FFCP PHASE1:Mm9::chr5:125342499..125342518,-: Difference between revisions
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{{FFCP|EntrezGene=215707|HGNC=|MCL_coexpression_id=709|UniProt=Q8VDN4|association_with_transcript=72bp_to_NM_144819,uc008zqr.1_5end|description=CAGE_peak_4_at_Ccdc92_5end|id=chr5:125342499..125342518,-|ontology_enrichment_celltype=CL:0000117!4.51e-09!23;CL:0000337!4.51e-09!23;CL:0000221!3.92e-07!44;CL:0000133!3.92e-07!44;CL:0002319!5.49e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,2.02e-11,23;CL:0000337,2.02e-11,23;CL:0002319,4.54e-08,43;CL:0000221,1.05e-07,44;CL:0000133,1.05e-07,44;CL:0000540,7.28e-07,33;CL:0000047,7.28e-07,33;CL:0000031,7.28e-07,33;CL:0000404,7.28e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.94e-23!52;UBERON:0005068!1.94e-23!52;UBERON:0006241!1.94e-23!52;UBERON:0007135!1.94e-23!52;UBERON:0000955!6.87e-23!50;UBERON:0006238!6.87e-23!50;UBERON:0002346!8.40e-23!71;UBERON:0003075!8.40e-23!71;UBERON:0007284!8.40e-23!71;UBERON:0002616!2.75e-22!49;UBERON:0001017!4.58e-22!73;UBERON:0005743!4.58e-22!73;UBERON:0000073!7.44e-22!75;UBERON:0001016!7.44e-22!75;UBERON:0000153!1.99e-21!94;UBERON:0007811!2.72e-21!86;UBERON:0000033!4.49e-21!63;UBERON:0004121!3.54e-20!102;UBERON:0000924!3.54e-20!102;UBERON:0006601!3.54e-20!102;UBERON:0003080!1.18e-16!40;UBERON:0003056!2.15e-16!49;UBERON:0002780!5.38e-16!39;UBERON:0001890!5.38e-16!39;UBERON:0006240!5.38e-16!39;UBERON:0002020!2.00e-14!34;UBERON:0002791!3.67e-12!29;UBERON:0003528!3.67e-12!29;UBERON:0001893!3.67e-12!29;UBERON:0000956!1.56e-08!21;UBERON:0001869!1.56e-08!21;UBERON:0000203!1.56e-08!21;UBERON:0000475!3.18e-08!200;UBERON:0003076!1.80e-07!12;UBERON:0003057!1.80e-07!12;UBERON:0002619!2.94e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.04e-33,54;UBERON:0001049,1.21e-31,52;UBERON:0005068,1.21e-31,52;UBERON:0006241,1.21e-31,52;UBERON:0007135,1.21e-31,52;UBERON:0002346,1.65e-28,64;UBERON:0003075,1.65e-28,64;UBERON:0007284,1.65e-28,64;UBERON:0001017,2.25e-28,73;UBERON:0001016,3.66e-28,75;UBERON:0000955,1.16e-27,47;UBERON:0006238,1.16e-27,47;UBERON:0002616,8.73e-27,46;UBERON:0010371,1.33e-23,73;UBERON:0004121,1.58e-22,95;UBERON:0000924,1.58e-22,95;UBERON:0006601,1.58e-22,95;UBERON:0003080,1.50e-21,40;UBERON:0002780,1.39e-20,39;UBERON:0001890,1.39e-20,39;UBERON:0006240,1.39e-20,39;UBERON:0003056,1.11e-19,49;UBERON:0002020,3.73e-19,34;UBERON:0003528,9.14e-16,29;UBERON:0002791,9.14e-16,29;UBERON:0001893,9.14e-16,29;UBERON:0010314,1.09e-15,92;UBERON:0003076,1.53e-10,12;UBERON:0003057,1.53e-10,12;UBERON:0000956,2.20e-10,21;UBERON:0001869,2.20e-10,21;UBERON:0000203,2.20e-10,21;UBERON:0002619,1.82e-08,17;UBERON:0000025,3.60e-08,114;UBERON:0000119,8.02e-08,176;UBERON:0004111,1.10e-07,122;UBERON:0000483,1.20e-07,174;UBERON:0011216,2.41e-07,194;UBERON:0002021,4.86e-07,10;UBERON:0000411,4.86e-07,10;UBERON:0001950,4.86e-07,10;UBERON:0002420,8.72e-07,8;UBERON:0007245,8.72e-07,8;UBERON:0010009,8.72e-07,8;UBERON:0010011,8.72e-07,8;UBERON:0000454,8.72e-07,8|phase1_expression=0.80074423552397,0.697950815278722,0,0,0,0.16787927191189,0.467225281191051,3.22808308603941,2.111830832275,2.57470978954193,0,0.159544317990673,1.71200729931206,2.36035086531293,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0,8.50432901510698,0.0992909512008853,0,0.47997726838022,0,0,0.86152399231815,0.430942465371778,0,0,0,0.635030673459631,3.07532393792285,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.506884656097573,0,1.56478268869608,1.74420125104357,2.63623419281366,3.69416808241138,0.839918529752175,0,0.335565212115473,5.80289713609076,4.7053131879945,0,0,1.03134418455488,3.23706337375356,0.528990979272033,3.80298842103708,0,1.77858959222228,0,0,0,0.599200221036809,3.07374644257244,1.34796496001021,1.21505344498522,1.47227472945967,2.85650984403804,1.98781686856452,0.367472397644862,1.24599112323707,0.919218786610021,9.91042928994498,11.4918604276669,11.2132769277058,1.97829431595291,2.10421580285542,1.04182674111352,12.5632349550621,5.06486349028512,7.94550888439413,2.35702868378934,1.85083185038834,5.03278503728312,0.227178579999552,1.28471652181535,0,0.860423876981386,0,0,0,0,1.40444420131752,0,0,0,0.985903938436763,0,0,0,0,0,0,1.37020655662872,2.07150306917737,0.890652834388949,0.693941307064543,0.913396434936424,0.691846491768175,0.904335843315735,1.52865319276416,0.376999773989026,0.741584903203122,0.289198713839823,0,0.161766849947409,0.220841518460394,0.484875253135222,0,14.3462590535658,13.823482649688,0.510914110417183,0,0,0,10.3355541189328,4.11750542536764,2.26177833803156,7.12679712788333,4.09144731728529,7.89594569326328,7.46309810111685,0.509196819251581,0.373220911830279,0.252722758433675,0,0.650602214813519,0.459804208866946,1.0803727788321,0.90422890701429,1.63287597963187,0.640568601424249,1.40552586839593,3.10444044886819,0.431135985865684,1.13463648100692,1.05570674498369,0.219195732427575,0.278047249225598,1.0447564995665,0.61734640922383,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0.540186184383045,0,0.393528463494808,0.308534225774757,0,0,0.233530684734339,0.3291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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:215707 | |||
|HGNC= | |||
|MCL_coexpression_id=709 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8VDN4 | |||
|association_with_transcript=72bp_to_NM_144819,uc008zqr.1_5end | |||
|cluster_id=chr5:125342499..125342518,- | |||
|description=CAGE_peak_4_at_Ccdc92_5end | |||
|id=chr5:125342499..125342518,- | |||
|ontology_enrichment_celltype=CL:0000117!4.51e-09!23;CL:0000337!4.51e-09!23;CL:0000221!3.92e-07!44;CL:0000133!3.92e-07!44;CL:0002319!5.49e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.02e-11,23;CL:0000337,2.02e-11,23;CL:0002319,4.54e-08,43;CL:0000221,1.05e-07,44;CL:0000133,1.05e-07,44;CL:0000540,7.28e-07,33;CL:0000047,7.28e-07,33;CL:0000031,7.28e-07,33;CL:0000404,7.28e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.94e-23!52;UBERON:0005068!1.94e-23!52;UBERON:0006241!1.94e-23!52;UBERON:0007135!1.94e-23!52;UBERON:0000955!6.87e-23!50;UBERON:0006238!6.87e-23!50;UBERON:0002346!8.40e-23!71;UBERON:0003075!8.40e-23!71;UBERON:0007284!8.40e-23!71;UBERON:0002616!2.75e-22!49;UBERON:0001017!4.58e-22!73;UBERON:0005743!4.58e-22!73;UBERON:0000073!7.44e-22!75;UBERON:0001016!7.44e-22!75;UBERON:0000153!1.99e-21!94;UBERON:0007811!2.72e-21!86;UBERON:0000033!4.49e-21!63;UBERON:0004121!3.54e-20!102;UBERON:0000924!3.54e-20!102;UBERON:0006601!3.54e-20!102;UBERON:0003080!1.18e-16!40;UBERON:0003056!2.15e-16!49;UBERON:0002780!5.38e-16!39;UBERON:0001890!5.38e-16!39;UBERON:0006240!5.38e-16!39;UBERON:0002020!2.00e-14!34;UBERON:0002791!3.67e-12!29;UBERON:0003528!3.67e-12!29;UBERON:0001893!3.67e-12!29;UBERON:0000956!1.56e-08!21;UBERON:0001869!1.56e-08!21;UBERON:0000203!1.56e-08!21;UBERON:0000475!3.18e-08!200;UBERON:0003076!1.80e-07!12;UBERON:0003057!1.80e-07!12;UBERON:0002619!2.94e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.04e-33,54;UBERON:0001049,1.21e-31,52;UBERON:0005068,1.21e-31,52;UBERON:0006241,1.21e-31,52;UBERON:0007135,1.21e-31,52;UBERON:0002346,1.65e-28,64;UBERON:0003075,1.65e-28,64;UBERON:0007284,1.65e-28,64;UBERON:0001017,2.25e-28,73;UBERON:0001016,3.66e-28,75;UBERON:0000955,1.16e-27,47;UBERON:0006238,1.16e-27,47;UBERON:0002616,8.73e-27,46;UBERON:0010371,1.33e-23,73;UBERON:0004121,1.58e-22,95;UBERON:0000924,1.58e-22,95;UBERON:0006601,1.58e-22,95;UBERON:0003080,1.50e-21,40;UBERON:0002780,1.39e-20,39;UBERON:0001890,1.39e-20,39;UBERON:0006240,1.39e-20,39;UBERON:0003056,1.11e-19,49;UBERON:0002020,3.73e-19,34;UBERON:0003528,9.14e-16,29;UBERON:0002791,9.14e-16,29;UBERON:0001893,9.14e-16,29;UBERON:0010314,1.09e-15,92;UBERON:0003076,1.53e-10,12;UBERON:0003057,1.53e-10,12;UBERON:0000956,2.20e-10,21;UBERON:0001869,2.20e-10,21;UBERON:0000203,2.20e-10,21;UBERON:0002619,1.82e-08,17;UBERON:0000025,3.60e-08,114;UBERON:0000119,8.02e-08,176;UBERON:0004111,1.10e-07,122;UBERON:0000483,1.20e-07,174;UBERON:0011216,2.41e-07,194;UBERON:0002021,4.86e-07,10;UBERON:0000411,4.86e-07,10;UBERON:0001950,4.86e-07,10;UBERON:0002420,8.72e-07,8;UBERON:0007245,8.72e-07,8;UBERON:0010009,8.72e-07,8;UBERON:0010011,8.72e-07,8;UBERON:0000454,8.72e-07,8 | |||
|phase1_expression=0.80074423552397,0.697950815278722,0,0,0,0.16787927191189,0.467225281191051,3.22808308603941,2.111830832275,2.57470978954193,0,0.159544317990673,1.71200729931206,2.36035086531293,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0,8.50432901510698,0.0992909512008853,0,0.47997726838022,0,0,0.86152399231815,0.430942465371778,0,0,0,0.635030673459631,3.07532393792285,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.506884656097573,0,1.56478268869608,1.74420125104357,2.63623419281366,3.69416808241138,0.839918529752175,0,0.335565212115473,5.80289713609076,4.7053131879945,0,0,1.03134418455488,3.23706337375356,0.528990979272033,3.80298842103708,0,1.77858959222228,0,0,0,0.599200221036809,3.07374644257244,1.34796496001021,1.21505344498522,1.47227472945967,2.85650984403804,1.98781686856452,0.367472397644862,1.24599112323707,0.919218786610021,9.91042928994498,11.4918604276669,11.2132769277058,1.97829431595291,2.10421580285542,1.04182674111352,12.5632349550621,5.06486349028512,7.94550888439413,2.35702868378934,1.85083185038834,5.03278503728312,0.227178579999552,1.28471652181535,0,0.860423876981386,0,0,0,0,1.40444420131752,0,0,0,0.985903938436763,0,0,0,0,0,0,1.37020655662872,2.07150306917737,0.890652834388949,0.693941307064543,0.913396434936424,0.691846491768175,0.904335843315735,1.52865319276416,0.376999773989026,0.741584903203122,0.289198713839823,0,0.161766849947409,0.220841518460394,0.484875253135222,0,14.3462590535658,13.823482649688,0.510914110417183,0,0,0,10.3355541189328,4.11750542536764,2.26177833803156,7.12679712788333,4.09144731728529,7.89594569326328,7.46309810111685,0.509196819251581,0.373220911830279,0.252722758433675,0,0.650602214813519,0.459804208866946,1.0803727788321,0.90422890701429,1.63287597963187,0.640568601424249,1.40552586839593,3.10444044886819,0.431135985865684,1.13463648100692,1.05570674498369,0.219195732427575,0.278047249225598,1.0447564995665,0.61734640922383,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0.540186184383045,0,0.393528463494808,0.308534225774757,0,0,0.233530684734339,0.329119699826961,0.164167464079095,0.162137619091711,0.292399974850665,0.439100230582101,0,5.88811855979556,2.46971069710283,0,0,0.639864751605702,0.232236671860439,1.15980715189884,0.605050573870028,0,0.570676878337677,0,0.494096864172033,0,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0.398282546508734,0.569003702859245,0.913988100877831,0,0.814605311381257,0.581857461502877,0.701358198903186,0.316182685621286,0.442830443938806,0.627994911365499,0.740382983530803,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,1.84753190166605,0,0.488894929326078,0.169745085775188,0.938760993154008,1.17254380209271,0.476087281772027,1.56106918286239,0.315270288212382,0.44292937929755,0.637819074629948,0.655453258862952,1.20879487306127,0.578596234326046,0,0,0,0,12.36239542906,16.4096361229084,0.655739781506702,0,0.315508219416257,0.390438744296638,1.72338718186239,0,0.445597348164788,0,0,0.876767573733936,0.395287777946524,4.4984984299053,0.425820255624806,1.42452482933804,0.162886959353576,0.659880491890142,0,0.242780636154981,0.604647113929502,0.188605079755898,0.590603785761546,0.614870295887855,0.775284879504663,1.09060118843252,0.712994756769443,0,1.05418608574999,1.03135543248187,6.80879211507576,1.08036656418786,0.905510786479282,1.07168517515796,1.41872186913819,1.78368817602071,2.46823530903181,4.26250928760439,0,0.21183207086382,1.98475558249466,1.15420377059036,0.161464426695906,0.784068024066026,0.477489376012546,0.820704498725306,0,18.7279555030615,0.341741761595705,1.03193433981611,0.185194527369712,0.188368457004691,0.136694227721025,0.228778173206523,0,0.139951452323658,0.276399947608848,0.954670618015114,0.949007980743406,0.203319467126849,0.324016022465404,0.418176592028937,0,0.269728692769641,0.165306911450672,0,0,0,25.9298751794728,1.19613236835183,0.330916980914195,1.94451188344048,0.774958940866387,0.506868376472335,0.469428954583016,1.0416350787516,1.36317147753424,15.9445519745164,15.8416503441826,2.21207784439725,0.608175645870493,0.410843828659309,0.25984164595559,0.895133478337407,1.98681354781265,1.20195449519969,0.738447635872886,1.21159739937777,1.143102099825,1.41156659191577,1.8516997340553,1.82802499116626,1.28564592399726,0.226730383615211,0.887943813496259,0.807424709485281,0.671538465456314,0.19318959403219,1.87682475451182,0.549454872801795,0.857473516316263,1.50471631210609,2.25900737046827,4.14292712856459,1.71868654031819,2.23409137046794,0.685082519770642,5.2877572817279,6.75022500231806,6.75481804836331,5.89085131679466,4.65984280576638,0.830298780673413,0,0.682934423016537,0.972426868273176,0.838452650511929,1.2869045591501,0.222246727801615,0.412070114477788,0.962757628775446,0.252697211763798,0.25347929989024,0.943131706930381,0.561849044819294,0.448176066834085,0.976402972245426,1.42888107384922,0.811190281613988,0.38581844092741,0.412085900803307,0.735994600671987,0,0.177475806159338,0.476872379894642,0.436039249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| |||
|short_description=p4@Ccdc92 | |||
}} |
Revision as of 07:52, 6 August 2015
Short description: | p4@Ccdc92 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ccdc92_5end |
Coexpression cluster: | MCL_coexpression_mm9:709 |
Association with transcript: | 72bp_to_NM_144819, uc008zqr.1_5end |
EntrezGene: | 215707 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.02e-11 | 23 |
neuroblast (sensu Vertebrata) | 2.02e-11 | 23 |
neural cell | 4.54e-08 | 43 |
ectodermal cell | 1.05e-07 | 44 |
neurectodermal cell | 1.05e-07 | 44 |
neuron | 7.28e-07 | 33 |
neuronal stem cell | 7.28e-07 | 33 |
neuroblast | 7.28e-07 | 33 |
electrically signaling cell | 7.28e-07 | 33 |