FFCP PHASE1:Hg19::chr4:158141994..158142006,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:158141994..158142006,+ to FFCP PHASE1:Hg19::chr4:158141994..158142006,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2891 | |EntrezGene=2891 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4572 | |HGNC=4572 | ||
|TSSclassifier=strong | |||
|UniProt=D6RFM6 | |UniProt=D6RFM6 | ||
|association_with_transcript=35bp_to_ENST00000506284_5end | |||
|cluster_id=chr4:158141994..158142006,+ | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_9_at_GRIA2_5end | |||
|id=chr4:158141994..158142006,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.11e-26;3!UBERON:0006601;3.33e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.89e-101!57;UBERON:0005068!3.89e-101!57;UBERON:0006241!3.89e-101!57;UBERON:0007135!3.89e-101!57;UBERON:0002616!3.27e-88!59;UBERON:0001017!1.01e-87!82;UBERON:0005743!1.13e-86!86;UBERON:0002780!1.21e-83!41;UBERON:0001890!1.21e-83!41;UBERON:0006240!1.21e-83!41;UBERON:0003080!1.74e-81!42;UBERON:0002020!3.46e-79!34;UBERON:0003528!3.46e-79!34;UBERON:0001893!6.11e-79!34;UBERON:0000073!1.58e-77!94;UBERON:0001016!1.58e-77!94;UBERON:0000955!9.66e-77!69;UBERON:0006238!9.66e-77!69;UBERON:0003075!9.98e-77!86;UBERON:0007284!9.98e-77!86;UBERON:0002791!7.28e-76!33;UBERON:0001869!2.25e-73!32;UBERON:0002346!7.59e-73!90;UBERON:0002619!4.69e-66!22;UBERON:0001950!8.14e-60!20;UBERON:0000956!1.01e-57!25;UBERON:0000203!1.01e-57!25;UBERON:0007023!1.06e-57!115;UBERON:0003056!5.61e-57!61;UBERON:0000033!3.15e-43!123;UBERON:0004121!3.68e-42!169;UBERON:0000924!6.31e-41!173;UBERON:0006601!6.31e-41!173;UBERON:0000153!9.74e-41!129;UBERON:0007811!9.74e-41!129;UBERON:0000025!7.09e-28!194;UBERON:0002420!8.50e-23!9;UBERON:0007245!8.50e-23!9;UBERON:0010009!8.50e-23!9;UBERON:0010011!8.50e-23!9;UBERON:0000454!8.50e-23!9;UBERON:0002308!2.53e-22!9;UBERON:0000125!2.53e-22!9;UBERON:0000200!1.32e-20!6;UBERON:0004111!3.14e-20!241;UBERON:0001871!3.78e-20!7;UBERON:0003076!5.20e-20!15;UBERON:0003057!5.20e-20!15;UBERON:0001872!3.93e-17!5;UBERON:0000349!4.34e-17!5;UBERON:0000483!6.99e-17!309;UBERON:0002021!1.13e-16!5;UBERON:0000119!1.32e-16!312;UBERON:0009663!1.47e-16!7;UBERON:0004733!2.13e-16!12;UBERON:0002028!2.13e-16!12;UBERON:0007277!2.13e-16!12;UBERON:0000477!2.75e-16!286;UBERON:0000064!3.04e-15!219;UBERON:0004732!5.00e-15!13;UBERON:0002298!1.10e-13!8;UBERON:0002680!6.19e-13!9;UBERON:0001895!6.19e-13!9;UBERON:0010092!6.19e-13!9;UBERON:0002771!2.06e-11!3;UBERON:0000475!5.83e-11!365;UBERON:0006331!2.19e-10!3;UBERON:0000988!4.29e-10!3;UBERON:0000369!3.40e-08!4;UBERON:0002435!3.40e-08!4;UBERON:0000204!3.40e-08!4;UBERON:0010082!3.40e-08!4;UBERON:0001876!4.07e-08!2;UBERON:0001870!4.67e-08!2;UBERON:0001954!8.31e-08!2;UBERON:0003022!8.31e-08!2;UBERON:0002421!8.31e-08!2;UBERON:0002600!8.31e-08!2;UBERON:0002148!1.46e-07!2;UBERON:0009662!1.46e-07!2;UBERON:0001897!1.51e-07!2;UBERON:0001875!1.56e-07!2;UBERON:0006514!1.56e-07!2;UBERON:0001894!1.56e-07!7;UBERON:0006222!1.56e-07!7;UBERON:0000481!2.87e-07!347;UBERON:0002360!3.51e-07!2;UBERON:0000094!3.51e-07!2;UBERON:0007645!3.51e-07!2;UBERON:0000062!3.76e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.16e-59;22!UBERON:0001869;3.27e-56;32!UBERON:0002791;4.58e-56;32!UBERON:0001950;3.67e-55;20!UBERON:0000956;3.74e-52;25!UBERON:0000203;3.74e-52;25!UBERON:0001893;1.36e-51;34!UBERON:0003528;1.46e-51;34!UBERON:0002020;1.46e-51;34!UBERON:0002780;7.10e-38;41!UBERON:0001890;7.10e-38;41!UBERON:0000073;4.33e-32;53!UBERON:0002616;4.33e-32;53!UBERON:0000955;6.84e-26;68!UBERON:0001870;2.50e-25;3!UBERON:0002420;5.04e-23;9!UBERON:0007245;5.04e-23;9!UBERON:0010009;5.04e-23;9!UBERON:0010011;5.04e-23;9!UBERON:0000454;5.04e-23;9!UBERON:0000200;1.43e-22;6!UBERON:0001017;1.62e-22;75!UBERON:0001871;1.23e-19;6!UBERON:0001016;1.08e-18;83!UBERON:0002771;5.04e-18;2!UBERON:0001876;6.24e-18;2!UBERON:0002702;1.72e-17;2!UBERON:0000349;5.19e-16;5!UBERON:0001872;1.13e-15;5!UBERON:0002037;3.42e-13;6!UBERON:0005383;5.56e-12;3!UBERON:0005382;5.56e-12;3!UBERON:0009663;3.35e-11;7!UBERON:0001874;1.30e-09;1!UBERON:0003112;1.30e-09;1!UBERON:0011158;1.30e-09;1!UBERON:0003128;1.30e-09;1!UBERON:0001703;1.30e-09;1!UBERON:0002241;1.30e-09;1!UBERON:0011216;2.77e-09;132!UBERON:0000369;3.29e-09;4!UBERON:0002435;3.29e-09;4!UBERON:0000204;3.29e-09;4!UBERON:0002680;5.74e-09;9!UBERON:0001895;5.74e-09;9!UBERON:0000125;7.95e-09;9!UBERON:0002308;7.95e-09;9!UBERON:0002021;1.11e-07;5!UBERON:0004733;7.70e-07;12!UBERON:0002028;7.70e-07;12!UBERON:0007023;8.92e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002791,9.04e-62,32;UBERON:0001869,9.04e-62,32;UBERON:0001049,4.20e-61,56;UBERON:0005068,4.20e-61,56;UBERON:0006241,4.20e-61,56;UBERON:0007135,4.20e-61,56;UBERON:0002619,4.36e-59,22;UBERON:0000073,1.72e-58,53;UBERON:0002616,1.72e-58,53;UBERON:0003528,4.31e-58,34;UBERON:0002020,4.31e-58,34;UBERON:0001893,4.31e-58,34;UBERON:0001950,5.08e-55,20;UBERON:0002780,2.28e-54,41;UBERON:0001890,2.28e-54,41;UBERON:0003080,2.28e-54,41;UBERON:0006240,2.28e-54,41;UBERON:0000956,4.98e-52,25;UBERON:0000203,4.98e-52,25;UBERON:0000955,2.08e-44,68;UBERON:0006238,2.08e-44,68;UBERON:0001017,5.82e-41,81;UBERON:0003075,5.82e-41,82;UBERON:0007284,5.82e-41,82;UBERON:0002346,6.27e-39,86;UBERON:0001016,1.23e-36,89;UBERON:0003056,6.35e-36,61;UBERON:0010371,1.08e-31,104;UBERON:0010314,6.03e-27,132;UBERON:0001870,1.58e-25,3;UBERON:0007023,2.58e-23,114;UBERON:0002420,5.96e-23,9;UBERON:0007245,5.96e-23,9;UBERON:0010009,5.96e-23,9;UBERON:0010011,5.96e-23,9;UBERON:0000454,5.96e-23,9;UBERON:0000200,9.43e-23,6;UBERON:0001871,1.68e-19,6;UBERON:0002771,5.75e-18,2;UBERON:0002702,8.08e-18,2;UBERON:0004121,8.70e-18,171;UBERON:0000924,8.70e-18,171;UBERON:0006601,8.70e-18,171;UBERON:0001876,9.58e-18,2;UBERON:0011216,5.60e-16,223;UBERON:0000349,6.70e-16,5;UBERON:0000025,1.07e-15,192;UBERON:0001872,1.35e-15,5;UBERON:0002037,2.96e-13,6;UBERON:0006215,2.96e-13,6;UBERON:0004111,7.19e-12,240;UBERON:0005383,7.78e-12,3;UBERON:0005382,7.78e-12,3;UBERON:0009663,3.18e-11,7;UBERON:0001874,1.15e-09,1;UBERON:0003112,1.25e-09,1;UBERON:0011158,1.25e-09,1;UBERON:0003128,1.25e-09,1;UBERON:0001703,1.25e-09,1;UBERON:0002241,1.25e-09,1;UBERON:0004761,1.25e-09,1;UBERON:0009617,1.25e-09,1;UBERON:0003076,3.71e-09,15;UBERON:0003057,3.71e-09,15;UBERON:0000369,4.23e-09,4;UBERON:0002435,4.23e-09,4;UBERON:0000204,4.23e-09,4;UBERON:0010082,4.23e-09,4;UBERON:0002680,5.23e-09,9;UBERON:0001895,5.23e-09,9;UBERON:0010092,5.23e-09,9;UBERON:0000125,7.65e-09,9;UBERON:0002308,7.65e-09,9;UBERON:0000483,1.52e-08,306;UBERON:0000119,1.99e-08,309;UBERON:0002021,1.19e-07,5;UBERON:0004733,7.19e-07,12;UBERON:0002028,7.19e-07,12;UBERON:0007277,7.19e-07,12 | |||
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|short_description=p9@GRIA2 | |||
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Latest revision as of 09:33, 16 September 2015
Short description: | p9@GRIA2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_GRIA2_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | 35bp_to_ENST00000506284_5end |
EntrezGene: | GRIA2 |
HGNC: | 4572 |
UniProt: | D6RFM6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data