FFCP PHASE1:Mm9::chr8:3587784..3587802,+: Difference between revisions
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{{FFCP|EntrezGene=69697|HGNC=|MCL_coexpression_id=1|UniProt=Q80VC9,E9Q5B0|association_with_transcript=334bp_to_ENSMUST00000057028,ENSMUST00000111066,ENSMUST00000171962,NM_001163749,NM_027171,uc009krw.2,uc012fym.1_5end|description=CAGE_peak_4_at_Camsap3_5end|id=chr8:3587784..3587802,+|ontology_enrichment_celltype=CL:0000117!5.06e-09!23;CL:0000337!5.06e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.24e-11,23;CL:0000337,1.24e-11,23;CL:0000540,1.46e-07,33;CL:0000047,1.46e-07,33;CL:0000031,1.46e-07,33;CL:0000404,1.46e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!4.04e-17!102;UBERON:0000924!4.04e-17!102;UBERON:0006601!4.04e-17!102;UBERON:0000033!7.16e-17!63;UBERON:0002346!9.86e-16!71;UBERON:0003075!9.86e-16!71;UBERON:0007284!9.86e-16!71;UBERON:0001049!9.97e-16!52;UBERON:0005068!9.97e-16!52;UBERON:0006241!9.97e-16!52;UBERON:0007135!9.97e-16!52;UBERON:0001017!4.52e-15!73;UBERON:0005743!4.52e-15!73;UBERON:0000955!1.61e-14!50;UBERON:0006238!1.61e-14!50;UBERON:0000073!2.72e-14!75;UBERON:0001016!2.72e-14!75;UBERON:0002616!6.69e-14!49;UBERON:0002020!1.27e-13!34;UBERON:0003056!1.79e-13!49;UBERON:0003080!7.86e-12!40;UBERON:0002780!3.41e-11!39;UBERON:0001890!3.41e-11!39;UBERON:0006240!3.41e-11!39;UBERON:0002791!6.41e-11!29;UBERON:0003528!6.41e-11!29;UBERON:0001893!6.41e-11!29;UBERON:0002021!2.93e-07!10;UBERON:0000411!2.93e-07!10;UBERON:0001950!2.93e-07!10;UBERON:0000956!6.97e-07!21;UBERON:0001869!6.97e-07!21;UBERON:0000203!6.97e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.32e-23,54;UBERON:0001049,1.37e-21,52;UBERON:0005068,1.37e-21,52;UBERON:0006241,1.37e-21,52;UBERON:0007135,1.37e-21,52;UBERON:0001017,2.32e-20,73;UBERON:0004121,3.40e-20,95;UBERON:0000924,3.40e-20,95;UBERON:0006601,3.40e-20,95;UBERON:0002346,4.25e-20,64;UBERON:0003075,4.25e-20,64;UBERON:0007284,4.25e-20,64;UBERON:0001016,2.44e-19,75;UBERON:0002020,1.72e-18,34;UBERON:0010371,3.43e-18,73;UBERON:0000955,1.36e-17,47;UBERON:0006238,1.36e-17,47;UBERON:0002616,1.03e-16,46;UBERON:0003056,4.25e-15,49;UBERON:0003080,9.57e-15,40;UBERON:0003528,1.65e-14,29;UBERON:0002791,1.65e-14,29;UBERON:0001893,1.65e-14,29;UBERON:0002780,7.71e-14,39;UBERON:0001890,7.71e-14,39;UBERON:0006240,7.71e-14,39;UBERON:0002021,4.37e-10,10;UBERON:0000411,4.37e-10,10;UBERON:0001950,4.37e-10,10;UBERON:0010314,6.09e-10,92;UBERON:0000956,1.28e-08,21;UBERON:0001869,1.28e-08,21;UBERON:0000203,1.28e-08,21;UBERON:0002619,6.01e-08,17;UBERON:0003076,1.04e-07,12;UBERON:0003057,1.04e-07,12;UBERON:0002420,1.17e-07,8;UBERON:0007245,1.17e-07,8;UBERON:0010009,1.17e-07,8;UBERON:0010011,1.17e-07,8;UBERON:0000454,1.17e-07,8;UBERON:0007023,2.40e-07,51|phase1_expression=0.80074423552397,1.04692622291808,0,0.30246421130683,1.00179145989269,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0.274228867211478,0,1.44573593256819,0.0992909512008853,0,0.319984845586813,0,1.14846392823004,0.86152399231815,0.430942465371778,0.570070258369122,0.504060259519861,0.443461021310609,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,3.23706337375356,3.1739458756322,1.90149421051854,0,0,0,0,0.7104801149461,0.299600110518405,0.384218305321555,1.14058573539325,1.08004750665353,0.841299845405528,4.57041575046086,3.09215957332259,0.857435594504678,1.0543001812006,0,2.20231761998777,3.70293280447044,2.91852413186863,2.1101806036831,1.73826522844578,3.12548022334056,5.02529398202486,2.25105044012672,3.36156145108982,2.94628585473668,2.42031857358475,3.72798891650601,0.075726193333184,0.302286240427142,0.579728977403356,0,0,0,0,0,0.561777680527007,0,0,0,0.704217098883403,0,0,0,0.432982082022428,0.760079596425296,0,0.11418387971906,0,1.7813056687779,0.346970653532272,0.304465478312141,0.691846491768175,0.452167921657868,0.940709657085638,0.376999773989026,2.22475470960936,1.44599356919912,0,0,0,0,0,2.34224637609238,4.81727425670947,1.27728527604296,0.239630249011841,0,0,8.38827580667007,8.23501085073528,4.14659361972453,6.08385120672968,8.69432554923124,3.53239675751252,4.70499662896497,0.712875546952214,0.373220911830279,2.0217820674694,2.31486041475121,0.780722657776222,0.689706313300419,1.62055916824814,0.452114453507145,1.29269348387523,0.896796041993948,1.3118241438362,3.62184719034622,0.862271971731369,0.189106080167819,1.58356011747554,0.219195732427575,0.834141747676794,0.348252166522167,0,0.59710280045548,0,0,0,0,0.234526059981096,0.540186184383045,0.473489471170421,0.983821158737019,0.154267112887378,0,0.268273401399619,0.467061369468678,0.16455984991348,0.164167464079095,0.162137619091711,0,0,0.134206418760372,5.88811855979556,2.6755199218614,2.97376904685418,0.264450566663544,0.426576501070468,0.464473343720877,0,0.201683524623343,0.22237804384487,0.570676878337677,0.474529061544512,0.329397909448022,1.25667604400135,1.39269530428806,1.16978452271472,1.79763881730844,0,0.796565093017469,1.51734320762465,0.913988100877831,2.25415471346161,0.610953983535943,0.775809948670503,1.82353131714828,1.13825766823663,0.295220295959204,0.627994911365499,0.863780147452604,0,0,0,0.224862112384854,0,0.241177159752417,0.763877555344259,0,0.648540907100142,0,0,0.372140947668503,0.624075346229121,0.505157755894224,0.179397413521912,1.4473305640901,0.184753190166605,0,0.814824882210129,0.678980343100753,0.234690248288502,0.167506257441816,0.952174563544055,1.17080188714679,0,0.44292937929755,0.637819074629948,0.491589944147214,0.172684981865896,0.144649058581512,0,0,0,1.37968373152366,4.81651769963376,4.92289083687253,0,0,0,0.390438744296638,0.861693590931196,0,0.668396022247182,0,0.809621403349789,1.16902343164525,1.18586333383957,4.81981974632711,0.567760340833074,0.712262414669021,1.30309567482861,1.31976098378028,0,0.728341908464944,1.51161778482376,0.377210159511796,1.18120757152309,1.22974059177571,1.03371317267288,0.727067458955011,0.356497378384721,0.948110273807448,0,3.09406629744561,2.04263763452273,0.540183282093931,0.646793418913773,1.07168517515796,0.709360934569094,1.24858172321449,0.493647061806363,0,0,1.90648863777438,1.98475558249466,0.8244312647074,0.161464426695906,1.02531972377865,1.55184047204077,0.820704498725306,1.1659233465194,6.30446026835733,0,0,0,0,0,0,0.679913719975421,0.279902904647316,0.138199973804424,2.86401185404534,0.790839983952838,0.203319467126849,0.216010681643603,0.627264888043406,0.655087691238533,1.21377911746339,1.1571483801547,0.785267825952089,0.777689839750757,2.4853572523477,0.56369293868419,0.747582730219894,0.992750942742586,1.94451188344048,3.61647505737647,1.01373675294467,1.99507305697782,1.43224823328345,1.04859344425711,1.20792060413003,0.576060012515731,0,0.405450430580328,0.102710957164827,0.129920822977795,0.358053391334963,0,0.480781798079875,0.147689527174577,0,0,0,0,0.0962118416403295,0.116876902181569,0.906921534460845,0,0.0897138566094757,0,0.772758376128762,0.563047426353546,0.915758121336325,1.71494703263253,2.00628841614145,5.64751842617067,6.44455331110048,3.43737308063638,2.749650917499,4.11049511862385,4.5323633843382,2.70009000092722,3.60256962579376,4.07828168085784,4.14208249401456,0.830298780673413,1.19707462020309,0.682934423016537,0.972426868273176,1.88651846365184,0.735374033800057,1.11123363900808,1.44224540067226,0.962757628775446,0.758091635291392,1.01391719956096,1.13175804831646,0.468207537349412,0.512201219238954,0.574354689556133,0.476293691283074,0.695305955669133,0.77163688185482,0.412085900803307,0.588795680537589,0.685738504770831,1.06485483695602,0.953744759789284,1.45346416632329,0.470546902076653,0.592302255241736,0.914639864363863,1.57841826862706,0.135804113845862,2.24456908663095,0.474540072496697,0.886540341380071,0.409231043169689,0.929621047115796,0.578719832943424,1.24905288968973,1.63752125911786,0.214871054048298,1.53030665655075,0.661774257358546,0.463735671240843|short_description=p4@Camsap3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:69697 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q80VC9,uniprot:E9Q5B0 | |||
|association_with_transcript=334bp_to_ENSMUST00000057028,ENSMUST00000111066,ENSMUST00000171962,NM_001163749,NM_027171,uc009krw.2,uc012fym.1_5end | |||
|cluster_id=chr8:3587784..3587802,+ | |||
|description=CAGE_peak_4_at_Camsap3_5end | |||
|id=chr8:3587784..3587802,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.06e-09!23;CL:0000337!5.06e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.24e-11,23;CL:0000337,1.24e-11,23;CL:0000540,1.46e-07,33;CL:0000047,1.46e-07,33;CL:0000031,1.46e-07,33;CL:0000404,1.46e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.04e-17!102;UBERON:0000924!4.04e-17!102;UBERON:0006601!4.04e-17!102;UBERON:0000033!7.16e-17!63;UBERON:0002346!9.86e-16!71;UBERON:0003075!9.86e-16!71;UBERON:0007284!9.86e-16!71;UBERON:0001049!9.97e-16!52;UBERON:0005068!9.97e-16!52;UBERON:0006241!9.97e-16!52;UBERON:0007135!9.97e-16!52;UBERON:0001017!4.52e-15!73;UBERON:0005743!4.52e-15!73;UBERON:0000955!1.61e-14!50;UBERON:0006238!1.61e-14!50;UBERON:0000073!2.72e-14!75;UBERON:0001016!2.72e-14!75;UBERON:0002616!6.69e-14!49;UBERON:0002020!1.27e-13!34;UBERON:0003056!1.79e-13!49;UBERON:0003080!7.86e-12!40;UBERON:0002780!3.41e-11!39;UBERON:0001890!3.41e-11!39;UBERON:0006240!3.41e-11!39;UBERON:0002791!6.41e-11!29;UBERON:0003528!6.41e-11!29;UBERON:0001893!6.41e-11!29;UBERON:0002021!2.93e-07!10;UBERON:0000411!2.93e-07!10;UBERON:0001950!2.93e-07!10;UBERON:0000956!6.97e-07!21;UBERON:0001869!6.97e-07!21;UBERON:0000203!6.97e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.32e-23,54;UBERON:0001049,1.37e-21,52;UBERON:0005068,1.37e-21,52;UBERON:0006241,1.37e-21,52;UBERON:0007135,1.37e-21,52;UBERON:0001017,2.32e-20,73;UBERON:0004121,3.40e-20,95;UBERON:0000924,3.40e-20,95;UBERON:0006601,3.40e-20,95;UBERON:0002346,4.25e-20,64;UBERON:0003075,4.25e-20,64;UBERON:0007284,4.25e-20,64;UBERON:0001016,2.44e-19,75;UBERON:0002020,1.72e-18,34;UBERON:0010371,3.43e-18,73;UBERON:0000955,1.36e-17,47;UBERON:0006238,1.36e-17,47;UBERON:0002616,1.03e-16,46;UBERON:0003056,4.25e-15,49;UBERON:0003080,9.57e-15,40;UBERON:0003528,1.65e-14,29;UBERON:0002791,1.65e-14,29;UBERON:0001893,1.65e-14,29;UBERON:0002780,7.71e-14,39;UBERON:0001890,7.71e-14,39;UBERON:0006240,7.71e-14,39;UBERON:0002021,4.37e-10,10;UBERON:0000411,4.37e-10,10;UBERON:0001950,4.37e-10,10;UBERON:0010314,6.09e-10,92;UBERON:0000956,1.28e-08,21;UBERON:0001869,1.28e-08,21;UBERON:0000203,1.28e-08,21;UBERON:0002619,6.01e-08,17;UBERON:0003076,1.04e-07,12;UBERON:0003057,1.04e-07,12;UBERON:0002420,1.17e-07,8;UBERON:0007245,1.17e-07,8;UBERON:0010009,1.17e-07,8;UBERON:0010011,1.17e-07,8;UBERON:0000454,1.17e-07,8;UBERON:0007023,2.40e-07,51 | |||
|phase1_expression=0.80074423552397,1.04692622291808,0,0.30246421130683,1.00179145989269,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0.274228867211478,0,1.44573593256819,0.0992909512008853,0,0.319984845586813,0,1.14846392823004,0.86152399231815,0.430942465371778,0.570070258369122,0.504060259519861,0.443461021310609,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,3.23706337375356,3.1739458756322,1.90149421051854,0,0,0,0,0.7104801149461,0.299600110518405,0.384218305321555,1.14058573539325,1.08004750665353,0.841299845405528,4.57041575046086,3.09215957332259,0.857435594504678,1.0543001812006,0,2.20231761998777,3.70293280447044,2.91852413186863,2.1101806036831,1.73826522844578,3.12548022334056,5.02529398202486,2.25105044012672,3.36156145108982,2.94628585473668,2.42031857358475,3.72798891650601,0.075726193333184,0.302286240427142,0.579728977403356,0,0,0,0,0,0.561777680527007,0,0,0,0.704217098883403,0,0,0,0.432982082022428,0.760079596425296,0,0.11418387971906,0,1.7813056687779,0.346970653532272,0.304465478312141,0.691846491768175,0.452167921657868,0.940709657085638,0.376999773989026,2.22475470960936,1.44599356919912,0,0,0,0,0,2.34224637609238,4.81727425670947,1.27728527604296,0.239630249011841,0,0,8.38827580667007,8.23501085073528,4.14659361972453,6.08385120672968,8.69432554923124,3.53239675751252,4.70499662896497,0.712875546952214,0.373220911830279,2.0217820674694,2.31486041475121,0.780722657776222,0.689706313300419,1.62055916824814,0.452114453507145,1.29269348387523,0.896796041993948,1.3118241438362,3.62184719034622,0.862271971731369,0.189106080167819,1.58356011747554,0.219195732427575,0.834141747676794,0.348252166522167,0,0.59710280045548,0,0,0,0,0.234526059981096,0.540186184383045,0.473489471170421,0.983821158737019,0.154267112887378,0,0.268273401399619,0.467061369468678,0.16455984991348,0.164167464079095,0.162137619091711,0,0,0.134206418760372,5.88811855979556,2.6755199218614,2.97376904685418,0.264450566663544,0.426576501070468,0.464473343720877,0,0.201683524623343,0.22237804384487,0.570676878337677,0.474529061544512,0.329397909448022,1.25667604400135,1.39269530428806,1.16978452271472,1.79763881730844,0,0.796565093017469,1.51734320762465,0.913988100877831,2.25415471346161,0.610953983535943,0.775809948670503,1.82353131714828,1.13825766823663,0.295220295959204,0.627994911365499,0.863780147452604,0,0,0,0.224862112384854,0,0.241177159752417,0.763877555344259,0,0.648540907100142,0,0,0.372140947668503,0.624075346229121,0.505157755894224,0.179397413521912,1.4473305640901,0.184753190166605,0,0.814824882210129,0.678980343100753,0.234690248288502,0.167506257441816,0.952174563544055,1.17080188714679,0,0.44292937929755,0.637819074629948,0.491589944147214,0.172684981865896,0.144649058581512,0,0,0,1.37968373152366,4.81651769963376,4.92289083687253,0,0,0,0.390438744296638,0.861693590931196,0,0.668396022247182,0,0.809621403349789,1.16902343164525,1.18586333383957,4.81981974632711,0.567760340833074,0.712262414669021,1.30309567482861,1.31976098378028,0,0.728341908464944,1.51161778482376,0.377210159511796,1.18120757152309,1.22974059177571,1.03371317267288,0.727067458955011,0.356497378384721,0.948110273807448,0,3.09406629744561,2.04263763452273,0.540183282093931,0.646793418913773,1.07168517515796,0.709360934569094,1.24858172321449,0.493647061806363,0,0,1.90648863777438,1.98475558249466,0.8244312647074,0.161464426695906,1.02531972377865,1.55184047204077,0.820704498725306,1.1659233465194,6.30446026835733,0,0,0,0,0,0,0.679913719975421,0.279902904647316,0.138199973804424,2.86401185404534,0.790839983952838,0.203319467126849,0.216010681643603,0.627264888043406,0.655087691238533,1.21377911746339,1.1571483801547,0.785267825952089,0.777689839750757,2.4853572523477,0.56369293868419,0.747582730219894,0.992750942742586,1.94451188344048,3.61647505737647,1.01373675294467,1.99507305697782,1.43224823328345,1.04859344425711,1.20792060413003,0.576060012515731,0,0.405450430580328,0.102710957164827,0.129920822977795,0.358053391334963,0,0.480781798079875,0.147689527174577,0,0,0,0,0.0962118416403295,0.116876902181569,0.906921534460845,0,0.0897138566094757,0,0.772758376128762,0.563047426353546,0.915758121336325,1.71494703263253,2.00628841614145,5.64751842617067,6.44455331110048,3.43737308063638,2.749650917499,4.11049511862385,4.5323633843382,2.70009000092722,3.60256962579376,4.07828168085784,4.14208249401456,0.830298780673413,1.19707462020309,0.682934423016537,0.972426868273176,1.88651846365184,0.735374033800057,1.11123363900808,1.44224540067226,0.962757628775446,0.758091635291392,1.01391719956096,1.13175804831646,0.468207537349412,0.512201219238954,0.574354689556133,0.476293691283074,0.695305955669133,0.77163688185482,0.412085900803307,0.588795680537589,0.685738504770831,1.06485483695602,0.953744759789284,1.45346416632329,0.470546902076653,0.592302255241736,0.914639864363863,1.57841826862706,0.135804113845862,2.24456908663095,0.47454007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| |||
|short_description=p4@Camsap3 | |||
}} |
Revision as of 09:06, 6 August 2015
Short description: | p4@Camsap3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Camsap3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 334bp_to_ENSMUST00000057028, ENSMUST00000111066, ENSMUST00000171962, NM_001163749, NM_027171, uc009krw.2, uc012fym.1_5end |
EntrezGene: | 69697 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.24e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.24e-11 | 23 |
neuron | 1.46e-07 | 33 |
neuronal stem cell | 1.46e-07 | 33 |
neuroblast | 1.46e-07 | 33 |
electrically signaling cell | 1.46e-07 | 33 |