FFCP PHASE1:Hg19::chr12:106633037..106633066,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10970 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=16991 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-218bp_to_BC015436_5end | |||
|cluster_id=chr12:106633037..106633066,- | |||
|coexpression_cluster_id=C2181 | |||
|description=CAGE_peak_10_at_CKAP4_5end | |||
|id=chr12:106633037..106633066,- | |||
|ontology_enrichment_celltype=CL:0000055!5.47e-24!180;CL:0000548!5.80e-19!679;CL:0000004!5.80e-19!679;CL:0000255!5.80e-19!679;CL:0000012!4.24e-18!682;CL:0000144!3.97e-17!625;CL:0000192!8.64e-15!42;CL:0000514!8.64e-15!42;CL:0000680!1.19e-14!57;CL:0000056!1.19e-14!57;CL:0000355!1.19e-14!57;CL:0000183!2.32e-14!59;CL:0000222!2.57e-14!119;CL:0000187!7.04e-14!54;CL:0002371!1.11e-13!591;CL:0000359!3.34e-13!32;CL:0000057!6.30e-13!75;CL:0002321!4.89e-12!248;CL:0000220!6.24e-12!246;CL:0000393!7.79e-12!60;CL:0000211!7.79e-12!60;CL:0000003!2.77e-10!722;CL:0000048!3.35e-09!430;CL:0000723!5.55e-09!436;CL:0000034!1.39e-08!444 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.97e-13;32!CL:0000192;1.85e-11;43!CL:0000134;6.86e-09;55!CL:0002539;7.96e-09;10!CL:0000048;2.97e-08;58!CL:0000723;7.44e-08;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.20e-14,427;CL:0000192,1.37e-14,43;CL:0000514,1.37e-14,43;CL:0000723,2.53e-14,433;CL:0000359,1.10e-13,32;CL:0000034,2.26e-13,441;CL:0000680,1.74e-12,58;CL:0000056,1.74e-12,58;CL:0000355,1.74e-12,58;CL:0000222,1.18e-11,121;CL:0000187,1.21e-11,55;CL:0000393,1.99e-10,61;CL:0000211,1.99e-10,61;CL:0000057,2.03e-09,76;CL:0002539,5.45e-09,10 | |||
|ontology_enrichment_development_v019=CL:0000514;1.85e-11;43 | |||
|ontology_enrichment_disease=DOID:2394!8.08e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.49e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.17e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0001637!1.04e-14!42;UBERON:0003509!1.04e-14!42;UBERON:0004572!1.04e-14!42;UBERON:0002049!1.56e-14!79;UBERON:0007798!1.56e-14!79;UBERON:0000055!2.69e-13!69;UBERON:0004290!7.11e-13!70;UBERON:0000914!1.02e-12!83;UBERON:0002329!1.02e-12!83;UBERON:0003077!1.02e-12!83;UBERON:0003059!1.02e-12!83;UBERON:0007282!1.02e-12!83;UBERON:0009618!1.02e-12!83;UBERON:0007285!1.02e-12!83;UBERON:0000486!1.45e-12!82;UBERON:0001134!2.79e-12!61;UBERON:0002036!2.79e-12!61;UBERON:0003082!2.79e-12!61;UBERON:0001981!7.64e-12!60;UBERON:0007500!7.64e-12!60;UBERON:0004537!7.64e-12!60;UBERON:0006965!7.64e-12!60;UBERON:0005256!8.27e-12!143;UBERON:0003914!8.66e-12!118;UBERON:0002385!9.05e-12!63;UBERON:0001015!9.05e-12!63;UBERON:0000383!9.05e-12!63;UBERON:0004872!1.67e-11!84;UBERON:0004573!3.91e-11!33;UBERON:0004571!3.91e-11!33;UBERON:0004535!9.50e-11!110;UBERON:0001009!1.12e-10!113;UBERON:0000490!3.60e-10!138;UBERON:0000468!1.15e-09!659;UBERON:0000926!9.16e-09!448;UBERON:0004120!9.16e-09!448;UBERON:0006603!9.16e-09!448;UBERON:0002100!3.08e-08!216;UBERON:0000480!1.13e-07!626;UBERON:0000467!1.56e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;5.47e-12;42!UBERON:0003509;5.47e-12;42!UBERON:0004572;5.47e-12;42!UBERON:0004573;7.85e-11;33!UBERON:0004571;7.85e-11;33!UBERON:0004237;7.96e-09;10!UBERON:0004695;7.96e-09;10!UBERON:0002111;7.96e-09;10!UBERON:0004178;7.96e-09;10!UBERON:0000947;3.69e-08;21!UBERON:0010191;3.69e-08;21!UBERON:0001135;2.16e-07;15!UBERON:0007500;8.46e-07;56!UBERON:0001981;8.46e-07;56!UBERON:0004537;8.46e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.78e-17,42;UBERON:0003509,1.78e-17,42;UBERON:0004572,1.78e-17,42;UBERON:0002049,1.06e-12,78;UBERON:0007798,1.06e-12,78;UBERON:0007503,1.19e-12,78;UBERON:0004573,3.38e-12,33;UBERON:0004571,3.38e-12,33;UBERON:0007500,4.97e-12,59;UBERON:0001981,4.97e-12,59;UBERON:0004537,4.97e-12,59;UBERON:0006965,4.97e-12,59;UBERON:0007524,5.35e-12,73;UBERON:0004872,5.41e-12,83;UBERON:0002329,1.30e-11,71;UBERON:0003059,1.30e-11,71;UBERON:0007282,1.30e-11,71;UBERON:0004290,1.30e-11,71;UBERON:0009618,1.30e-11,71;UBERON:0000055,1.90e-11,68;UBERON:0003077,2.71e-11,72;UBERON:0007285,2.71e-11,72;UBERON:0001134,5.20e-11,62;UBERON:0002036,5.20e-11,62;UBERON:0003082,5.20e-11,62;UBERON:0003914,7.44e-11,117;UBERON:0000486,1.75e-10,83;UBERON:0004535,2.13e-10,109;UBERON:0002385,2.38e-10,64;UBERON:0001015,2.38e-10,64;UBERON:0000383,2.38e-10,64;UBERON:0005256,8.31e-10,122;UBERON:0001009,9.36e-10,112;UBERON:0000490,3.23e-09,148;UBERON:0004237,5.45e-09,10;UBERON:0004695,5.45e-09,10;UBERON:0002111,5.45e-09,10;UBERON:0004178,5.45e-09,10;UBERON:0000926,1.12e-08,315;UBERON:0004120,1.12e-08,315;UBERON:0006603,1.12e-08,315;UBERON:0000947,2.03e-08,21;UBERON:0010191,2.03e-08,21;UBERON:0003104,1.49e-07,160;UBERON:0009142,1.49e-07,160;UBERON:0001135,1.78e-07,15 | |||
|phase1_expression=0.726713517082227,1.71280419112787,0.422863212287913,1.0007329835313,1.34088328328186,4.36169262050184,2.53299878168311,1.26343974685366,0.261185628199839,1.47440361900905,0,0.436882744260345,1.05506791291381,0.74259811776028,0.331397375727916,2.01697543935533,1.20538905604795,2.92124036154949,3.41552959153355,0.984968464614303,1.22400414746552,1.25381888591235,0.286235987131057,0.410623275218653,0.502170558379211,0.0764134057479513,0,0,0.393364276848904,0.383829398097213,0,0,0.6024118375565,0.739508020333575,0,0,0,0,0.601633342410425,0.868043482863407,0,0,0,1.01778767145695,0.377875943688809,0.242584061187816,0.464858073811369,0,0.619412741790207,0.863077176966451,1.0246428261164,0.709446689665756,1.37898272294647,0,0,1.12945403725563,0.818718450173537,0.449446968890169,1.83650335422542,0.641858054152187,0.639337125799041,0.989553900560148,0.398927315243264,0,0.870627715885752,0,0,1.00499466102697,0.521482918420201,0.65156653411535,3.02699751316684,0,0.632924774881769,0.211255286311942,0,0,0.44931452458598,0.300353785683013,0.32145117339416,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0.670700859703636,1.02290049474824,0.722878304769133,2.00535164254356,1.73815822752988,0.795285947051099,2.43317435151318,1.13441780596881,1.10864698731282,1.22968699970376,0.0654895377488563,0,1.48313777113772,0,0,0.26591592103773,0,0,0,0,1.72046919021225,2.08284300964557,0,1.67799774483962,1.37559020970034,0.417989933073621,0.258416759169329,0.71153252537342,0.66944122552934,0.402829317109147,0,0.24406205754817,1.47065232138347,0.81014194788176,0.714397826272638,0.44905874525234,0.225222960966644,0,0.949265659568129,1.28241220751285,0,0,0.872188104285069,3.97577561356255,3.41902381494365,0.926864265692532,3.15520282823695,0.354668382198357,1.12135520028461,3.20246987189115,2.96001058100592,0,0.942974704487816,0.817309515567294,1.21085942115945,1.15235184896,0.937285727335186,0.312160076830321,0,1.19558944441441,0.352303495931295,0.323745888736263,0.280901613404497,0.408308342509787,0.982674538494144,0.516628905878827,1.18800285728205,1.23633464639278,0.910161361938026,1.43723628363248,1.0100166837244,0.500474079487857,0.277064115484183,1.31693286264251,0.612975591598039,0.45071417671979,1.92834711372036,2.33206526395521,1.49490172172997,0.847727604638247,3.00091096084402,0.618315175430633,0.772921620136887,1.67505170698431,2.53164498361899,1.26668106709558,1.26216887122057,0.920498986422993,0.484938170456436,4.26011511019937,1.41052937518696,0.847802961552438,0.57978255948989,1.36373060295417,0,0.731842236777572,0.265059536642971,0.929551542956147,0.621966330092223,0,0,3.12899064659632,2.57296375277154,1.38134921352481,1.39310378409594,2.16563844500876,0.473227200159376,1.51726221070292,0.482022059766964,1.10293972732394,1.08939722046203,0.949082476444386,0.404493924480493,0.588664395376038,1.15424147083917,1.4763109092493,0,2.4694440679884,0,0,0.982827216677626,1.18157981336281,0,0.368965315629341,1.3725424823882,0.658501712451753,0,0.603173834469785,1.01847289674383,0.325808305310325,1.03993478527958,0,0.231860809950154,1.52631302506568,1.87676382089396,0.462985512576611,1.14152491340759,0,0,0,0.234004265139238,0.297262324577456,0,0.16798212819886,0.141775097242386,0.268675568108545,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0.763976851116555,0,0,0.308482478109971,0,0,0,0.43596006883328,1.1734125731352,1.16344544182,0,0.845302752556,1.59562869950922,0,1.54324424557285,1.41849132023278,1.5985330740966,1.42977993658148,3.25572963234866,2.46972101034231,0.65147236858747,0.710783897485092,0.791951872933429,1.50719688529793,0.871533458600294,1.09970290300263,1.2162378064119,0,0,1.67737398844108,0,0,2.46128221334885,1.43833425785268,0.358121926479791,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,1.49801404789436,2.99161459204025,0.414415513436035,0.613457458595699,1.50051156317903,0.271265023699736,1.03985430765404,5.88815663030634,1.26161932027148,0.35142424497814,0.601892199455438,0,1.03473071292505,3.32112799267718,0.553107505625109,0.868836144680828,0.195801157462741,1.02943027143257,0,0.431428401637234,0.106727557803444,0,0,0.604780586659361,1.73675465473144,1.07423381301644,3.08726103876381,0.512556597022804,0.511707249066704,1.76939313257968,0,2.31314540703983,3.01854933032316,0.574890092096664,3.11552657510173,1.39452454151951,0.241718899183244,0.601519410909855,0.736647911487171,2.64073230778596,3.82391452814106,2.75361271414791,0.902399225814824,0.616122696835318,1.56869953835371,0,0.949964660035881,0,0.340187410553031,1.72732732881711,1.54227252690289,1.08378575017541,1.50506932156456,0.254876273045038,0,0.447749509444357,0,0.261435451024901,0.512900250232778,0.984043937099117,0,0,0.27470839445503,0.247528499761764,0,0.650060246036521,4.82051789532479,0.580024309752732,0.616194468458578,0.307007349452259,0.551346289938122,0.644521469209642,1.16013355131383,0.51135976449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| |||
|short_description=p10@CKAP4 | |||
}} |
Latest revision as of 02:19, 16 September 2015
Short description: | p10@CKAP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_CKAP4_5end |
Coexpression cluster: | C2181_Smooth_Fibroblast_leiomyoma_mesenchymal_hepatic_normal_Preadipocyte |
Association with transcript: | -218bp_to_BC015436_5end |
EntrezGene: | CKAP4 |
HGNC: | 16991 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.20e-14 | 427 |
smooth muscle cell | 1.37e-14 | 43 |
smooth muscle myoblast | 1.37e-14 | 43 |
somatic stem cell | 2.53e-14 | 433 |
vascular associated smooth muscle cell | 1.10e-13 | 32 |
stem cell | 2.26e-13 | 441 |
muscle precursor cell | 1.74e-12 | 58 |
myoblast | 1.74e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.74e-12 | 58 |
mesodermal cell | 1.18e-11 | 121 |
muscle cell | 1.21e-11 | 55 |
electrically responsive cell | 1.99e-10 | 61 |
electrically active cell | 1.99e-10 | 61 |
fibroblast | 2.03e-09 | 76 |
aortic smooth muscle cell | 5.45e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.17e-10 | 14 |