FFCP PHASE1:Hg19::chr12:106633037..106633066,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10970 | |EntrezGene=10970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=16991 | |HGNC=16991 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-218bp_to_BC015436_5end | |association_with_transcript=-218bp_to_BC015436_5end | ||
|cluster_id=chr12:106633037..106633066,- | |||
|coexpression_cluster_id=C2181 | |coexpression_cluster_id=C2181 | ||
|description=CAGE_peak_10_at_CKAP4_5end | |description=CAGE_peak_10_at_CKAP4_5end | ||
|id=chr12:106633037..106633066,- | |id=chr12:106633037..106633066,- | ||
|ontology_enrichment_celltype=CL:0000055!5.47e-24!180;CL:0000548!5.80e-19!679;CL:0000004!5.80e-19!679;CL:0000255!5.80e-19!679;CL:0000012!4.24e-18!682;CL:0000144!3.97e-17!625;CL:0000192!8.64e-15!42;CL:0000514!8.64e-15!42;CL:0000680!1.19e-14!57;CL:0000056!1.19e-14!57;CL:0000355!1.19e-14!57;CL:0000183!2.32e-14!59;CL:0000222!2.57e-14!119;CL:0000187!7.04e-14!54;CL:0002371!1.11e-13!591;CL:0000359!3.34e-13!32;CL:0000057!6.30e-13!75;CL:0002321!4.89e-12!248;CL:0000220!6.24e-12!246;CL:0000393!7.79e-12!60;CL:0000211!7.79e-12!60;CL:0000003!2.77e-10!722;CL:0000048!3.35e-09!430;CL:0000723!5.55e-09!436;CL:0000034!1.39e-08!444 | |ontology_enrichment_celltype=CL:0000055!5.47e-24!180;CL:0000548!5.80e-19!679;CL:0000004!5.80e-19!679;CL:0000255!5.80e-19!679;CL:0000012!4.24e-18!682;CL:0000144!3.97e-17!625;CL:0000192!8.64e-15!42;CL:0000514!8.64e-15!42;CL:0000680!1.19e-14!57;CL:0000056!1.19e-14!57;CL:0000355!1.19e-14!57;CL:0000183!2.32e-14!59;CL:0000222!2.57e-14!119;CL:0000187!7.04e-14!54;CL:0002371!1.11e-13!591;CL:0000359!3.34e-13!32;CL:0000057!6.30e-13!75;CL:0002321!4.89e-12!248;CL:0000220!6.24e-12!246;CL:0000393!7.79e-12!60;CL:0000211!7.79e-12!60;CL:0000003!2.77e-10!722;CL:0000048!3.35e-09!430;CL:0000723!5.55e-09!436;CL:0000034!1.39e-08!444 | ||
|ontology_enrichment_celltype_v019=CL:0000359;8.97e-13;32!CL:0000192;1.85e-11;43!CL:0000134;6.86e-09;55!CL:0002539;7.96e-09;10!CL:0000048;2.97e-08;58!CL:0000723;7.44e-08;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.20e-14,427;CL:0000192,1.37e-14,43;CL:0000514,1.37e-14,43;CL:0000723,2.53e-14,433;CL:0000359,1.10e-13,32;CL:0000034,2.26e-13,441;CL:0000680,1.74e-12,58;CL:0000056,1.74e-12,58;CL:0000355,1.74e-12,58;CL:0000222,1.18e-11,121;CL:0000187,1.21e-11,55;CL:0000393,1.99e-10,61;CL:0000211,1.99e-10,61;CL:0000057,2.03e-09,76;CL:0002539,5.45e-09,10 | |||
|ontology_enrichment_development_v019=CL:0000514;1.85e-11;43 | |||
|ontology_enrichment_disease=DOID:2394!8.08e-08!14 | |ontology_enrichment_disease=DOID:2394!8.08e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.49e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.17e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0001637!1.04e-14!42;UBERON:0003509!1.04e-14!42;UBERON:0004572!1.04e-14!42;UBERON:0002049!1.56e-14!79;UBERON:0007798!1.56e-14!79;UBERON:0000055!2.69e-13!69;UBERON:0004290!7.11e-13!70;UBERON:0000914!1.02e-12!83;UBERON:0002329!1.02e-12!83;UBERON:0003077!1.02e-12!83;UBERON:0003059!1.02e-12!83;UBERON:0007282!1.02e-12!83;UBERON:0009618!1.02e-12!83;UBERON:0007285!1.02e-12!83;UBERON:0000486!1.45e-12!82;UBERON:0001134!2.79e-12!61;UBERON:0002036!2.79e-12!61;UBERON:0003082!2.79e-12!61;UBERON:0001981!7.64e-12!60;UBERON:0007500!7.64e-12!60;UBERON:0004537!7.64e-12!60;UBERON:0006965!7.64e-12!60;UBERON:0005256!8.27e-12!143;UBERON:0003914!8.66e-12!118;UBERON:0002385!9.05e-12!63;UBERON:0001015!9.05e-12!63;UBERON:0000383!9.05e-12!63;UBERON:0004872!1.67e-11!84;UBERON:0004573!3.91e-11!33;UBERON:0004571!3.91e-11!33;UBERON:0004535!9.50e-11!110;UBERON:0001009!1.12e-10!113;UBERON:0000490!3.60e-10!138;UBERON:0000468!1.15e-09!659;UBERON:0000926!9.16e-09!448;UBERON:0004120!9.16e-09!448;UBERON:0006603!9.16e-09!448;UBERON:0002100!3.08e-08!216;UBERON:0000480!1.13e-07!626;UBERON:0000467!1.56e-07!625 | |ontology_enrichment_uberon=UBERON:0001637!1.04e-14!42;UBERON:0003509!1.04e-14!42;UBERON:0004572!1.04e-14!42;UBERON:0002049!1.56e-14!79;UBERON:0007798!1.56e-14!79;UBERON:0000055!2.69e-13!69;UBERON:0004290!7.11e-13!70;UBERON:0000914!1.02e-12!83;UBERON:0002329!1.02e-12!83;UBERON:0003077!1.02e-12!83;UBERON:0003059!1.02e-12!83;UBERON:0007282!1.02e-12!83;UBERON:0009618!1.02e-12!83;UBERON:0007285!1.02e-12!83;UBERON:0000486!1.45e-12!82;UBERON:0001134!2.79e-12!61;UBERON:0002036!2.79e-12!61;UBERON:0003082!2.79e-12!61;UBERON:0001981!7.64e-12!60;UBERON:0007500!7.64e-12!60;UBERON:0004537!7.64e-12!60;UBERON:0006965!7.64e-12!60;UBERON:0005256!8.27e-12!143;UBERON:0003914!8.66e-12!118;UBERON:0002385!9.05e-12!63;UBERON:0001015!9.05e-12!63;UBERON:0000383!9.05e-12!63;UBERON:0004872!1.67e-11!84;UBERON:0004573!3.91e-11!33;UBERON:0004571!3.91e-11!33;UBERON:0004535!9.50e-11!110;UBERON:0001009!1.12e-10!113;UBERON:0000490!3.60e-10!138;UBERON:0000468!1.15e-09!659;UBERON:0000926!9.16e-09!448;UBERON:0004120!9.16e-09!448;UBERON:0006603!9.16e-09!448;UBERON:0002100!3.08e-08!216;UBERON:0000480!1.13e-07!626;UBERON:0000467!1.56e-07!625 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;5.47e-12;42!UBERON:0003509;5.47e-12;42!UBERON:0004572;5.47e-12;42!UBERON:0004573;7.85e-11;33!UBERON:0004571;7.85e-11;33!UBERON:0004237;7.96e-09;10!UBERON:0004695;7.96e-09;10!UBERON:0002111;7.96e-09;10!UBERON:0004178;7.96e-09;10!UBERON:0000947;3.69e-08;21!UBERON:0010191;3.69e-08;21!UBERON:0001135;2.16e-07;15!UBERON:0007500;8.46e-07;56!UBERON:0001981;8.46e-07;56!UBERON:0004537;8.46e-07;56 | |||
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| ||
|short_description=p10@CKAP4 | |short_description=p10@CKAP4 | ||
}} | }} |
Latest revision as of 02:19, 16 September 2015
Short description: | p10@CKAP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_CKAP4_5end |
Coexpression cluster: | C2181_Smooth_Fibroblast_leiomyoma_mesenchymal_hepatic_normal_Preadipocyte |
Association with transcript: | -218bp_to_BC015436_5end |
EntrezGene: | CKAP4 |
HGNC: | 16991 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.20e-14 | 427 |
smooth muscle cell | 1.37e-14 | 43 |
smooth muscle myoblast | 1.37e-14 | 43 |
somatic stem cell | 2.53e-14 | 433 |
vascular associated smooth muscle cell | 1.10e-13 | 32 |
stem cell | 2.26e-13 | 441 |
muscle precursor cell | 1.74e-12 | 58 |
myoblast | 1.74e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.74e-12 | 58 |
mesodermal cell | 1.18e-11 | 121 |
muscle cell | 1.21e-11 | 55 |
electrically responsive cell | 1.99e-10 | 61 |
electrically active cell | 1.99e-10 | 61 |
fibroblast | 2.03e-09 | 76 |
aortic smooth muscle cell | 5.45e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.17e-10 | 14 |