FFCP PHASE1:Hg19::chr16:28303782..28303797,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=388228 | |EntrezGene=388228 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17699 | |HGNC=17699 | ||
|TSSclassifier=strong | |||
|UniProt=Q52WX2 | |UniProt=Q52WX2 | ||
|association_with_transcript=-42bp_to_ENST00000341901,NM_001024401,uc002dpd.2_5end | |association_with_transcript=-42bp_to_ENST00000341901,NM_001024401,uc002dpd.2_5end | ||
|cluster_id=chr16:28303782..28303797,+ | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_3_at_SBK1_5end | |description=CAGE_peak_3_at_SBK1_5end | ||
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|ontology_enrichment_celltype=CL:0000047!1.65e-09!8;CL:0002319!4.34e-09!25;CL:0000540!1.45e-07!6;CL:0000031!1.45e-07!6;CL:0000404!1.45e-07!6 | |ontology_enrichment_celltype=CL:0000047!1.65e-09!8;CL:0002319!4.34e-09!25;CL:0000540!1.45e-07!6;CL:0000031!1.45e-07!6;CL:0000404!1.45e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000540;3.48e-15;6!CL:0000404;3.48e-15;6!CL:0002322;7.54e-12;5!CL:0002319;1.61e-07;25!CL:0002321;5.07e-07;15 | |ontology_enrichment_celltype_v019=CL:0000540;3.48e-15;6!CL:0000404;3.48e-15;6!CL:0002322;7.54e-12;5!CL:0002319;1.61e-07;25!CL:0002321;5.07e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.50e-20,8;CL:0000540,2.22e-15,6;CL:0000031,2.22e-15,6;CL:0000404,2.22e-15,6;CL:0002322,7.70e-12,5;CL:0002319,1.39e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000031;3.48e-15;6!UBERON:0006601;1.59e-11;82!UBERON:0006215;1.63e-08;3 | |ontology_enrichment_development_v019=CL:0000031;3.48e-15;6!UBERON:0006601;1.59e-11;82!UBERON:0006215;1.63e-08;3 | ||
|ontology_enrichment_disease=DOID:3095!6.16e-07!22;DOID:2994!6.16e-07!22 | |ontology_enrichment_disease=DOID:3095!6.16e-07!22;DOID:2994!6.16e-07!22 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.70e-48!86;UBERON:0000073!7.56e-48!94;UBERON:0001016!7.56e-48!94;UBERON:0001017!2.17e-47!82;UBERON:0001049!3.38e-40!57;UBERON:0005068!3.38e-40!57;UBERON:0006241!3.38e-40!57;UBERON:0007135!3.38e-40!57;UBERON:0000955!1.78e-36!69;UBERON:0006238!1.78e-36!69;UBERON:0002346!1.29e-33!90;UBERON:0002616!2.98e-33!59;UBERON:0003075!4.24e-32!86;UBERON:0007284!4.24e-32!86;UBERON:0002780!1.11e-30!41;UBERON:0001890!1.11e-30!41;UBERON:0006240!1.11e-30!41;UBERON:0003080!1.37e-29!42;UBERON:0002020!2.44e-29!34;UBERON:0003528!2.44e-29!34;UBERON:0001893!4.22e-29!34;UBERON:0002791!4.58e-28!33;UBERON:0001869!5.95e-28!32;UBERON:0000924!4.31e-27!173;UBERON:0006601!4.31e-27!173;UBERON:0004121!1.15e-25!169;UBERON:0003056!3.94e-25!61;UBERON:0000153!2.40e-24!129;UBERON:0007811!2.40e-24!129;UBERON:0000956!7.10e-24!25;UBERON:0000203!7.10e-24!25;UBERON:0000033!6.08e-23!123;UBERON:0002619!2.79e-22!22;UBERON:0001950!1.27e-20!20;UBERON:0007023!1.31e-14!115;UBERON:0003076!1.66e-11!15;UBERON:0003057!1.66e-11!15;UBERON:0004733!1.24e-09!12;UBERON:0002028!1.24e-09!12;UBERON:0007277!1.24e-09!12;UBERON:0000025!4.41e-09!194;UBERON:0004732!1.29e-08!13;UBERON:0000064!2.38e-08!219;UBERON:0000200!1.44e-07!6;UBERON:0002680!1.72e-07!9;UBERON:0001895!1.72e-07!9;UBERON:0010092!1.72e-07!9;UBERON:0001871!2.39e-07!7;UBERON:0004111!2.72e-07!241;UBERON:0000483!2.89e-07!309;UBERON:0002420!3.69e-07!9;UBERON:0007245!3.69e-07!9;UBERON:0010009!3.69e-07!9;UBERON:0010011!3.69e-07!9;UBERON:0000454!3.69e-07!9;UBERON:0002308!5.24e-07!9;UBERON:0000125!5.24e-07!9;UBERON:0000119!5.77e-07!312;UBERON:0002021!7.99e-07!5;UBERON:0001872!8.54e-07!5 | |ontology_enrichment_uberon=UBERON:0005743!1.70e-48!86;UBERON:0000073!7.56e-48!94;UBERON:0001016!7.56e-48!94;UBERON:0001017!2.17e-47!82;UBERON:0001049!3.38e-40!57;UBERON:0005068!3.38e-40!57;UBERON:0006241!3.38e-40!57;UBERON:0007135!3.38e-40!57;UBERON:0000955!1.78e-36!69;UBERON:0006238!1.78e-36!69;UBERON:0002346!1.29e-33!90;UBERON:0002616!2.98e-33!59;UBERON:0003075!4.24e-32!86;UBERON:0007284!4.24e-32!86;UBERON:0002780!1.11e-30!41;UBERON:0001890!1.11e-30!41;UBERON:0006240!1.11e-30!41;UBERON:0003080!1.37e-29!42;UBERON:0002020!2.44e-29!34;UBERON:0003528!2.44e-29!34;UBERON:0001893!4.22e-29!34;UBERON:0002791!4.58e-28!33;UBERON:0001869!5.95e-28!32;UBERON:0000924!4.31e-27!173;UBERON:0006601!4.31e-27!173;UBERON:0004121!1.15e-25!169;UBERON:0003056!3.94e-25!61;UBERON:0000153!2.40e-24!129;UBERON:0007811!2.40e-24!129;UBERON:0000956!7.10e-24!25;UBERON:0000203!7.10e-24!25;UBERON:0000033!6.08e-23!123;UBERON:0002619!2.79e-22!22;UBERON:0001950!1.27e-20!20;UBERON:0007023!1.31e-14!115;UBERON:0003076!1.66e-11!15;UBERON:0003057!1.66e-11!15;UBERON:0004733!1.24e-09!12;UBERON:0002028!1.24e-09!12;UBERON:0007277!1.24e-09!12;UBERON:0000025!4.41e-09!194;UBERON:0004732!1.29e-08!13;UBERON:0000064!2.38e-08!219;UBERON:0000200!1.44e-07!6;UBERON:0002680!1.72e-07!9;UBERON:0001895!1.72e-07!9;UBERON:0010092!1.72e-07!9;UBERON:0001871!2.39e-07!7;UBERON:0004111!2.72e-07!241;UBERON:0000483!2.89e-07!309;UBERON:0002420!3.69e-07!9;UBERON:0007245!3.69e-07!9;UBERON:0010009!3.69e-07!9;UBERON:0010011!3.69e-07!9;UBERON:0000454!3.69e-07!9;UBERON:0002308!5.24e-07!9;UBERON:0000125!5.24e-07!9;UBERON:0000119!5.77e-07!312;UBERON:0002021!7.99e-07!5;UBERON:0001872!8.54e-07!5 | ||
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| ||
|short_description=p3@SBK1 | |short_description=p3@SBK1 | ||
}} | }} |
Latest revision as of 23:42, 15 September 2015
Short description: | p3@SBK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SBK1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -42bp_to_ENST00000341901, NM_001024401, uc002dpd.2_5end |
EntrezGene: | SBK1 |
HGNC: | 17699 |
UniProt: | Q52WX2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.50e-20 | 8 |
neuron | 2.22e-15 | 6 |
neuroblast | 2.22e-15 | 6 |
electrically signaling cell | 2.22e-15 | 6 |
embryonic stem cell | 7.70e-12 | 5 |
neural cell | 1.39e-07 | 25 |