FFCP PHASE1:Hg19::chr5:149466042..149466143,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1436 | |EntrezGene=1436 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2433 | |HGNC=2433 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000502660_5end | |association_with_transcript=0bp_to_ENST00000502660_5end | ||
|cluster_id=chr5:149466042..149466143,- | |||
|coexpression_cluster_id=C294 | |coexpression_cluster_id=C294 | ||
|description=CAGE_peak_1_at_CSF1R_5end | |description=CAGE_peak_1_at_CSF1R_5end | ||
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|ontology_enrichment_celltype=CL:0002009!1.30e-40!65;CL:0000766!1.43e-40!76;CL:0000557!1.12e-39!71;CL:0002194!9.79e-39!63;CL:0000576!9.79e-39!63;CL:0000040!9.79e-39!63;CL:0000559!9.79e-39!63;CL:0000763!7.34e-38!112;CL:0000049!7.34e-38!112;CL:0000839!3.90e-35!70;CL:0002057!9.32e-33!42;CL:0000037!3.39e-30!172;CL:0000566!3.39e-30!172;CL:0000860!3.32e-29!45;CL:0000738!1.10e-28!140;CL:0002032!8.84e-28!165;CL:0000837!8.84e-28!165;CL:0000988!2.93e-26!182;CL:0002087!5.86e-25!119;CL:0002031!1.19e-23!124;CL:0002393!2.47e-09!9;CL:0002397!2.47e-09!9 | |ontology_enrichment_celltype=CL:0002009!1.30e-40!65;CL:0000766!1.43e-40!76;CL:0000557!1.12e-39!71;CL:0002194!9.79e-39!63;CL:0000576!9.79e-39!63;CL:0000040!9.79e-39!63;CL:0000559!9.79e-39!63;CL:0000763!7.34e-38!112;CL:0000049!7.34e-38!112;CL:0000839!3.90e-35!70;CL:0002057!9.32e-33!42;CL:0000037!3.39e-30!172;CL:0000566!3.39e-30!172;CL:0000860!3.32e-29!45;CL:0000738!1.10e-28!140;CL:0002032!8.84e-28!165;CL:0000837!8.84e-28!165;CL:0000988!2.93e-26!182;CL:0002087!5.86e-25!119;CL:0002031!1.19e-23!124;CL:0002393!2.47e-09!9;CL:0002397!2.47e-09!9 | ||
|ontology_enrichment_celltype_v019=CL:0000576;1.37e-25;48!CL:0000473;2.62e-25;39!CL:0000234;2.62e-25;39!CL:0000860;2.11e-24;33!CL:0002057;2.11e-24;33!CL:0000766;9.36e-20;69!CL:0000763;2.04e-11;100!CL:0002087;2.01e-07;104!CL:0000738;2.08e-07;136!CL:0000235;3.39e-07;6!CL:0002393;6.02e-07;6!CL:0002397;6.02e-07;6 | |ontology_enrichment_celltype_v019=CL:0000576;1.37e-25;48!CL:0000473;2.62e-25;39!CL:0000234;2.62e-25;39!CL:0000860;2.11e-24;33!CL:0002057;2.11e-24;33!CL:0000766;9.36e-20;69!CL:0000763;2.04e-11;100!CL:0002087;2.01e-07;104!CL:0000738;2.08e-07;136!CL:0000235;3.39e-07;6!CL:0002393;6.02e-07;6!CL:0002397;6.02e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002009,6.93e-49,61;CL:0000766,3.06e-47,72;CL:0002194,8.49e-47,59;CL:0000576,8.49e-47,59;CL:0000040,8.49e-47,59;CL:0000559,8.49e-47,59;CL:0000557,2.02e-46,67;CL:0000839,2.53e-41,66;CL:0000473,3.45e-41,48;CL:0000234,3.45e-41,48;CL:0000763,5.28e-38,108;CL:0000049,5.28e-38,108;CL:0000860,2.54e-35,42;CL:0002057,2.54e-35,42;CL:0000738,3.75e-29,136;CL:0000037,1.18e-27,168;CL:0002087,2.89e-26,115;CL:0002032,3.78e-25,161;CL:0000837,3.78e-25,161;CL:0000988,1.93e-24,177;CL:0002031,2.57e-24,120;CL:0002393,5.70e-10,9;CL:0002397,5.70e-10,9;CL:0000235,3.39e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.24e-25;42!CL:0000049;6.95e-12;108 | |ontology_enrichment_development_v019=CL:0002057;2.24e-25;42!CL:0000049;6.95e-12;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.71e-57!115;UBERON:0002390!8.09e-40!102;UBERON:0003061!8.09e-40!102;UBERON:0002193!1.31e-35!112;UBERON:0002371!4.19e-33!80;UBERON:0001474!8.22e-29!86;UBERON:0002405!1.67e-24!115;UBERON:0001049!1.59e-23!57;UBERON:0005068!1.59e-23!57;UBERON:0006241!1.59e-23!57;UBERON:0007135!1.59e-23!57;UBERON:0004765!4.54e-22!101;UBERON:0001434!4.54e-22!101;UBERON:0002616!3.31e-18!59;UBERON:0003080!6.42e-18!42;UBERON:0002780!2.01e-17!41;UBERON:0001890!2.01e-17!41;UBERON:0006240!2.01e-17!41;UBERON:0000955!3.05e-15!69;UBERON:0006238!3.05e-15!69;UBERON:0001017!6.12e-15!82;UBERON:0001893!2.16e-14!34;UBERON:0003075!2.43e-14!86;UBERON:0007284!2.43e-14!86;UBERON:0002020!3.22e-14!34;UBERON:0003528!3.22e-14!34;UBERON:0005743!3.24e-14!86;UBERON:0002791!6.45e-14!33;UBERON:0001869!5.76e-13!32;UBERON:0002346!7.50e-13!90;UBERON:0000073!1.04e-11!94;UBERON:0001016!1.04e-11!94;UBERON:0002619!1.14e-11!22;UBERON:0003081!3.38e-11!216;UBERON:0001950!1.80e-10!20;UBERON:0003056!1.50e-09!61;UBERON:0000956!2.06e-09!25;UBERON:0000203!2.06e-09!25;UBERON:0000062!4.15e-09!511;UBERON:0002204!3.41e-08!167;UBERON:0000479!7.42e-08!787;UBERON:0000178!4.25e-07!15;UBERON:0000179!4.25e-07!15;UBERON:0000463!4.25e-07!15;UBERON:0003076!7.96e-07!15;UBERON:0003057!7.96e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!5.71e-57!115;UBERON:0002390!8.09e-40!102;UBERON:0003061!8.09e-40!102;UBERON:0002193!1.31e-35!112;UBERON:0002371!4.19e-33!80;UBERON:0001474!8.22e-29!86;UBERON:0002405!1.67e-24!115;UBERON:0001049!1.59e-23!57;UBERON:0005068!1.59e-23!57;UBERON:0006241!1.59e-23!57;UBERON:0007135!1.59e-23!57;UBERON:0004765!4.54e-22!101;UBERON:0001434!4.54e-22!101;UBERON:0002616!3.31e-18!59;UBERON:0003080!6.42e-18!42;UBERON:0002780!2.01e-17!41;UBERON:0001890!2.01e-17!41;UBERON:0006240!2.01e-17!41;UBERON:0000955!3.05e-15!69;UBERON:0006238!3.05e-15!69;UBERON:0001017!6.12e-15!82;UBERON:0001893!2.16e-14!34;UBERON:0003075!2.43e-14!86;UBERON:0007284!2.43e-14!86;UBERON:0002020!3.22e-14!34;UBERON:0003528!3.22e-14!34;UBERON:0005743!3.24e-14!86;UBERON:0002791!6.45e-14!33;UBERON:0001869!5.76e-13!32;UBERON:0002346!7.50e-13!90;UBERON:0000073!1.04e-11!94;UBERON:0001016!1.04e-11!94;UBERON:0002619!1.14e-11!22;UBERON:0003081!3.38e-11!216;UBERON:0001950!1.80e-10!20;UBERON:0003056!1.50e-09!61;UBERON:0000956!2.06e-09!25;UBERON:0000203!2.06e-09!25;UBERON:0000062!4.15e-09!511;UBERON:0002204!3.41e-08!167;UBERON:0000479!7.42e-08!787;UBERON:0000178!4.25e-07!15;UBERON:0000179!4.25e-07!15;UBERON:0000463!4.25e-07!15;UBERON:0003076!7.96e-07!15;UBERON:0003057!7.96e-07!15 | ||
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| ||
|short_description=p1@CSF1R | |short_description=p1@CSF1R | ||
}} | }} |
Latest revision as of 02:46, 16 September 2015
Short description: | p1@CSF1R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CSF1R_5end |
Coexpression cluster: | C294_CD14_Macrophage_Monocytederived_CD14CD16_Neutrophils_Basophils_Peripheral |
Association with transcript: | 0bp_to_ENST00000502660_5end |
EntrezGene: | CSF1R |
HGNC: | 2433 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 6.93e-49 | 61 |
myeloid leukocyte | 3.06e-47 | 72 |
monopoietic cell | 8.49e-47 | 59 |
monocyte | 8.49e-47 | 59 |
monoblast | 8.49e-47 | 59 |
promonocyte | 8.49e-47 | 59 |
granulocyte monocyte progenitor cell | 2.02e-46 | 67 |
myeloid lineage restricted progenitor cell | 2.53e-41 | 66 |
defensive cell | 3.45e-41 | 48 |
phagocyte | 3.45e-41 | 48 |
myeloid cell | 5.28e-38 | 108 |
common myeloid progenitor | 5.28e-38 | 108 |
classical monocyte | 2.54e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.54e-35 | 42 |
leukocyte | 3.75e-29 | 136 |
hematopoietic stem cell | 1.18e-27 | 168 |
nongranular leukocyte | 2.89e-26 | 115 |
hematopoietic oligopotent progenitor cell | 3.78e-25 | 161 |
hematopoietic multipotent progenitor cell | 3.78e-25 | 161 |
hematopoietic cell | 1.93e-24 | 177 |
hematopoietic lineage restricted progenitor cell | 2.57e-24 | 120 |
intermediate monocyte | 5.70e-10 | 9 |
CD14-positive, CD16-positive monocyte | 5.70e-10 | 9 |
macrophage | 3.39e-07 | 6 |