FFCP PHASE1:Hg19::chr4:152403542..152403579,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=729830 | |EntrezGene=729830 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34237 | |HGNC=34237 | ||
|TSSclassifier=strong | |||
|UniProt=D6RAG2 | |UniProt=D6RAG2 | ||
|association_with_transcript=-181bp_to_ENST00000512597_5end | |association_with_transcript=-181bp_to_ENST00000512597_5end | ||
|cluster_id=chr4:152403542..152403579,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_6_at_FAM160A1_5end | |description=CAGE_peak_6_at_FAM160A1_5end | ||
|id=chr4:152403542..152403579,+ | |id=chr4:152403542..152403579,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.80e-60;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!3.38e-44!20;UBERON:0002619!5.25e-40!22;UBERON:0001049!3.32e-39!57;UBERON:0005068!3.32e-39!57;UBERON:0006241!3.32e-39!57;UBERON:0007135!3.32e-39!57;UBERON:0001869!5.25e-38!32;UBERON:0002616!1.12e-37!59;UBERON:0000955!2.78e-36!69;UBERON:0006238!2.78e-36!69;UBERON:0002020!1.18e-35!34;UBERON:0003528!1.18e-35!34;UBERON:0001893!1.47e-35!34;UBERON:0000956!6.27e-35!25;UBERON:0000203!6.27e-35!25;UBERON:0002791!8.29e-33!33;UBERON:0005743!9.38e-33!86;UBERON:0001017!4.19e-32!82;UBERON:0000073!5.11e-29!94;UBERON:0001016!5.11e-29!94;UBERON:0002780!7.92e-29!41;UBERON:0001890!7.92e-29!41;UBERON:0006240!7.92e-29!41;UBERON:0003075!1.93e-28!86;UBERON:0007284!1.93e-28!86;UBERON:0003080!4.80e-28!42;UBERON:0002346!7.00e-27!90;UBERON:0007023!1.11e-24!115;UBERON:0000033!9.48e-21!123;UBERON:0003056!3.46e-20!61;UBERON:0001872!1.38e-19!5;UBERON:0000153!1.84e-19!129;UBERON:0007811!1.84e-19!129;UBERON:0001871!1.76e-17!7;UBERON:0004733!2.22e-15!12;UBERON:0002028!2.22e-15!12;UBERON:0007277!2.22e-15!12;UBERON:0004732!4.07e-14!13;UBERON:0004121!3.64e-13!169;UBERON:0000924!1.05e-12!173;UBERON:0006601!1.05e-12!173;UBERON:0003076!4.26e-12!15;UBERON:0003057!4.26e-12!15;UBERON:0002680!1.98e-11!9;UBERON:0001895!1.98e-11!9;UBERON:0010092!1.98e-11!9;UBERON:0000025!1.14e-10!194;UBERON:0000200!2.99e-10!6;UBERON:0001876!1.53e-09!2;UBERON:0004111!5.52e-08!241;UBERON:0002298!1.00e-07!8;UBERON:0002021!1.48e-07!5;UBERON:0002420!3.25e-07!9;UBERON:0007245!3.25e-07!9;UBERON:0010009!3.25e-07!9;UBERON:0010011!3.25e-07!9;UBERON:0000454!3.25e-07!9;UBERON:0000064!3.33e-07!219;UBERON:0002037!6.25e-07!6;UBERON:0006215!6.25e-07!6 | |ontology_enrichment_uberon=UBERON:0001950!3.38e-44!20;UBERON:0002619!5.25e-40!22;UBERON:0001049!3.32e-39!57;UBERON:0005068!3.32e-39!57;UBERON:0006241!3.32e-39!57;UBERON:0007135!3.32e-39!57;UBERON:0001869!5.25e-38!32;UBERON:0002616!1.12e-37!59;UBERON:0000955!2.78e-36!69;UBERON:0006238!2.78e-36!69;UBERON:0002020!1.18e-35!34;UBERON:0003528!1.18e-35!34;UBERON:0001893!1.47e-35!34;UBERON:0000956!6.27e-35!25;UBERON:0000203!6.27e-35!25;UBERON:0002791!8.29e-33!33;UBERON:0005743!9.38e-33!86;UBERON:0001017!4.19e-32!82;UBERON:0000073!5.11e-29!94;UBERON:0001016!5.11e-29!94;UBERON:0002780!7.92e-29!41;UBERON:0001890!7.92e-29!41;UBERON:0006240!7.92e-29!41;UBERON:0003075!1.93e-28!86;UBERON:0007284!1.93e-28!86;UBERON:0003080!4.80e-28!42;UBERON:0002346!7.00e-27!90;UBERON:0007023!1.11e-24!115;UBERON:0000033!9.48e-21!123;UBERON:0003056!3.46e-20!61;UBERON:0001872!1.38e-19!5;UBERON:0000153!1.84e-19!129;UBERON:0007811!1.84e-19!129;UBERON:0001871!1.76e-17!7;UBERON:0004733!2.22e-15!12;UBERON:0002028!2.22e-15!12;UBERON:0007277!2.22e-15!12;UBERON:0004732!4.07e-14!13;UBERON:0004121!3.64e-13!169;UBERON:0000924!1.05e-12!173;UBERON:0006601!1.05e-12!173;UBERON:0003076!4.26e-12!15;UBERON:0003057!4.26e-12!15;UBERON:0002680!1.98e-11!9;UBERON:0001895!1.98e-11!9;UBERON:0010092!1.98e-11!9;UBERON:0000025!1.14e-10!194;UBERON:0000200!2.99e-10!6;UBERON:0001876!1.53e-09!2;UBERON:0004111!5.52e-08!241;UBERON:0002298!1.00e-07!8;UBERON:0002021!1.48e-07!5;UBERON:0002420!3.25e-07!9;UBERON:0007245!3.25e-07!9;UBERON:0010009!3.25e-07!9;UBERON:0010011!3.25e-07!9;UBERON:0000454!3.25e-07!9;UBERON:0000064!3.33e-07!219;UBERON:0002037!6.25e-07!6;UBERON:0006215!6.25e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0001876;9.93e-41;2!UBERON:0002037;1.07e-30;6!UBERON:0001950;1.28e-23;20!UBERON:0002619;1.37e-21;22!UBERON:0002022;6.31e-21;1!UBERON:0002680;9.82e-21;9!UBERON:0001895;9.82e-21;9!UBERON:0000956;3.97e-19;25!UBERON:0000203;3.97e-19;25!UBERON:0000073;9.20e-19;53!UBERON:0002616;9.20e-19;53!UBERON:0001016;3.46e-17;83!UBERON:0000349;5.67e-17;5!UBERON:0004733;9.80e-16;12!UBERON:0002028;9.80e-16;12!UBERON:0004732;1.40e-14;13!UBERON:0002791;1.82e-13;32!UBERON:0001869;3.31e-13;32!UBERON:0003528;9.15e-13;34!UBERON:0002020;9.15e-13;34!UBERON:0000955;1.70e-12;68!UBERON:0001871;2.06e-12;6!UBERON:0002360;3.70e-11;2!UBERON:0000094;3.70e-11;2!UBERON:0010743;3.70e-11;2!UBERON:0001893;6.84e-11;34!UBERON:0001017;7.15e-11;75!UBERON:0002420;7.24e-10;9!UBERON:0007245;7.24e-10;9!UBERON:0010009;7.24e-10;9!UBERON:0010011;7.24e-10;9!UBERON:0000454;7.24e-10;9!UBERON:0002780;1.05e-09;41!UBERON:0001890;1.05e-09;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001876,8.98e-41,2;UBERON:0002037,1.13e-30,6;UBERON:0006215,1.13e-30,6;UBERON:0001950,1.37e-23,20;UBERON:0001017,2.01e-23,81;UBERON:0000073,3.62e-23,53;UBERON:0002616,3.62e-23,53;UBERON:0000955,1.55e-22,68;UBERON:0006238,1.55e-22,68;UBERON:0001049,6.16e-22,56;UBERON:0005068,6.16e-22,56;UBERON:0006241,6.16e-22,56;UBERON:0007135,6.16e-22,56;UBERON:0002619,1.46e-21,22;UBERON:0001016,4.23e-21,89;UBERON:0002022,5.16e-21,1;UBERON:0002680,1.02e-20,9;UBERON:0001895,1.02e-20,9;UBERON:0010092,1.02e-20,9;UBERON:0000956,4.21e-19,25;UBERON:0000203,4.21e-19,25;UBERON:0000349,5.45e-17,5;UBERON:0004733,1.00e-15,12;UBERON:0002028,1.00e-15,12;UBERON:0007277,1.00e-15,12;UBERON:0002791,4.28e-15,32;UBERON:0001869,4.28e-15,32;UBERON:0003075,5.56e-15,82;UBERON:0007284,5.56e-15,82;UBERON:0004732,1.44e-14,13;UBERON:0002346,2.81e-14,86;UBERON:0003528,3.04e-14,34;UBERON:0002020,3.04e-14,34;UBERON:0001893,3.04e-14,34;UBERON:0003076,1.02e-12,15;UBERON:0003057,1.02e-12,15;UBERON:0001871,2.00e-12,6;UBERON:0002780,6.78e-12,41;UBERON:0001890,6.78e-12,41;UBERON:0003080,6.78e-12,41;UBERON:0006240,6.78e-12,41;UBERON:0010371,9.03e-12,104;UBERON:0002360,3.70e-11,2;UBERON:0000094,3.70e-11,2;UBERON:0010743,3.70e-11,2;UBERON:0004121,5.90e-11,171;UBERON:0000924,5.90e-11,171;UBERON:0006601,5.90e-11,171;UBERON:0002420,7.08e-10,9;UBERON:0007245,7.08e-10,9;UBERON:0010009,7.08e-10,9;UBERON:0010011,7.08e-10,9;UBERON:0000454,7.08e-10,9;UBERON:0010314,3.30e-09,132;UBERON:0007023,2.49e-08,114;UBERON:0011216,2.87e-08,223;UBERON:0003056,4.35e-08,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,2.98244294329889,4.50142132513641,0,0,0,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0.344743373241465,0,0,0,0,21.3614430843917,6.7453348558047,2.06883333267483,1.09692698576986,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41023272848151,1.00828678488687,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0.147856086217045,0.202612753855184,0.781078098613847,0.413373593002368,0.126831620387814,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0,0.40781839786099,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271965960763659,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,2.98244294329889,4.50142132513641,0,0,0,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0.344743373241465,0,0,0,0,21.3614430843917,6.7453348558047,2.06883333267483,1.09692698576986,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41023272848151,1.00828678488687,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0.147856086217045,0.202612753855184,0.781078098613847,0.413373593002368,0.126831620387814,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0,0.40781839786099,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271965960763659,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p6@FAM160A1 | |short_description=p6@FAM160A1 | ||
}} | }} |
Latest revision as of 02:46, 16 September 2015
Short description: | p6@FAM160A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FAM160A1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -181bp_to_ENST00000512597_5end |
EntrezGene: | FAM160A1 |
HGNC: | 34237 |
UniProt: | D6RAG2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data