FFCP PHASE1:Hg19::chr2:233792837..233792888,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25791 | |EntrezGene=25791 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7807 | |HGNC=7807 | ||
|TSSclassifier=strong | |||
|UniProt=E9PC42,Q8N5V2 | |UniProt=E9PC42,Q8N5V2 | ||
|association_with_transcript=0bp_to_ENST00000373552,ENST00000409079,NM_001114090,uc002vtt.2,uc010fyg.1_5end | |association_with_transcript=0bp_to_ENST00000373552,ENST00000409079,NM_001114090,uc002vtt.2,uc010fyg.1_5end | ||
|cluster_id=chr2:233792837..233792888,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_NGEF_5end | |description=CAGE_peak_1_at_NGEF_5end | ||
|id=chr2:233792837..233792888,- | |id=chr2:233792837..233792888,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.00e-09;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.66e-26!82;UBERON:0000073!1.66e-25!94;UBERON:0001016!1.66e-25!94;UBERON:0005743!7.70e-25!86;UBERON:0001049!1.87e-24!57;UBERON:0005068!1.87e-24!57;UBERON:0006241!1.87e-24!57;UBERON:0007135!1.87e-24!57;UBERON:0000955!5.26e-23!69;UBERON:0006238!5.26e-23!69;UBERON:0003075!3.05e-22!86;UBERON:0007284!3.05e-22!86;UBERON:0002346!1.95e-21!90;UBERON:0002616!7.21e-20!59;UBERON:0002780!8.29e-20!41;UBERON:0001890!8.29e-20!41;UBERON:0006240!8.29e-20!41;UBERON:0001893!1.76e-19!34;UBERON:0002020!2.65e-19!34;UBERON:0003528!2.65e-19!34;UBERON:0003080!8.11e-19!42;UBERON:0002791!9.01e-19!33;UBERON:0001869!9.19e-19!32;UBERON:0004121!1.22e-18!169;UBERON:0000924!2.42e-18!173;UBERON:0006601!2.42e-18!173;UBERON:0000033!1.20e-16!123;UBERON:0003056!1.25e-15!61;UBERON:0000153!1.67e-15!129;UBERON:0007811!1.67e-15!129;UBERON:0002619!1.95e-15!22;UBERON:0007023!1.23e-14!115;UBERON:0001950!3.03e-14!20;UBERON:0000956!8.03e-14!25;UBERON:0000203!8.03e-14!25;UBERON:0000064!4.93e-12!219;UBERON:0000025!2.23e-11!194;UBERON:0000922!1.08e-10!612;UBERON:0000475!2.33e-10!365;UBERON:0000481!3.25e-10!347;UBERON:0000477!8.21e-10!286;UBERON:0000468!8.22e-10!659;UBERON:0002050!1.81e-09!605;UBERON:0005423!1.81e-09!605;UBERON:0000923!3.51e-09!604;UBERON:0005291!3.51e-09!604;UBERON:0006598!3.51e-09!604;UBERON:0002532!3.51e-09!604;UBERON:0000119!4.08e-09!312;UBERON:0004111!4.94e-09!241;UBERON:0000483!5.60e-09!309;UBERON:0000467!2.66e-08!625;UBERON:0000480!3.84e-08!626;UBERON:0000062!4.07e-08!511;UBERON:0002420!2.57e-07!9;UBERON:0007245!2.57e-07!9;UBERON:0010009!2.57e-07!9;UBERON:0010011!2.57e-07!9;UBERON:0000454!2.57e-07!9;UBERON:0002308!5.26e-07!9;UBERON:0000125!5.26e-07!9;UBERON:0003076!7.51e-07!15;UBERON:0003057!7.51e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.74e-20;34!UBERON:0001869;3.72e-20;32!UBERON:0003528;7.00e-20;34!UBERON:0002020;7.00e-20;34!UBERON:0002619;7.95e-20;22!UBERON:0002791;1.12e-19;32!UBERON:0001950;2.70e-18;20!UBERON:0002780;9.51e-17;41!UBERON:0001890;9.51e-17;41!UBERON:0000956;2.52e-16;25!UBERON:0000203;2.52e-16;25!UBERON:0000073;3.25e-16;53!UBERON:0002616;3.25e-16;53!UBERON:0001017;6.77e-13;75!UBERON:0000955;2.70e-12;68!UBERON:0001016;3.15e-12;83!UBERON:0002420;4.78e-09;9!UBERON:0007245;4.78e-09;9!UBERON:0010009;4.78e-09;9!UBERON:0010011;4.78e-09;9!UBERON:0000454;4.78e-09;9!UBERON:0000125;1.21e-08;9!UBERON:0002308;1.21e-08;9!UBERON:0004732;1.26e-07;13!UBERON:0009663;2.52e-07;7!UBERON:0000200;3.94e-07;6!UBERON:0004733;6.44e-07;12!UBERON:0002028;6.44e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.39e-30,89;UBERON:0001049,1.87e-30,56;UBERON:0005068,1.87e-30,56;UBERON:0006241,1.87e-30,56;UBERON:0007135,1.87e-30,56;UBERON:0001017,4.50e-30,81;UBERON:0000073,1.53e-28,53;UBERON:0002616,1.53e-28,53;UBERON:0003075,3.20e-27,82;UBERON:0007284,3.20e-27,82;UBERON:0000955,6.77e-27,68;UBERON:0006238,6.77e-27,68;UBERON:0002346,1.28e-26,86;UBERON:0001893,1.45e-23,34;UBERON:0003528,2.42e-23,34;UBERON:0002020,2.42e-23,34;UBERON:0010314,5.77e-23,132;UBERON:0002780,6.78e-23,41;UBERON:0001890,6.78e-23,41;UBERON:0003080,6.78e-23,41;UBERON:0006240,6.78e-23,41;UBERON:0001869,1.25e-22,32;UBERON:0002791,5.74e-22,32;UBERON:0004121,9.74e-21,171;UBERON:0000924,9.74e-21,171;UBERON:0006601,9.74e-21,171;UBERON:0003056,2.92e-20,61;UBERON:0002619,8.23e-20,22;UBERON:0010371,1.78e-18,104;UBERON:0001950,2.84e-18,20;UBERON:0000956,2.58e-16,25;UBERON:0000203,2.58e-16,25;UBERON:0007023,1.77e-14,114;UBERON:0011216,6.77e-13,223;UBERON:0000025,1.41e-12,192;UBERON:0004111,4.31e-09,240;UBERON:0002420,5.52e-09,9;UBERON:0007245,5.52e-09,9;UBERON:0010009,5.52e-09,9;UBERON:0010011,5.52e-09,9;UBERON:0000454,5.52e-09,9;UBERON:0003076,1.15e-08,15;UBERON:0003057,1.15e-08,15;UBERON:0000125,1.38e-08,9;UBERON:0002308,1.38e-08,9;UBERON:0004732,1.37e-07,13;UBERON:0000119,1.51e-07,309;UBERON:0000483,2.48e-07,306;UBERON:0009663,2.90e-07,7;UBERON:0000200,4.00e-07,6;UBERON:0004733,6.95e-07,12;UBERON:0002028,6.95e-07,12;UBERON:0007277,6.95e-07,12;UBERON:0000922,9.46e-07,592 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,1.0007329835313,0,0.872338524100369,0,0,0,0.982935746006035,0,3.71350332621293,2.11013582582763,0.123766352960047,0,0,0,0,0,11.4502584011413,5.10001728110633,4.07491137921514,0.572471974262113,0.684372125364421,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61439152384566,6.01605492763067,8.98048417557107,15.1104329939709,64.7224377502506,3.30871860074237,6.20842312895179,2.45937399940753,26.1958150995425,1.09288586487763,0,0,0,0,0,0,0,0,3.4409383804245,0.694281003215189,4.52246353539208,4.61449379830897,0,0.626984899610432,0,0,0,0.805658634218294,0,0,0,0.81014194788176,0.17859945656816,0,0,0,0,1.28241220751285,0,0,0,0,1.77282716330412,0.132409180813219,10.8997915884549,15.9600771989261,1.12135520028461,2.1349799145941,1.72667283892012,1.24484414159907,0.269421344139376,1.30769522490767,0.151357427644931,0,0.70296429550139,5.93104145977609,1.1409436430889,4.93180645820944,0.822041490506354,0,0,0.204154171254893,1.47401180774122,0.206651562351531,0,0,3.64064544775211,0,0.841680569770331,2.00189631795143,0,0,0,1.35214253015937,0,0,0,0,1.80054657650641,0.92747276314595,0.515281080091258,0.744467425326359,2.19409231913646,0.194874010322397,0,0.0920498986422993,0.323292113637624,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,2.31750041646231,0.927708378250397,1.04574548582567,1.65857688024593,0.252320850875628,0.36497735907583,0,0.643240938192885,1.38134921352481,0,0,3.66751080123516,3.20310911148393,4.33819853790268,3.19852520923942,3.4860711054785,2.84724742933316,1.48314438976181,2.35465758150415,4.23221872641029,0,1.40241773803446,0.4115740113314,0,0,0,1.18157981336281,0,0,2.23038153388083,0,0,0,0.185176890317059,0,0,5.77325368101093,2.43453850447661,0.234817388471643,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,1.53353071666084,0,0,0.207328115540772,0.144119953416961,0.50496973370552,0,0,0,0,0.102827492703324,0,0,2.13049060256185,0,2.0534720029866,0,0,0,0,0,0.257207374262142,1.41849132023278,0,0,0,0.823240336780769,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0,0,4.27910715122155,0.434343920002738,0.205476322550383,0.537182889719687,0,0.197030760201927,0,0,2.54094624222463,2.60279707715243,6.18631050222156,0.670065061337395,2.55175500661265,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,1.7571212248907,1.80567659836631,0,3.10419213877515,0,3.13427586520895,0.173767228936166,0.195801157462741,0.343143423810856,0,0,0,2.42502057157008,0,1.5119514666484,1.48864684691266,1.2276957863045,2.24528075546459,0.896974044789907,1.02341449813341,0,2.96836132889982,0.154209693802656,0.177561725313127,2.87445046048332,8.30807086693794,1.74315567689939,0,0,0.736647911487171,0.229628896329213,0.910455840033585,0.131124414959424,2.25599806453706,0.616122696835318,0.784349769176855,0,0.633309773357254,0,0.170093705276516,0,0,0,0,1.01950509218015,1.66215201785745,0,0,0,0,0,0.325378394664303,0.515205058238611,15.8415174135734,13.3665389871353,0,0,0,2.90012154876366,0.770243085573222,0.307007349452259,0.137836572484531,0.107420244868274,0.145016693914229,0.511359764496605,2.58192903375538,0,0.192190067365106,0.127612712494584,0.4046311234222,0,0,0,4.92853728281742,3.72614221221915,0,2.7798632865588,0,0.372158369359667,0,0,1.02359116524534,0,3.18203247925937,4.70969184119538,0,0,0.117812402345686,2.02182481573316,1.58510321173008,0.421258456238981,0,3.89941583410055,1.05650146756755,0,0.141405431953713,39.552840817085,3.85955740482287,1.32687795048244,0,0.578775534266688,0.655894752046633,0.608731130888112,3.0982349809975,4.7888252430481,0,0,1.07001315444375,8.15950447362375,14.7775344708365,8.23237232399755,0,0,0.0962221127255121,0.670302275535787,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851692475380653,0,0,0,0.166849141711909,0,0,1.23087398947712,0.270455678475983,0,0,0.18714054040822,0.586032717087576,0.121360521749513,0,2.55722532125772,49.4201083407018,2.07875276582847,50.3743551442741,42.7483488539508,87.9183852565705,4.78627431598495,0,0.844501632511974,1.59398390600856,0,0.251932747854276,0.613612095012929,0,0,0.988551862620595,0.358042349351218,0,0.493217028184668,0,0,144.430579168188,154.273347243159,81.8416571804896,0.520855522170466,0,0,0.796554137998498,9.15313141053959,1.18193840883968,0,0,1.38899995946634,147.033070045097,216.350010893982,0,2.43274371848694,3.84211904639612,139.74849798708,0.10893846351899,6.13464474825854,2.92410982314429,0.113942055847001,1.61394733071642,0,0.108647371922008,8.29403015302991,0,0,0,0,0,0,0,0,0.75901493089674,0,2.95397290339238,0.326465616318295,0,0.216388639742091,0,0.0884575645033392,0.611030144933625,0,0,0,9.166554085372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| ||
|short_description=p1@NGEF | |short_description=p1@NGEF | ||
}} | }} |
Latest revision as of 22:27, 15 September 2015
Short description: | p1@NGEF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NGEF_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000373552, ENST00000409079, NM_001114090, uc002vtt.2, uc010fyg.1_5end |
EntrezGene: | NGEF |
HGNC: | 7807 |
UniProt: | E9PC42Q8N5V2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data