FFCP PHASE1:Hg19::chr3:164913561..164913586,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:164913561..164913586,- to FFCP PHASE1:Hg19::chr3:164913561..164913586,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22865 | |EntrezGene=22865 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23501 | |HGNC=23501 | ||
|TSSclassifier=strong | |||
|UniProt=O94933 | |UniProt=O94933 | ||
|association_with_transcript=203bp_to_ENST00000475390,uc003fej.3_5end | |||
|cluster_id=chr3:164913561..164913586,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_8_at_SLITRK3_5end | |||
|id=chr3:164913561..164913586,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.34e-30;3!UBERON:0006601;1.71e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.05e-82!57;UBERON:0005068!5.05e-82!57;UBERON:0006241!5.05e-82!57;UBERON:0007135!5.05e-82!57;UBERON:0000955!5.41e-73!69;UBERON:0006238!5.41e-73!69;UBERON:0001017!9.18e-73!82;UBERON:0002616!5.86e-71!59;UBERON:0005743!6.19e-69!86;UBERON:0000073!1.49e-64!94;UBERON:0001016!1.49e-64!94;UBERON:0001893!8.84e-64!34;UBERON:0002020!1.70e-63!34;UBERON:0003528!1.70e-63!34;UBERON:0001869!3.19e-63!32;UBERON:0002791!8.28e-61!33;UBERON:0002619!4.52e-60!22;UBERON:0002780!4.69e-60!41;UBERON:0001890!4.69e-60!41;UBERON:0006240!4.69e-60!41;UBERON:0003080!1.80e-58!42;UBERON:0003075!9.09e-57!86;UBERON:0007284!9.09e-57!86;UBERON:0002346!1.47e-56!90;UBERON:0007023!2.05e-54!115;UBERON:0001950!4.82e-54!20;UBERON:0000956!1.87e-52!25;UBERON:0000203!1.87e-52!25;UBERON:0000033!4.56e-43!123;UBERON:0003056!8.21e-41!61;UBERON:0000153!1.41e-40!129;UBERON:0007811!1.41e-40!129;UBERON:0000924!1.63e-33!173;UBERON:0006601!1.63e-33!173;UBERON:0004121!6.27e-33!169;UBERON:0003076!1.55e-23!15;UBERON:0003057!1.55e-23!15;UBERON:0004733!2.98e-20!12;UBERON:0002028!2.98e-20!12;UBERON:0007277!2.98e-20!12;UBERON:0000200!3.21e-20!6;UBERON:0001871!8.59e-20!7;UBERON:0004732!1.47e-18!13;UBERON:0000025!3.05e-18!194;UBERON:0002021!7.70e-17!5;UBERON:0000349!7.96e-17!5;UBERON:0000369!4.24e-14!4;UBERON:0002435!4.24e-14!4;UBERON:0000204!4.24e-14!4;UBERON:0010082!4.24e-14!4;UBERON:0004111!1.27e-13!241;UBERON:0002298!1.63e-13!8;UBERON:0002420!4.17e-13!9;UBERON:0007245!4.17e-13!9;UBERON:0010009!4.17e-13!9;UBERON:0010011!4.17e-13!9;UBERON:0000454!4.17e-13!9;UBERON:0000064!5.33e-13!219;UBERON:0002308!1.12e-12!9;UBERON:0000125!1.12e-12!9;UBERON:0002680!1.53e-12!9;UBERON:0001895!1.53e-12!9;UBERON:0010092!1.53e-12!9;UBERON:0000477!3.37e-12!286;UBERON:0001872!1.11e-11!5;UBERON:0002771!5.74e-11!3;UBERON:0005383!7.23e-11!3;UBERON:0005382!7.23e-11!3;UBERON:0000475!1.02e-10!365;UBERON:0001896!3.76e-10!3;UBERON:0005290!3.76e-10!3;UBERON:0010096!3.76e-10!3;UBERON:0000988!8.51e-10!3;UBERON:0000483!4.19e-09!309;UBERON:0000119!6.38e-09!312;UBERON:0000481!9.44e-09!347;UBERON:0009663!4.80e-08!7;UBERON:0001870!9.24e-08!2;UBERON:0001876!1.20e-07!2;UBERON:0001873!1.20e-07!2;UBERON:0010122!1.20e-07!2;UBERON:0001954!1.24e-07!2;UBERON:0003022!1.24e-07!2;UBERON:0002421!1.24e-07!2;UBERON:0002600!1.24e-07!2;UBERON:0000062!2.51e-07!511;UBERON:0000922!3.58e-07!612;UBERON:0002148!5.42e-07!2;UBERON:0009662!5.42e-07!2;UBERON:0000923!7.68e-07!604;UBERON:0005291!7.68e-07!604;UBERON:0006598!7.68e-07!604;UBERON:0002532!7.68e-07!604;UBERON:0002050!8.30e-07!605;UBERON:0005423!8.30e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.98e-61;22!UBERON:0001869;1.32e-59;32!UBERON:0001893;3.04e-57;34!UBERON:0001950;3.90e-56;20!UBERON:0000956;1.27e-53;25!UBERON:0000203;1.27e-53;25!UBERON:0002791;9.38e-53;32!UBERON:0003528;1.91e-47;34!UBERON:0002020;1.91e-47;34!UBERON:0002780;1.04e-33;41!UBERON:0001890;1.04e-33;41!UBERON:0001872;9.35e-33;5!UBERON:0000073;4.27e-30;53!UBERON:0002616;4.27e-30;53!UBERON:0000955;6.13e-27;68!UBERON:0001017;4.50e-23;75!UBERON:0001016;1.61e-20;83!UBERON:0002021;1.06e-18;5!UBERON:0000349;2.11e-18;5!UBERON:0000200;7.10e-16;6!UBERON:0002037;1.93e-15;6!UBERON:0002581;1.24e-11;1!UBERON:0002902;2.96e-11;1!UBERON:0001882;2.96e-11;1!UBERON:0002022;2.96e-11;1!UBERON:0001874;2.96e-11;1!UBERON:0009899;2.96e-11;1!UBERON:0007190;2.96e-11;1!UBERON:0005403;2.96e-11;1!UBERON:0000369;7.34e-11;4!UBERON:0002435;7.34e-11;4!UBERON:0000204;7.34e-11;4!UBERON:0002680;1.74e-10;9!UBERON:0002420;1.74e-10;9!UBERON:0007245;1.74e-10;9!UBERON:0010009;1.74e-10;9!UBERON:0001895;1.74e-10;9!UBERON:0010011;1.74e-10;9!UBERON:0000454;1.74e-10;9!UBERON:0007023;9.88e-10;114!UBERON:0011216;2.86e-08;132!UBERON:0004733;5.42e-08;12!UBERON:0002028;5.42e-08;12!UBERON:0004732;2.05e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.44e-65,32;UBERON:0001893,1.05e-61,34;UBERON:0002619,1.30e-60,22;UBERON:0002791,3.64e-57,32;UBERON:0000073,4.84e-57,53;UBERON:0002616,4.84e-57,53;UBERON:0001950,6.34e-56,20;UBERON:0000955,3.17e-54,68;UBERON:0006238,3.17e-54,68;UBERON:0001049,6.43e-54,56;UBERON:0005068,6.43e-54,56;UBERON:0006241,6.43e-54,56;UBERON:0007135,6.43e-54,56;UBERON:0003528,8.67e-54,34;UBERON:0002020,8.67e-54,34;UBERON:0000956,1.95e-53,25;UBERON:0000203,1.95e-53,25;UBERON:0002780,4.43e-51,41;UBERON:0001890,4.43e-51,41;UBERON:0003080,4.43e-51,41;UBERON:0006240,4.43e-51,41;UBERON:0001017,2.33e-45,81;UBERON:0001016,1.10e-40,89;UBERON:0003075,2.73e-36,82;UBERON:0007284,2.73e-36,82;UBERON:0002346,1.64e-34,86;UBERON:0003056,6.37e-34,61;UBERON:0001872,1.53e-32,5;UBERON:0007023,6.09e-29,114;UBERON:0010371,3.54e-28,104;UBERON:0010314,1.01e-21,132;UBERON:0004121,2.53e-20,171;UBERON:0000924,2.53e-20,171;UBERON:0006601,2.53e-20,171;UBERON:0000349,1.09e-18,5;UBERON:0002021,1.48e-18,5;UBERON:0000200,1.06e-15,6;UBERON:0002037,2.24e-15,6;UBERON:0006215,2.24e-15,6;UBERON:0011216,5.87e-15,223;UBERON:0000025,3.65e-14,192;UBERON:0002581,1.31e-11,1;UBERON:0001882,1.60e-11,1;UBERON:0005403,1.60e-11,1;UBERON:0001874,1.97e-11,1;UBERON:0002022,2.68e-11,1;UBERON:0002902,4.44e-11,1;UBERON:0009899,4.44e-11,1;UBERON:0000369,4.45e-11,4;UBERON:0002435,4.45e-11,4;UBERON:0000204,4.45e-11,4;UBERON:0010082,4.45e-11,4;UBERON:0007190,6.00e-11,1;UBERON:0004111,8.28e-11,240;UBERON:0002420,1.06e-10,9;UBERON:0007245,1.06e-10,9;UBERON:0010009,1.06e-10,9;UBERON:0010011,1.06e-10,9;UBERON:0000454,1.06e-10,9;UBERON:0002680,1.92e-10,9;UBERON:0001895,1.92e-10,9;UBERON:0010092,1.92e-10,9;UBERON:0004733,5.83e-08,12;UBERON:0002028,5.83e-08,12;UBERON:0007277,5.83e-08,12;UBERON:0000483,6.88e-08,306;UBERON:0000119,8.73e-08,309;UBERON:0004732,2.19e-07,13;UBERON:0001871,9.12e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0.969332746095218,1.76259386507517,1.99613798001194,0,0,0,0,0,0,0,0,0,0.885741385813839,0.964771509003264,1.52581736317083,1.3269511191747,1.77328571372128,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.202203398942031,0,0.468528891450678,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,1.39283751102933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,1.59045937961861,0.408610218334727,0,0.137539436597234,0,0,0,1.64023802976667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0.886068179966986,4.02686674176478,0.876336514945499,0.573409195690071,0.221858103073705,0.683060432355218,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.943595651135378,0,0.169732529954025,0,0,0,0,0,0,0,0,1.99110597799025,4.25089728976755,0.798169295285756,1.43581454968528,0.252071696221718,1.38314504928436,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14813893851271,3.12431239445539,2.68692835451539,1.26831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.40781839786099,2.30204707469972,0,0,0,1.88538707899202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0.196308467114945,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.951880862672806,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0.969332746095218,1.76259386507517,1.99613798001194,0,0,0,0,0,0,0,0,0,0.885741385813839,0.964771509003264,1.52581736317083,1.3269511191747,1.77328571372128,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.202203398942031,0,0.468528891450678,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,1.39283751102933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,1.59045937961861,0.408610218334727,0,0.137539436597234,0,0,0,1.64023802976667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0.886068179966986,4.02686674176478,0.876336514945499,0.573409195690071,0.221858103073705,0.683060432355218,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.943595651135378,0,0.169732529954025,0,0,0,0,0,0,0,0,1.99110597799025,4.25089728976755,0.798169295285756,1.43581454968528,0.252071696221718,1.38314504928436,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14813893851271,3.12431239445539,2.68692835451539,1.26831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.40781839786099,2.30204707469972,0,0,0,1.88538707899202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0.196308467114945,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.951880862672806,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p8@SLITRK3 | |||
}} | }} |
Latest revision as of 12:34, 16 September 2015
Short description: | p8@SLITRK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SLITRK3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 203bp_to_ENST00000475390, uc003fej.3_5end |
EntrezGene: | SLITRK3 |
HGNC: | 23501 |
UniProt: | O94933 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data