:0000025!5.70e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.93e-42,73;UBERON:0000073,1.65e-40,54;UBERON:0001016,2.40e-40,75;UBERON:0001049,1.86e-37,52;UBERON:0005068,1.86e-37,52;UBERON:0006241,1.86e-37,52;UBERON:0007135,1.86e-37,52;UBERON:0002346,7.37e-36,64;UBERON:0003075,7.37e-36,64;UBERON:0007284,7.37e-36,64;UBERON:0004121,9.51e-36,95;UBERON:0000924,9.51e-36,95;UBERON:0006601,9.51e-36,95;UBERON:0002020,1.16e-33,34;UBERON:0000955,1.28e-30,47;UBERON:0006238,1.28e-30,47;UBERON:0010371,4.33e-30,73;UBERON:0002616,3.08e-29,46;UBERON:0003528,7.11e-27,29;UBERON:0002791,7.11e-27,29;UBERON:0001893,7.11e-27,29;UBERON:0003056,1.69e-24,49;UBERON:0003080,1.17e-23,40;UBERON:0002780,2.51e-22,39;UBERON:0001890,2.51e-22,39;UBERON:0006240,2.51e-22,39;UBERON:0010314,1.25e-21,92;UBERON:0002619,1.17e-18,17;UBERON:0002021,2.55e-18,10;UBERON:0000411,2.55e-18,10;UBERON:0001950,2.55e-18,10;UBERON:0000956,7.62e-17,21;UBERON:0001869,7.62e-17,21;UBERON:0000203,7.62e-17,21;UBERON:0003076,1.83e-14,12;UBERON:0003057,1.83e-14,12;UBERON:0000025,1.23e-11,114;UBERON:0002420,2.07e-11,8;UBERON:0007245,2.07e-11,8;UBERON:0010009,2.07e-11,8;UBERON:0010011,2.07e-11,8;UBERON:0000454,2.07e-11,8;UBERON:0004111,3.02e-10,122;UBERON:0002240,1.65e-09,6;UBERON:0005174,1.65e-09,6;UBERON:0001137,1.65e-09,6;UBERON:0011216,2.15e-08,194;UBERON:0001948,5.96e-08,5;UBERON:0002315,5.96e-08,5;UBERON:0000369,2.75e-07,5;UBERON:0002435,2.75e-07,5;UBERON:0000204,2.75e-07,5;UBERON:0010082,2.75e-07,5;UBERON:0002950,3.80e-07,4;UBERON:0001891,3.80e-07,4;UBERON:0009616,3.80e-07,4;UBERON:0010286,3.80e-07,4|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.48380953329414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.09012578190223,3.73466510648602,4.6663175777828,0.699932108126813,1.43752564364972,0,0,0,0,0,0,1.01158230429799,1.5869729378161,2.53532561402472,0,0,0,0,0,2.09720077362883,2.30530983192933,0.103689612308478,0,0.210324961351382,13.139945282575,7.50953039235486,0.122490799214954,0.191690942036473,0.919218786610021,33.0347642998166,43.0306329347083,44.6995011775669,1.18697658957174,1.55528994124096,1.04182674111352,20.6595419261022,19.6966913511088,31.6292372897997,17.0884579574727,10.6778760599327,3.16879057903011,0,0.377857800533928,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,9.66176630138106,10.4723353406728,0,0,0,0,35.3505908995382,51.2400675156862,2.63874139437015,78.568592726909,60.0931324726277,40.9342447782333,49.9703090248694,0.101839363850316,0,0,5.26104639716185,0,0,0.720248519221397,0.90422890701429,0.816437989815934,1.0249097622788,1.87403449119458,9.05461797586555,0,0,0.351902248327898,0.43839146485515,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,50.8901675525188,3.39585220851639,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.335012514883631,0.238043640886014,0,0,0.221464689648775,0,0,0.172684981865896,0.144649058581512,0,0,0,0,42.7064569367527,40.7896669340867,0,0,0.631016438832513,0,0,0,0.668396022247182,0,0.404810701674894,0.584511715822624,0.395287777946524,29.2402397943844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,46.5417508046379,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,64.3817100583456,64.9058583475119,66.45587955897,80.4272893368458,73.9889121352294,76.2947836363598,54.6768225187763,42.3301931030767,46.2205257163889,47.6339486811674,0.518936737920883,1.19707462020309,0.512200817262403,0,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.760437899670719,0.565879024158229,0.187283014939765,0.192075457214608,0.229741875822453,0.952587382566147,0.347652977834566,0,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,0,0,0.752875043322645,0.676916863133412,0.365855945745545,0.263069711437843,0.271608227691724,1.68342681497322,0.237270036248348,0.492522411877817,0.818462086339379,0.309873682371932,0.385813221962283,0,0.467863216890817,0,0.382576664137687,1.54413993383661,0|short_description=p6@Slc1a2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20511 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P43006,uniprot:Q3UYK6 | |||
|association_with_transcript=69bp_to_NM_001077514,uc008lid.2_5end | |||
|cluster_id=chr2:102498909..102498921,+ | |||
|description=CAGE_peak_6_at_Slc1a2_5end | |||
|id=chr2:102498909..102498921,+ | |||
|ontology_enrichment_celltype=CL:0002319!5.68e-17!43;CL:0000221!2.78e-16!44;CL:0000133!2.78e-16!44;CL:0000117!4.14e-13!23;CL:0000337!4.14e-13!23;CL:0000055!8.85e-13!50;CL:0000540!1.49e-12!33;CL:0000047!1.49e-12!33;CL:0000031!1.49e-12!33;CL:0000404!1.49e-12!33;CL:0000393!3.49e-09!39;CL:0000211!3.49e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.14e-15,23;CL:0000337,1.14e-15,23;CL:0002319,4.54e-13,43;CL:0000221,1.22e-12,44;CL:0000133,1.22e-12,44;CL:0000540,1.27e-09,33;CL:0000047,1.27e-09,33;CL:0000031,1.27e-09,33;CL:0000404,1.27e-09,33;CL:0000393,1.61e-07,39;CL:0000211,1.61e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.73e-33!73;UBERON:0005743!8.73e-33!73;UBERON:0000073!1.76e-32!75;UBERON:0001016!1.76e-32!75;UBERON:0004121!1.20e-26!102;UBERON:0000924!1.20e-26!102;UBERON:0006601!1.20e-26!102;UBERON:0001049!1.97e-24!52;UBERON:0005068!1.97e-24!52;UBERON:0006241!1.97e-24!52;UBERON:0007135!1.97e-24!52;UBERON:0000033!2.03e-24!63;UBERON:0002020!8.85e-24!34;UBERON:0000955!4.47e-23!50;UBERON:0006238!4.47e-23!50;UBERON:0002346!1.09e-22!71;UBERON:0003075!1.09e-22!71;UBERON:0007284!1.09e-22!71;UBERON:0002616!2.97e-22!49;UBERON:0002791!6.81e-20!29;UBERON:0003528!6.81e-20!29;UBERON:0001893!6.81e-20!29;UBERON:0003056!2.66e-18!49;UBERON:0003080!1.65e-15!40;UBERON:0002780!9.62e-15!39;UBERON:0001890!9.62e-15!39;UBERON:0006240!9.62e-15!39;UBERON:0002619!4.14e-14!17;UBERON:0000956!4.42e-14!21;UBERON:0001869!4.42e-14!21;UBERON:0000203!4.42e-14!21;UBERON:0007811!1.29e-13!86;UBERON:0000153!7.04e-13!94;UBERON:0002021!7.70e-11!10;UBERON:0000411!7.70e-11!10;UBERON:0001950!7.70e-11!10;UBERON:0003076!5.28e-10!12;UBERON:0003057!5.28e-10!12;UBERON:0002420!5.22e-07!8;UBERON:0007245!5.22e-07!8;UBERON:0010009!5.22e-07!8;UBERON:0010011!5.22e-07!8;UBERON:0000454!5.22e-07!8;UBERON:0000025!5.70e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.93e-42,73;UBERON:0000073,1.65e-40,54;UBERON:0001016,2.40e-40,75;UBERON:0001049,1.86e-37,52;UBERON:0005068,1.86e-37,52;UBERON:0006241,1.86e-37,52;UBERON:0007135,1.86e-37,52;UBERON:0002346,7.37e-36,64;UBERON:0003075,7.37e-36,64;UBERON:0007284,7.37e-36,64;UBERON:0004121,9.51e-36,95;UBERON:0000924,9.51e-36,95;UBERON:0006601,9.51e-36,95;UBERON:0002020,1.16e-33,34;UBERON:0000955,1.28e-30,47;UBERON:0006238,1.28e-30,47;UBERON:0010371,4.33e-30,73;UBERON:0002616,3.08e-29,46;UBERON:0003528,7.11e-27,29;UBERON:0002791,7.11e-27,29;UBERON:0001893,7.11e-27,29;UBERON:0003056,1.69e-24,49;UBERON:0003080,1.17e-23,40;UBERON:0002780,2.51e-22,39;UBERON:0001890,2.51e-22,39;UBERON:0006240,2.51e-22,39;UBERON:0010314,1.25e-21,92;UBERON:0002619,1.17e-18,17;UBERON:0002021,2.55e-18,10;UBERON:0000411,2.55e-18,10;UBERON:0001950,2.55e-18,10;UBERON:0000956,7.62e-17,21;UBERON:0001869,7.62e-17,21;UBERON:0000203,7.62e-17,21;UBERON:0003076,1.83e-14,12;UBERON:0003057,1.83e-14,12;UBERON:0000025,1.23e-11,114;UBERON:0002420,2.07e-11,8;UBERON:0007245,2.07e-11,8;UBERON:0010009,2.07e-11,8;UBERON:0010011,2.07e-11,8;UBERON:0000454,2.07e-11,8;UBERON:0004111,3.02e-10,122;UBERON:0002240,1.65e-09,6;UBERON:0005174,1.65e-09,6;UBERON:0001137,1.65e-09,6;UBERON:0011216,2.15e-08,194;UBERON:0001948,5.96e-08,5;UBERON:0002315,5.96e-08,5;UBERON:0000369,2.75e-07,5;UBERON:0002435,2.75e-07,5;UBERON:0000204,2.75e-07,5;UBERON:0010082,2.75e-07,5;UBERON:0002950,3.80e-07,4;UBERON:0001891,3.80e-07,4;UBERON:0009616,3.80e-07,4;UBERON:0010286,3.80e-07,4 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.48380953329414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.09012578190223,3.73466510648602,4.6663175777828,0.699932108126813,1.43752564364972,0,0,0,0,0,0,1.01158230429799,1.5869729378161,2.53532561402472,0,0,0,0,0,2.09720077362883,2.30530983192933,0.103689612308478,0,0.210324961351382,13.139945282575,7.50953039235486,0.122490799214954,0.191690942036473,0.919218786610021,33.0347642998166,43.0306329347083,44.6995011775669,1.18697658957174,1.55528994124096,1.04182674111352,20.6595419261022,19.6966913511088,31.6292372897997,17.0884579574727,10.6778760599327,3.16879057903011,0,0.377857800533928,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,9.66176630138106,10.4723353406728,0,0,0,0,35.3505908995382,51.2400675156862,2.63874139437015,78.568592726909,60.0931324726277,40.9342447782333,49.9703090248694,0.101839363850316,0,0,5.26104639716185,0,0,0.720248519221397,0.90422890701429,0.816437989815934,1.0249097622788,1.87403449119458,9.05461797586555,0,0,0.351902248327898,0.43839146485515,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,50.8901675525188,3.39585220851639,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.335012514883631,0.238043640886014,0,0,0.221464689648775,0,0,0.172684981865896,0.144649058581512,0,0,0,0,42.7064569367527,40.7896669340867,0,0,0.631016438832513,0,0,0,0.668396022247182,0,0.404810701674894,0.584511715822624,0.395287777946524,29.2402397943844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,46.5417508046379,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,64.3817100583456,64.9058583475119,66.45587955897,80.4272893368458,73.9889121352294,76.2947836363598,54.6768225187763,42.3301931030767,46.2205257163889,47.6339486811674,0.518936737920883,1.19707462020309,0.512200817262403,0,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.760437899670719,0.565879024158229,0.187283014939765,0.192075457214608,0.229741875822453,0.952587382566147,0.347652977834566,0,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,0,0,0.752875043322645,0.676916863133412,0.365855945745545,0.263069711437843,0.271608227691724,1.68342681497322,0.237270036248348,0.492522411877817,0.818462086339379,0.309873682371932,0.385813221962283,0,0.467863216890817,0,0.382576664137687,1.54413993383661,0 | |||
|short_description=p6@Slc1a2 | |||
}} |
Revision as of 07:00, 6 August 2015
Short description: | p6@Slc1a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Slc1a2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 69bp_to_NM_001077514, uc008lid.2_5end |
EntrezGene: | 20511 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.14e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.14e-15 | 23 |
neural cell | 4.54e-13 | 43 |
ectodermal cell | 1.22e-12 | 44 |
neurectodermal cell | 1.22e-12 | 44 |
neuron | 1.27e-09 | 33 |
neuronal stem cell | 1.27e-09 | 33 |
neuroblast | 1.27e-09 | 33 |
electrically signaling cell | 1.27e-09 | 33 |
electrically responsive cell | 1.61e-07 | 39 |
electrically active cell | 1.61e-07 | 39 |