FFCP PHASE1:Hg19::chr19:14228541..14228582,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5566 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9380 | |||
|TSSclassifier=strong | |||
|UniProt=P17612 | |||
|association_with_transcript=0bp_to_ENST00000308677,ENST00000535695,NM_002730,uc002myc.2_5end | |||
|cluster_id=chr19:14228541..14228582,- | |||
|description=CAGE_peak_1_at_PRKACA_5end | |||
|id=chr19:14228541..14228582,- | |||
|ontology_enrichment_celltype=CL:0000222!1.09e-10!119;CL:0000183!1.38e-09!59;CL:0000680!6.06e-08!57;CL:0000056!6.06e-08!57;CL:0000355!6.06e-08!57;CL:0000187!8.77e-08!54;CL:0000192!2.56e-07!42;CL:0000514!2.56e-07!42;CL:0000115!3.74e-07!35 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.93e-11,121;CL:0000680,4.77e-08,58;CL:0000056,4.77e-08,58;CL:0000355,4.77e-08,58;CL:0000187,6.92e-08,55;CL:0000192,2.04e-07,43;CL:0000514,2.04e-07,43;CL:0000115,2.09e-07,36;CL:0002078,7.46e-07,45 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!2.76e-21!625;UBERON:0000480!5.09e-21!626;UBERON:0000468!5.30e-20!659;UBERON:0002050!3.41e-19!605;UBERON:0005423!3.41e-19!605;UBERON:0007023!4.16e-19!115;UBERON:0000923!6.76e-19!604;UBERON:0005291!6.76e-19!604;UBERON:0006598!6.76e-19!604;UBERON:0002532!6.76e-19!604;UBERON:0000922!2.74e-18!612;UBERON:0000477!3.06e-18!286;UBERON:0000025!3.64e-18!194;UBERON:0000119!4.83e-18!312;UBERON:0000483!1.66e-17!309;UBERON:0004111!2.38e-17!241;UBERON:0003081!5.83e-15!216;UBERON:0001009!1.04e-14!113;UBERON:0003075!4.46e-14!86;UBERON:0007284!4.46e-14!86;UBERON:0004535!2.61e-13!110;UBERON:0004872!8.88e-13!84;UBERON:0002049!3.70e-12!79;UBERON:0007798!3.70e-12!79;UBERON:0001049!3.83e-12!57;UBERON:0005068!3.83e-12!57;UBERON:0006241!3.83e-12!57;UBERON:0007135!3.83e-12!57;UBERON:0001981!3.95e-12!60;UBERON:0007500!3.95e-12!60;UBERON:0004537!3.95e-12!60;UBERON:0006965!3.95e-12!60;UBERON:0000475!4.31e-12!365;UBERON:0003914!7.84e-12!118;UBERON:0000055!1.08e-11!69;UBERON:0002346!1.12e-11!90;UBERON:0002616!3.52e-11!59;UBERON:0000481!3.80e-11!347;UBERON:0002204!8.22e-11!167;UBERON:0000955!1.08e-10!69;UBERON:0006238!1.08e-10!69;UBERON:0000479!1.05e-09!787;UBERON:0004290!1.53e-09!70;UBERON:0000033!1.59e-09!123;UBERON:0002385!1.85e-09!63;UBERON:0001015!1.85e-09!63;UBERON:0000383!1.85e-09!63;UBERON:0001134!2.28e-09!61;UBERON:0002036!2.28e-09!61;UBERON:0003082!2.28e-09!61;UBERON:0005256!3.55e-09!143;UBERON:0000914!3.63e-09!83;UBERON:0002329!3.63e-09!83;UBERON:0003077!3.63e-09!83;UBERON:0003059!3.63e-09!83;UBERON:0007282!3.63e-09!83;UBERON:0009618!3.63e-09!83;UBERON:0007285!3.63e-09!83;UBERON:0003056!3.84e-09!61;UBERON:0001017!4.30e-09!82;UBERON:0005743!5.95e-09!86;UBERON:0000153!6.60e-09!129;UBERON:0007811!6.60e-09!129;UBERON:0001637!7.07e-09!42;UBERON:0003509!7.07e-09!42;UBERON:0004572!7.07e-09!42;UBERON:0000926!1.13e-08!448;UBERON:0004120!1.13e-08!448;UBERON:0006603!1.13e-08!448;UBERON:0000062!1.14e-08!511;UBERON:0003080!1.24e-08!42;UBERON:0000486!1.39e-08!82;UBERON:0002780!3.60e-08!41;UBERON:0001890!3.60e-08!41;UBERON:0006240!3.60e-08!41;UBERON:0004121!4.96e-08!169;UBERON:0000073!1.37e-07!94;UBERON:0001016!1.37e-07!94;UBERON:0003103!2.23e-07!69;UBERON:0001869!3.75e-07!32;UBERON:0007100!4.44e-07!27;UBERON:0002020!5.27e-07!34;UBERON:0003528!5.27e-07!34;UBERON:0000924!7.50e-07!173;UBERON:0006601!7.50e-07!173;UBERON:0001893!7.52e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;6.30e-07;25 | |||
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| |||
|short_description=p1@PRKACA | |||
}} |
Latest revision as of 03:50, 16 September 2015
Short description: | p1@PRKACA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRKACA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000308677, ENST00000535695, NM_002730, uc002myc.2_5end |
EntrezGene: | PRKACA |
HGNC: | 9380 |
UniProt: | P17612 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.93e-11 | 121 |
muscle precursor cell | 4.77e-08 | 58 |
myoblast | 4.77e-08 | 58 |
multi-potent skeletal muscle stem cell | 4.77e-08 | 58 |
muscle cell | 6.92e-08 | 55 |
smooth muscle cell | 2.04e-07 | 43 |
smooth muscle myoblast | 2.04e-07 | 43 |
endothelial cell | 2.09e-07 | 36 |
meso-epithelial cell | 7.46e-07 | 45 |