FFCP PHASE1:Hg19::chr5:149466042..149466143,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:149466042..149466143,- to FFCP PHASE1:Hg19::chr5:149466042..149466143,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1436 | |EntrezGene=1436 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2433 | |HGNC=2433 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000502660_5end | |||
|cluster_id=chr5:149466042..149466143,- | |||
|coexpression_cluster_id=C294 | |||
|description=CAGE_peak_1_at_CSF1R_5end | |||
|id=chr5:149466042..149466143,- | |||
|ontology_enrichment_celltype=CL:0002009!1.30e-40!65;CL:0000766!1.43e-40!76;CL:0000557!1.12e-39!71;CL:0002194!9.79e-39!63;CL:0000576!9.79e-39!63;CL:0000040!9.79e-39!63;CL:0000559!9.79e-39!63;CL:0000763!7.34e-38!112;CL:0000049!7.34e-38!112;CL:0000839!3.90e-35!70;CL:0002057!9.32e-33!42;CL:0000037!3.39e-30!172;CL:0000566!3.39e-30!172;CL:0000860!3.32e-29!45;CL:0000738!1.10e-28!140;CL:0002032!8.84e-28!165;CL:0000837!8.84e-28!165;CL:0000988!2.93e-26!182;CL:0002087!5.86e-25!119;CL:0002031!1.19e-23!124;CL:0002393!2.47e-09!9;CL:0002397!2.47e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.37e-25;48!CL:0000473;2.62e-25;39!CL:0000234;2.62e-25;39!CL:0000860;2.11e-24;33!CL:0002057;2.11e-24;33!CL:0000766;9.36e-20;69!CL:0000763;2.04e-11;100!CL:0002087;2.01e-07;104!CL:0000738;2.08e-07;136!CL:0000235;3.39e-07;6!CL:0002393;6.02e-07;6!CL:0002397;6.02e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,6.93e-49,61;CL:0000766,3.06e-47,72;CL:0002194,8.49e-47,59;CL:0000576,8.49e-47,59;CL:0000040,8.49e-47,59;CL:0000559,8.49e-47,59;CL:0000557,2.02e-46,67;CL:0000839,2.53e-41,66;CL:0000473,3.45e-41,48;CL:0000234,3.45e-41,48;CL:0000763,5.28e-38,108;CL:0000049,5.28e-38,108;CL:0000860,2.54e-35,42;CL:0002057,2.54e-35,42;CL:0000738,3.75e-29,136;CL:0000037,1.18e-27,168;CL:0002087,2.89e-26,115;CL:0002032,3.78e-25,161;CL:0000837,3.78e-25,161;CL:0000988,1.93e-24,177;CL:0002031,2.57e-24,120;CL:0002393,5.70e-10,9;CL:0002397,5.70e-10,9;CL:0000235,3.39e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.24e-25;42!CL:0000049;6.95e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.71e-57!115;UBERON:0002390!8.09e-40!102;UBERON:0003061!8.09e-40!102;UBERON:0002193!1.31e-35!112;UBERON:0002371!4.19e-33!80;UBERON:0001474!8.22e-29!86;UBERON:0002405!1.67e-24!115;UBERON:0001049!1.59e-23!57;UBERON:0005068!1.59e-23!57;UBERON:0006241!1.59e-23!57;UBERON:0007135!1.59e-23!57;UBERON:0004765!4.54e-22!101;UBERON:0001434!4.54e-22!101;UBERON:0002616!3.31e-18!59;UBERON:0003080!6.42e-18!42;UBERON:0002780!2.01e-17!41;UBERON:0001890!2.01e-17!41;UBERON:0006240!2.01e-17!41;UBERON:0000955!3.05e-15!69;UBERON:0006238!3.05e-15!69;UBERON:0001017!6.12e-15!82;UBERON:0001893!2.16e-14!34;UBERON:0003075!2.43e-14!86;UBERON:0007284!2.43e-14!86;UBERON:0002020!3.22e-14!34;UBERON:0003528!3.22e-14!34;UBERON:0005743!3.24e-14!86;UBERON:0002791!6.45e-14!33;UBERON:0001869!5.76e-13!32;UBERON:0002346!7.50e-13!90;UBERON:0000073!1.04e-11!94;UBERON:0001016!1.04e-11!94;UBERON:0002619!1.14e-11!22;UBERON:0003081!3.38e-11!216;UBERON:0001950!1.80e-10!20;UBERON:0003056!1.50e-09!61;UBERON:0000956!2.06e-09!25;UBERON:0000203!2.06e-09!25;UBERON:0000062!4.15e-09!511;UBERON:0002204!3.41e-08!167;UBERON:0000479!7.42e-08!787;UBERON:0000178!4.25e-07!15;UBERON:0000179!4.25e-07!15;UBERON:0000463!4.25e-07!15;UBERON:0003076!7.96e-07!15;UBERON:0003057!7.96e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.56e-15;114!UBERON:0002780;4.20e-14;41!UBERON:0001890;4.20e-14;41!UBERON:0001893;3.76e-13;34!UBERON:0003528;6.17e-13;34!UBERON:0002020;6.17e-13;34!UBERON:0002791;8.00e-13;32!UBERON:0000073;1.01e-12;53!UBERON:0002616;1.01e-12;53!UBERON:0001869;1.35e-12;32!UBERON:0002619;1.70e-12;22!UBERON:0001950;3.37e-11;20!UBERON:0000956;3.40e-10;25!UBERON:0000203;3.40e-10;25!UBERON:0000178;1.05e-07;15!UBERON:0000179;1.05e-07;15!UBERON:0000463;1.05e-07;15!UBERON:0000955;1.66e-07;68!UBERON:0001017;2.01e-07;75!UBERON:0002420;4.25e-07;9!UBERON:0007245;4.25e-07;9!UBERON:0010009;4.25e-07;9!UBERON:0010011;4.25e-07;9!UBERON:0000454;4.25e-07;9!UBERON:0000125;5.86e-07;9!UBERON:0002308;5.86e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.42e-61,114;UBERON:0002390,2.17e-46,98;UBERON:0003061,2.17e-46,98;UBERON:0002193,9.29e-42,108;UBERON:0002371,5.92e-39,76;UBERON:0002405,1.36e-34,93;UBERON:0001474,4.02e-34,82;UBERON:0004765,9.60e-29,90;UBERON:0001434,2.79e-24,100;UBERON:0001049,2.45e-23,56;UBERON:0005068,2.45e-23,56;UBERON:0006241,2.45e-23,56;UBERON:0007135,2.45e-23,56;UBERON:0000073,2.90e-21,53;UBERON:0002616,2.90e-21,53;UBERON:0002780,7.04e-19,41;UBERON:0001890,7.04e-19,41;UBERON:0003080,7.04e-19,41;UBERON:0006240,7.04e-19,41;UBERON:0003081,1.37e-16,203;UBERON:0001893,1.35e-15,34;UBERON:0003528,2.09e-15,34;UBERON:0002020,2.09e-15,34;UBERON:0000955,2.48e-15,68;UBERON:0006238,2.48e-15,68;UBERON:0001017,2.61e-15,81;UBERON:0003075,2.55e-14,82;UBERON:0007284,2.55e-14,82;UBERON:0002791,2.68e-14,32;UBERON:0001869,4.77e-14,32;UBERON:0002346,7.20e-13,86;UBERON:0001016,1.01e-12,89;UBERON:0002619,1.70e-12,22;UBERON:0000479,2.28e-11,773;UBERON:0001950,3.37e-11,20;UBERON:0003056,3.37e-10,61;UBERON:0000956,3.40e-10,25;UBERON:0000203,3.40e-10,25;UBERON:0000923,4.10e-10,560;UBERON:0010316,4.10e-10,560;UBERON:0005291,4.10e-10,560;UBERON:0006598,4.10e-10,560;UBERON:0010317,4.10e-10,560;UBERON:0002532,4.10e-10,560;UBERON:0002050,5.09e-10,564;UBERON:0002204,1.59e-09,167;UBERON:0005423,6.29e-09,581;UBERON:0010371,1.71e-08,104;UBERON:0000922,1.71e-08,592;UBERON:0000178,1.04e-07,15;UBERON:0000179,1.04e-07,15;UBERON:0000463,1.04e-07,15;UBERON:0002420,4.20e-07,9;UBERON:0007245,4.20e-07,9;UBERON:0010009,4.20e-07,9;UBERON:0010011,4.20e-07,9;UBERON:0000454,4.20e-07,9;UBERON:0000125,5.81e-07,9;UBERON:0002308,5.81e-07,9;UBERON:0010314,7.33e-07,132 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,4.03395087871065,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0,170.720096152424,50.2816511507349,141.347120587577,0,0,0,0,0,24.0752360254575,100.827164352802,151.210513392487,105.467283167904,776.091033715578,478.067051044014,718.63583369938,283.96276033649,213.877784127866,282.853015344994,147.127580361298,101.558468341391,79.5945373200416,110.186186259384,86.8384795133651,64.7961309894723,113.421328962348,74.8762232957238,69.0675081631143,168.288651551089,121.716142925799,94.6085869513806,128.86131868815,109.436798232948,131.064110788803,120.065873267965,95.5430920007617,98.4579173730524,74.8739835661747,51.0646702222026,61.6594026505619,124.368089302088,79.2654035998706,72.5410741315089,82.3343323581382,44.5615939544953,41.4565727547559,495.393646401503,486.01342972009,350.129937998988,298.794158849677,261.608147329904,218.747523494726,520.43327007152,637.329033745885,604.983677268468,0,0.546138611262131,1.77901850772711,8.53460445133014,1.20118796110804,2.29900975981793,3.30522436392431,1.90810750907073,0.569212969109448,5.87237189370939,2.29363936875137,0,3.92355994087075,19.7538063581308,0.393419540227666,0,1.85041349099558,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0.34362744548263,0.253019692019503,3.82278497188916,0,0.950452044448374,16.7138382176328,10.6228887258167,14.9916871862815,17.0479621471692,2.46338399076314,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.527008714158756,42.6336890745055,0,0,294.039938651143,347.04056643744,277.350305642353,8.82415309929765,9.15191857248205,2.97166001063652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,3.54668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0.464367928031979,0,0,0.168584690078102,0,0,0,0,0.269662616320329,0,0,0,0,0,0,10.1404027857465,19.6565443335525,41.3552934676983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,391.977473691137,217.85797084463,302.464415257562,0,0,0,0,0,0,0,0,1.86595303986695,0.720599767084807,1.2624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,167.840817284843,254.142088264656,181.317187955407,0,0,0,0,0,0,0,4.92576900504818,0.431255149719035,5.13372145118993,0,0,0,7.03568314404265,0,12.7331194071021,26.9245313283622,28.1802549136504,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,127.575872117822,173.218503257349,115.479217543327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,56.8786384295427,0,0,0,0,0,0,0,0,0,0,0,1.19317278382541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0982349809975,0,0,0,0,0,0.844430541190656,0,0,0,0,4.02181365321472,0,57.6160060753888,0,0,0,0,92.3554648802548,64.9941626071019,115.638378996355,73.8518503919146,92.5565114443937,101.810309857257,91.2653128932414,134.038154793732,0,0,0,0,0,0,0,0,15.8949457209864,0.635020748171649,4.22008522356922,26.6757319207786,92.663279687476,0.313359791546046,57.6459297307154,4.06300266723848,13.1682221585034,49.0373288474246,11.4978484176388,40.1901253364245,43.628188531801,56.1427030809964,58.0635013157442,0.781552381608161,0,0,0,0,0,0,132.150377703248,0,0,0,1.43246690842614,3.8605408508243,0,40.7600535584182,112.957541377642,0,0.16480387422676,0,49.8119970627674,48.0734013024197,0,0,0,0,0,0,39.3910725074691,29.691665096717,88.6087441683677,0,55.2519665274275,52.5067435596078,21.9575177801314,0,0,46.3999728278268,0,0,0,0,0,0,38.9726209758089,89.1207681441765,6.10326945268333,16.8080475095461,18.6194999940735,26.7650184527846,0,0,33.3964121906479,0,0,0.179515288819544,0,9.57003479195758,1.09917112082235,27.1847735769504,0,4.08148666627064,0.332423363800313,0,0,0,0,0.158936578980379,0,0,0,0,24.8815482769626,55.816723201607,36.6618086960175,0,0,0,138.846333940195,46.5495035433297,66.7653670317217,0,0,0,12.2321164883311,35.0873076541125,17.7522201745684,159.482926982304,0,0,0,0,0,0,0,0,0,0,0,88.4116941304673,0,0,0,0,24.9261772375238,0,39.9985911181542,0,0,46.4068134356591,0,0,46.1058468637002,0,0,0,0,0,0,0,0,0,0,0,40.2281593435559,125.268421686174,158.405769203046,0,0,38.5409713755711,39.6447533540213,9.33234931949858,18.3704680459072,33.050405706516,23.2098315739547,25.6640864899294,0,0,0,0,0,0,0,49.3042407681768,111.141979387046,0,0,0,357.933461458437,476.662004007697,60.6280575447086,0,41.8458305758742,27.800931711549,0,0,0,92.1956971021643,34.4287824590024,0,0,0,0,0,0.738832686744051,0,0,79.7244151208769,78.1790644582106,34.6478323048955,84.2321673100935,0,0,74.7511887973863,32.8556997658302,68.3494441322873,164.727119241568,0,0,0,2.72008901684737,10.7796654429761,13.4792053775923,2.29510841496863,0,14.1770908794718,18.5479922650984,60.3420286005329,34.4045517414043,126.680976855085,113.077549756259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,70.2352855650792,0,0.26572968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| ||
|short_description=p1@CSF1R | |||
}} | }} |
Latest revision as of 02:46, 16 September 2015
Short description: | p1@CSF1R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CSF1R_5end |
Coexpression cluster: | C294_CD14_Macrophage_Monocytederived_CD14CD16_Neutrophils_Basophils_Peripheral |
Association with transcript: | 0bp_to_ENST00000502660_5end |
EntrezGene: | CSF1R |
HGNC: | 2433 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 6.93e-49 | 61 |
myeloid leukocyte | 3.06e-47 | 72 |
monopoietic cell | 8.49e-47 | 59 |
monocyte | 8.49e-47 | 59 |
monoblast | 8.49e-47 | 59 |
promonocyte | 8.49e-47 | 59 |
granulocyte monocyte progenitor cell | 2.02e-46 | 67 |
myeloid lineage restricted progenitor cell | 2.53e-41 | 66 |
defensive cell | 3.45e-41 | 48 |
phagocyte | 3.45e-41 | 48 |
myeloid cell | 5.28e-38 | 108 |
common myeloid progenitor | 5.28e-38 | 108 |
classical monocyte | 2.54e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.54e-35 | 42 |
leukocyte | 3.75e-29 | 136 |
hematopoietic stem cell | 1.18e-27 | 168 |
nongranular leukocyte | 2.89e-26 | 115 |
hematopoietic oligopotent progenitor cell | 3.78e-25 | 161 |
hematopoietic multipotent progenitor cell | 3.78e-25 | 161 |
hematopoietic cell | 1.93e-24 | 177 |
hematopoietic lineage restricted progenitor cell | 2.57e-24 | 120 |
intermediate monocyte | 5.70e-10 | 9 |
CD14-positive, CD16-positive monocyte | 5.70e-10 | 9 |
macrophage | 3.39e-07 | 6 |