FFCP PHASE1:Hg19::chr4:160188990..160189002,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9693 | |EntrezGene=9693 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16854 | |HGNC=16854 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y4G8 | |UniProt=Q9Y4G8 | ||
|association_with_transcript=0bp_to_NM_014247,uc003iqg.3_5end | |association_with_transcript=0bp_to_NM_014247,uc003iqg.3_5end | ||
|cluster_id=chr4:160188990..160189002,+ | |||
|coexpression_cluster_id=C185 | |||
|description=CAGE_peak_16_at_RAPGEF2_5end | |description=CAGE_peak_16_at_RAPGEF2_5end | ||
|id=chr4:160188990..160189002,+ | |id=chr4:160188990..160189002,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;7.82e-07;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;7.87e-13;1!UBERON:0006222;2.07e-12;1!UBERON:0006601;2.77e-11;82!UBERON:0010122;7.82e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.11e-75!57;UBERON:0005068!1.11e-75!57;UBERON:0006241!1.11e-75!57;UBERON:0007135!1.11e-75!57;UBERON:0002616!5.97e-69!59;UBERON:0000073!3.73e-66!94;UBERON:0001016!3.73e-66!94;UBERON:0001017!1.23e-65!82;UBERON:0002780!4.82e-65!41;UBERON:0001890!4.82e-65!41;UBERON:0006240!4.82e-65!41;UBERON:0005743!7.14e-65!86;UBERON:0003080!2.64e-63!42;UBERON:0000955!1.02e-62!69;UBERON:0006238!1.02e-62!69;UBERON:0003075!9.88e-57!86;UBERON:0007284!9.88e-57!86;UBERON:0001893!1.51e-56!34;UBERON:0002020!3.40e-56!34;UBERON:0003528!3.40e-56!34;UBERON:0002791!7.70e-54!33;UBERON:0002346!1.11e-53!90;UBERON:0001869!1.29e-51!32;UBERON:0003056!2.74e-46!61;UBERON:0007023!8.80e-40!115;UBERON:0000033!9.97e-36!123;UBERON:0000956!8.22e-35!25;UBERON:0000203!8.22e-35!25;UBERON:0004121!2.51e-34!169;UBERON:0000153!1.60e-33!129;UBERON:0007811!1.60e-33!129;UBERON:0000924!3.13e-33!173;UBERON:0006601!3.13e-33!173;UBERON:0002619!5.60e-32!22;UBERON:0001950!2.88e-31!20;UBERON:0002308!9.78e-24!9;UBERON:0000125!9.78e-24!9;UBERON:0002420!1.13e-18!9;UBERON:0007245!1.13e-18!9;UBERON:0010009!1.13e-18!9;UBERON:0010011!1.13e-18!9;UBERON:0000454!1.13e-18!9;UBERON:0009663!1.15e-18!7;UBERON:0002298!8.93e-17!8;UBERON:0001871!9.15e-17!7;UBERON:0000025!1.74e-16!194;UBERON:0004732!3.52e-16!13;UBERON:0004733!9.16e-14!12;UBERON:0002028!9.16e-14!12;UBERON:0007277!9.16e-14!12;UBERON:0003076!1.28e-13!15;UBERON:0003057!1.28e-13!15;UBERON:0000064!4.91e-13!219;UBERON:0000200!3.43e-12!6;UBERON:0000369!5.41e-12!4;UBERON:0002435!5.41e-12!4;UBERON:0000204!5.41e-12!4;UBERON:0010082!5.41e-12!4;UBERON:0004111!3.98e-11!241;UBERON:0001894!9.05e-10!7;UBERON:0006222!9.05e-10!7;UBERON:0000477!1.38e-09!286;UBERON:0000988!1.44e-09!3;UBERON:0002771!2.46e-09!3;UBERON:0005383!2.99e-09!3;UBERON:0005382!2.99e-09!3;UBERON:0001896!3.25e-09!3;UBERON:0005290!3.25e-09!3;UBERON:0010096!3.25e-09!3;UBERON:0002021!3.68e-09!5;UBERON:0006331!4.79e-09!3;UBERON:0000483!1.18e-08!309;UBERON:0000119!1.83e-08!312;UBERON:0000475!3.51e-08!365;UBERON:0002680!1.52e-07!9;UBERON:0001895!1.52e-07!9;UBERON:0010092!1.52e-07!9;UBERON:0005162!3.04e-07!2;UBERON:0000122!3.04e-07!2;UBERON:0001873!7.89e-07!2;UBERON:0010122!7.89e-07!2;UBERON:0000481!8.73e-07!347;UBERON:0002148!9.36e-07!2;UBERON:0009662!9.36e-07!2 | |ontology_enrichment_uberon=UBERON:0001049!1.11e-75!57;UBERON:0005068!1.11e-75!57;UBERON:0006241!1.11e-75!57;UBERON:0007135!1.11e-75!57;UBERON:0002616!5.97e-69!59;UBERON:0000073!3.73e-66!94;UBERON:0001016!3.73e-66!94;UBERON:0001017!1.23e-65!82;UBERON:0002780!4.82e-65!41;UBERON:0001890!4.82e-65!41;UBERON:0006240!4.82e-65!41;UBERON:0005743!7.14e-65!86;UBERON:0003080!2.64e-63!42;UBERON:0000955!1.02e-62!69;UBERON:0006238!1.02e-62!69;UBERON:0003075!9.88e-57!86;UBERON:0007284!9.88e-57!86;UBERON:0001893!1.51e-56!34;UBERON:0002020!3.40e-56!34;UBERON:0003528!3.40e-56!34;UBERON:0002791!7.70e-54!33;UBERON:0002346!1.11e-53!90;UBERON:0001869!1.29e-51!32;UBERON:0003056!2.74e-46!61;UBERON:0007023!8.80e-40!115;UBERON:0000033!9.97e-36!123;UBERON:0000956!8.22e-35!25;UBERON:0000203!8.22e-35!25;UBERON:0004121!2.51e-34!169;UBERON:0000153!1.60e-33!129;UBERON:0007811!1.60e-33!129;UBERON:0000924!3.13e-33!173;UBERON:0006601!3.13e-33!173;UBERON:0002619!5.60e-32!22;UBERON:0001950!2.88e-31!20;UBERON:0002308!9.78e-24!9;UBERON:0000125!9.78e-24!9;UBERON:0002420!1.13e-18!9;UBERON:0007245!1.13e-18!9;UBERON:0010009!1.13e-18!9;UBERON:0010011!1.13e-18!9;UBERON:0000454!1.13e-18!9;UBERON:0009663!1.15e-18!7;UBERON:0002298!8.93e-17!8;UBERON:0001871!9.15e-17!7;UBERON:0000025!1.74e-16!194;UBERON:0004732!3.52e-16!13;UBERON:0004733!9.16e-14!12;UBERON:0002028!9.16e-14!12;UBERON:0007277!9.16e-14!12;UBERON:0003076!1.28e-13!15;UBERON:0003057!1.28e-13!15;UBERON:0000064!4.91e-13!219;UBERON:0000200!3.43e-12!6;UBERON:0000369!5.41e-12!4;UBERON:0002435!5.41e-12!4;UBERON:0000204!5.41e-12!4;UBERON:0010082!5.41e-12!4;UBERON:0004111!3.98e-11!241;UBERON:0001894!9.05e-10!7;UBERON:0006222!9.05e-10!7;UBERON:0000477!1.38e-09!286;UBERON:0000988!1.44e-09!3;UBERON:0002771!2.46e-09!3;UBERON:0005383!2.99e-09!3;UBERON:0005382!2.99e-09!3;UBERON:0001896!3.25e-09!3;UBERON:0005290!3.25e-09!3;UBERON:0010096!3.25e-09!3;UBERON:0002021!3.68e-09!5;UBERON:0006331!4.79e-09!3;UBERON:0000483!1.18e-08!309;UBERON:0000119!1.83e-08!312;UBERON:0000475!3.51e-08!365;UBERON:0002680!1.52e-07!9;UBERON:0001895!1.52e-07!9;UBERON:0010092!1.52e-07!9;UBERON:0005162!3.04e-07!2;UBERON:0000122!3.04e-07!2;UBERON:0001873!7.89e-07!2;UBERON:0010122!7.89e-07!2;UBERON:0000481!8.73e-07!347;UBERON:0002148!9.36e-07!2;UBERON:0009662!9.36e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.03e-32;34!UBERON:0001869;4.26e-30;32!UBERON:0002791;3.27e-26;32!UBERON:0002780;7.75e-26;41!UBERON:0001890;7.75e-26;41!UBERON:0001950;4.49e-25;20!UBERON:0005162;1.87e-23;2!UBERON:0000122;1.87e-23;2!UBERON:0002619;7.55e-23;22!UBERON:0003528;7.12e-22;34!UBERON:0002020;7.12e-22;34!UBERON:0000073;7.94e-21;53!UBERON:0002616;7.94e-21;53!UBERON:0000956;3.77e-20;25!UBERON:0000203;3.77e-20;25!UBERON:0001017;2.16e-15;75!UBERON:0001016;5.93e-14;83!UBERON:0000941;7.87e-13;1!UBERON:0001785;7.87e-13;1!UBERON:0002464;7.87e-13;1!UBERON:0004904;7.87e-13;1!UBERON:0001021;7.87e-13;1!UBERON:0001882;2.07e-12;1!UBERON:0002022;2.07e-12;1!UBERON:0002336;2.07e-12;1!UBERON:0011215;2.07e-12;1!UBERON:0001018;2.07e-12;1!UBERON:0002473;2.07e-12;1!UBERON:0005340;2.07e-12;1!UBERON:0003544;2.07e-12;1!UBERON:0005970;2.07e-12;1!UBERON:0002316;2.07e-12;1!UBERON:0001020;2.07e-12;1!UBERON:0007190;2.07e-12;1!UBERON:0005403;2.07e-12;1!UBERON:0002437;2.07e-12;1!UBERON:0000369;5.09e-12;4!UBERON:0002435;5.09e-12;4!UBERON:0000204;5.09e-12;4!UBERON:0000955;1.64e-11;68!UBERON:0007023;1.83e-11;114!UBERON:0001872;8.48e-10;5!UBERON:0004732;2.54e-08;13!UBERON:0000200;2.61e-08;6!UBERON:0002298;2.61e-08;6!UBERON:0001871;3.04e-07;6!UBERON:0009663;3.04e-07;7!UBERON:0003714;4.82e-07;2!UBERON:0002771;7.82e-07;2!UBERON:0001873;7.82e-07;2 | |||
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|short_description=p16@RAPGEF2 | |short_description=p16@RAPGEF2 | ||
}} | }} |
Latest revision as of 12:30, 16 September 2015
Short description: | p16@RAPGEF2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_RAPGEF2_5end |
Coexpression cluster: | C185_small_adrenal_gastric_Mesenchymal_acute_HES3GFP_testis |
Association with transcript: | 0bp_to_NM_014247, uc003iqg.3_5end |
EntrezGene: | RAPGEF2 |
HGNC: | 16854 |
UniProt: | Q9Y4G8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data