FFCP PHASE1:Hg19::chr10:104178857..104178919,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:104178857..104178919,- to FFCP PHASE1:Hg19::chr10:104178857..104178919,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5662 | |EntrezGene=5662 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9507 | |HGNC=9507 | ||
|TSSclassifier=strong | |||
|UniProt=A5PKW4 | |UniProt=A5PKW4 | ||
|association_with_transcript=0bp_to_ENST00000020673,NM_002779,uc001kvg.1_5end | |||
|cluster_id=chr10:104178857..104178919,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_4_at_PSD_5end | |||
|id=chr10:104178857..104178919,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.30e-20;82!UBERON:0006215;2.53e-09;3!UBERON:0010122;9.17e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.80e-86!57;UBERON:0005068!2.80e-86!57;UBERON:0006241!2.80e-86!57;UBERON:0007135!2.80e-86!57;UBERON:0001017!1.34e-82!82;UBERON:0005743!5.95e-81!86;UBERON:0000073!1.30e-79!94;UBERON:0001016!1.30e-79!94;UBERON:0000955!1.49e-74!69;UBERON:0006238!1.49e-74!69;UBERON:0002616!6.32e-73!59;UBERON:0002780!3.32e-71!41;UBERON:0001890!3.32e-71!41;UBERON:0006240!3.32e-71!41;UBERON:0003080!2.94e-69!42;UBERON:0003075!4.06e-62!86;UBERON:0007284!4.06e-62!86;UBERON:0002346!5.76e-61!90;UBERON:0001893!3.07e-57!34;UBERON:0002020!3.82e-57!34;UBERON:0003528!3.82e-57!34;UBERON:0002791!3.95e-55!33;UBERON:0001869!5.46e-54!32;UBERON:0003056!2.65e-49!61;UBERON:0007023!3.10e-48!115;UBERON:0002619!6.97e-45!22;UBERON:0000924!9.84e-43!173;UBERON:0006601!9.84e-43!173;UBERON:0004121!1.12e-42!169;UBERON:0001950!7.13e-41!20;UBERON:0000033!4.61e-39!123;UBERON:0000956!7.13e-39!25;UBERON:0000203!7.13e-39!25;UBERON:0000153!1.53e-36!129;UBERON:0007811!1.53e-36!129;UBERON:0002420!3.73e-20!9;UBERON:0007245!3.73e-20!9;UBERON:0010009!3.73e-20!9;UBERON:0010011!3.73e-20!9;UBERON:0000454!3.73e-20!9;UBERON:0002308!1.10e-19!9;UBERON:0000125!1.10e-19!9;UBERON:0000025!6.04e-19!194;UBERON:0003076!1.54e-17!15;UBERON:0003057!1.54e-17!15;UBERON:0009663!4.06e-16!7;UBERON:0001894!4.77e-15!7;UBERON:0006222!4.77e-15!7;UBERON:0004732!2.11e-14!13;UBERON:0001871!2.82e-14!7;UBERON:0000200!3.86e-14!6;UBERON:0000064!5.29e-13!219;UBERON:0004733!8.16e-13!12;UBERON:0002028!8.16e-13!12;UBERON:0007277!8.16e-13!12;UBERON:0004111!1.81e-12!241;UBERON:0002021!5.62e-12!5;UBERON:0000349!7.02e-12!5;UBERON:0001872!8.38e-12!5;UBERON:0000483!9.05e-12!309;UBERON:0002298!1.03e-11!8;UBERON:0000119!1.66e-11!312;UBERON:0000369!1.11e-10!4;UBERON:0002435!1.11e-10!4;UBERON:0000204!1.11e-10!4;UBERON:0010082!1.11e-10!4;UBERON:0003296!2.47e-09!4;UBERON:0010133!2.47e-09!4;UBERON:0000477!5.06e-09!286;UBERON:0005383!1.91e-08!3;UBERON:0005382!1.91e-08!3;UBERON:0000475!2.52e-08!365;UBERON:0002680!3.64e-08!9;UBERON:0001895!3.64e-08!9;UBERON:0010092!3.64e-08!9;UBERON:0002771!4.71e-08!3;UBERON:0000062!1.09e-07!511;UBERON:0000988!5.25e-07!3;UBERON:0001896!9.79e-07!3;UBERON:0005290!9.79e-07!3;UBERON:0010096!9.79e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.95e-65;41!UBERON:0001890;3.95e-65;41!UBERON:0001869;5.67e-65;32!UBERON:0001893;4.68e-63;34!UBERON:0003528;1.54e-62;34!UBERON:0002020;1.54e-62;34!UBERON:0002791;6.26e-61;32!UBERON:0000073;2.06e-60;53!UBERON:0002616;2.06e-60;53!UBERON:0002619;2.87e-60;22!UBERON:0001950;7.46e-55;20!UBERON:0000956;1.42e-52;25!UBERON:0000203;1.42e-52;25!UBERON:0000955;1.45e-42;68!UBERON:0001017;3.64e-39;75!UBERON:0001016;2.12e-32;83!UBERON:0002420;7.99e-22;9!UBERON:0007245;7.99e-22;9!UBERON:0010009;7.99e-22;9!UBERON:0010011;7.99e-22;9!UBERON:0000454;7.99e-22;9!UBERON:0000125;2.84e-21;9!UBERON:0002308;2.84e-21;9!UBERON:0001894;1.03e-19;7!UBERON:0004732;3.06e-19;13!UBERON:0000200;1.70e-18;6!UBERON:0004733;4.25e-17;12!UBERON:0002028;4.25e-17;12!UBERON:0009663;2.05e-16;7!UBERON:0001871;4.25e-16;6!UBERON:0002298;9.41e-16;6!UBERON:0007023;1.31e-15;114!UBERON:0002021;1.41e-15;5!UBERON:0000349;1.79e-15;5!UBERON:0001872;2.18e-15;5!UBERON:0000369;7.55e-14;4!UBERON:0002435;7.55e-14;4!UBERON:0000204;7.55e-14;4!UBERON:0002784;4.62e-12;4!UBERON:0003296;4.97e-12;4!UBERON:0010133;4.97e-12;4!UBERON:0011216;1.59e-11;132!UBERON:0002680;7.66e-11;9!UBERON:0001895;7.66e-11;9!UBERON:0005383;7.66e-11;3!UBERON:0005382;7.66e-11;3!UBERON:0001870;6.62e-10;3!UBERON:0000988;5.65e-09;3!UBERON:0010314;8.31e-09;132!UBERON:0001896;1.80e-08;3!UBERON:0005290;1.80e-08;3!UBERON:0001873;9.17e-08;2!UBERON:0002771;1.83e-07;2!UBERON:0002702;3.55e-07;2!UBERON:0001876;3.66e-07;2!UBERON:0001875;3.77e-07;2!UBERON:0006514;3.77e-07;2!UBERON:0001905;5.49e-07;2!UBERON:0002757;5.49e-07;2!UBERON:0010134;5.49e-07;2!UBERON:0005408;5.49e-07;2!UBERON:0001899;5.49e-07;2!UBERON:0001954;5.66e-07;2!UBERON:0003022;5.66e-07;2!UBERON:0002421;5.66e-07;2!UBERON:0002600;5.66e-07;2!UBERON:0001897;9.92e-07;2!UBERON:0010225;9.92e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.06e-108,53;UBERON:0002616,6.06e-108,53;UBERON:0001049,3.63e-106,56;UBERON:0005068,3.63e-106,56;UBERON:0006241,3.63e-106,56;UBERON:0007135,3.63e-106,56;UBERON:0001017,4.99e-94,81;UBERON:0000955,4.91e-93,68;UBERON:0006238,4.91e-93,68;UBERON:0002780,8.84e-92,41;UBERON:0001890,8.84e-92,41;UBERON:0003080,8.84e-92,41;UBERON:0006240,8.84e-92,41;UBERON:0001016,4.30e-90,89;UBERON:0003075,2.13e-75,82;UBERON:0007284,2.13e-75,82;UBERON:0001869,4.63e-73,32;UBERON:0001893,5.62e-73,34;UBERON:0003528,7.48e-73,34;UBERON:0002020,7.48e-73,34;UBERON:0002346,2.37e-71,86;UBERON:0002791,7.78e-68,32;UBERON:0003056,1.63e-65,61;UBERON:0002619,2.92e-60,22;UBERON:0010371,5.79e-57,104;UBERON:0001950,7.81e-55,20;UBERON:0000956,1.44e-52,25;UBERON:0000203,1.44e-52,25;UBERON:0007023,3.74e-49,114;UBERON:0010314,1.65e-44,132;UBERON:0004121,4.87e-43,171;UBERON:0000924,4.87e-43,171;UBERON:0006601,4.87e-43,171;UBERON:0011216,3.17e-34,223;UBERON:0000025,2.58e-25,192;UBERON:0002420,8.21e-22,9;UBERON:0007245,8.21e-22,9;UBERON:0010009,8.21e-22,9;UBERON:0010011,8.21e-22,9;UBERON:0000454,8.21e-22,9;UBERON:0000125,3.04e-21,9;UBERON:0002308,3.04e-21,9;UBERON:0001894,9.70e-20,7;UBERON:0006222,9.70e-20,7;UBERON:0004732,3.00e-19,13;UBERON:0000200,1.63e-18,6;UBERON:0004111,7.73e-18,240;UBERON:0004733,4.25e-17,12;UBERON:0002028,4.25e-17,12;UBERON:0007277,4.25e-17,12;UBERON:0003076,1.84e-16,15;UBERON:0003057,1.84e-16,15;UBERON:0009663,2.03e-16,7;UBERON:0001871,4.53e-16,6;UBERON:0002298,9.29e-16,6;UBERON:0002021,1.35e-15,5;UBERON:0000349,1.82e-15,5;UBERON:0001872,2.31e-15,5;UBERON:0000369,7.56e-14,4;UBERON:0002435,7.56e-14,4;UBERON:0000204,7.56e-14,4;UBERON:0010082,7.56e-14,4;UBERON:0000483,1.01e-13,306;UBERON:0000119,1.81e-13,309;UBERON:0002784,4.49e-12,4;UBERON:0003296,4.90e-12,4;UBERON:0010133,4.90e-12,4;UBERON:0005383,7.67e-11,3;UBERON:0005382,7.67e-11,3;UBERON:0002680,8.56e-11,9;UBERON:0001895,8.56e-11,9;UBERON:0010092,8.56e-11,9;UBERON:0001870,6.43e-10,3;UBERON:0000988,6.60e-09,3;UBERON:0001896,1.52e-08,3;UBERON:0005290,1.52e-08,3;UBERON:0010096,1.52e-08,3;UBERON:0001873,9.17e-08,2;UBERON:0010122,9.17e-08,2;UBERON:0002771,1.89e-07,2;UBERON:0002702,3.60e-07,2;UBERON:0001875,3.72e-07,2;UBERON:0006514,3.72e-07,2;UBERON:0001876,3.83e-07,2;UBERON:0001905,5.49e-07,2;UBERON:0001954,5.49e-07,2;UBERON:0002757,5.49e-07,2;UBERON:0010134,5.49e-07,2;UBERON:0003022,5.49e-07,2;UBERON:0005408,5.49e-07,2;UBERON:0002421,5.49e-07,2;UBERON:0001899,5.49e-07,2;UBERON:0002600,5.49e-07,2;UBERON:0001897,9.64e-07,2;UBERON:0010225,9.64e-07,2 | |||
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| ||
|short_description=p4@PSD | |||
}} | }} |
Latest revision as of 01:10, 16 September 2015
Short description: | p4@PSD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PSD_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000020673, NM_002779, uc001kvg.1_5end |
EntrezGene: | PSD |
HGNC: | 9507 |
UniProt: | A5PKW4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data