FFCP PHASE1:Hg19::chr2:24714729..24714761,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8648 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7668 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-21bp_to_ENST00000496333_5end | |||
|cluster_id=chr2:24714729..24714761,+ | |||
|coexpression_cluster_id=C134 | |||
|description=CAGE_peak_1_at_NCOA1_5end | |||
|id=chr2:24714729..24714761,+ | |||
|ontology_enrichment_celltype=CL:0000766!3.11e-20!76;CL:0000738!1.12e-18!140;CL:0002057!9.84e-18!42;CL:0000557!8.71e-16!71;CL:0000860!2.46e-15!45;CL:0000839!1.94e-14!70;CL:0000037!1.09e-13!172;CL:0000566!1.09e-13!172;CL:0002194!1.38e-13!63;CL:0000576!1.38e-13!63;CL:0000040!1.38e-13!63;CL:0000559!1.38e-13!63;CL:0000988!1.55e-13!182;CL:0002009!2.67e-13!65;CL:0002087!3.53e-13!119;CL:0002031!5.64e-13!124;CL:0002032!3.23e-12!165;CL:0000837!3.23e-12!165;CL:0000763!1.08e-11!112;CL:0000049!1.08e-11!112;CL:0000094!4.83e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.30e-12;33!CL:0002057;2.30e-12;33!CL:0000094;7.57e-11;8!CL:0000473;1.71e-10;39!CL:0000234;1.71e-10;39!CL:0000766;9.00e-10;69!CL:0000576;5.49e-09;48!CL:0000081;2.52e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.30e-19,72;CL:0000860,3.07e-15,42;CL:0002057,3.07e-15,42;CL:0000473,1.81e-14,48;CL:0000234,1.81e-14,48;CL:0000738,3.80e-14,136;CL:0000557,4.20e-13,67;CL:0000839,2.48e-12,66;CL:0002194,9.59e-12,59;CL:0000576,9.59e-12,59;CL:0000040,9.59e-12,59;CL:0000559,9.59e-12,59;CL:0002009,4.52e-11,61;CL:0000094,5.07e-11,8;CL:0000763,2.19e-10,108;CL:0000049,2.19e-10,108;CL:0000037,1.14e-09,168;CL:0000988,1.66e-09,177;CL:0002032,1.72e-08,161;CL:0000837,1.72e-08,161;CL:0002087,1.75e-08,115;CL:0002031,1.78e-08,120;CL:0000081,1.91e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.52e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.02e-31!115;UBERON:0001049!3.92e-23!57;UBERON:0005068!3.92e-23!57;UBERON:0006241!3.92e-23!57;UBERON:0007135!3.92e-23!57;UBERON:0002616!2.65e-21!59;UBERON:0000955!2.05e-20!69;UBERON:0006238!2.05e-20!69;UBERON:0001017!8.25e-20!82;UBERON:0002780!1.82e-19!41;UBERON:0001890!1.82e-19!41;UBERON:0006240!1.82e-19!41;UBERON:0000073!1.83e-19!94;UBERON:0001016!1.83e-19!94;UBERON:0005743!2.39e-19!86;UBERON:0003080!1.46e-18!42;UBERON:0002390!1.05e-17!102;UBERON:0003061!1.05e-17!102;UBERON:0001893!4.52e-16!34;UBERON:0002020!5.68e-16!34;UBERON:0003528!5.68e-16!34;UBERON:0003075!1.08e-15!86;UBERON:0007284!1.08e-15!86;UBERON:0002791!1.94e-15!33;UBERON:0001869!2.90e-15!32;UBERON:0002193!1.09e-14!112;UBERON:0002346!7.01e-14!90;UBERON:0002619!1.23e-13!22;UBERON:0002371!2.38e-13!80;UBERON:0001950!2.30e-12!20;UBERON:0003056!2.81e-12!61;UBERON:0001474!2.03e-11!86;UBERON:0000956!8.47e-11!25;UBERON:0000203!8.47e-11!25;UBERON:0000153!1.38e-10!129;UBERON:0007811!1.38e-10!129;UBERON:0000033!1.37e-09!123;UBERON:0004765!3.69e-09!101;UBERON:0001434!3.69e-09!101;UBERON:0002405!2.33e-07!115;UBERON:0004121!3.69e-07!169;UBERON:0002420!3.83e-07!9;UBERON:0007245!3.83e-07!9;UBERON:0010009!3.83e-07!9;UBERON:0010011!3.83e-07!9;UBERON:0000454!3.83e-07!9;UBERON:0000479!4.36e-07!787;UBERON:0002308!7.46e-07!9;UBERON:0000125!7.46e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.36e-20;32!UBERON:0001893;1.43e-19;34!UBERON:0002791;3.36e-19;32!UBERON:0002780;5.28e-19;41!UBERON:0001890;5.28e-19;41!UBERON:0003528;9.42e-19;34!UBERON:0002020;9.42e-19;34!UBERON:0002619;1.25e-17;22!UBERON:0000073;1.71e-16;53!UBERON:0002616;1.71e-16;53!UBERON:0001950;1.14e-15;20!UBERON:0000956;7.61e-15;25!UBERON:0000203;7.61e-15;25!UBERON:0001017;1.37e-13;75!UBERON:0000955;2.93e-12;68!UBERON:0001016;1.44e-11;83!UBERON:0002420;1.53e-09;9!UBERON:0007245;1.53e-09;9!UBERON:0010009;1.53e-09;9!UBERON:0010011;1.53e-09;9!UBERON:0000454;1.53e-09;9!UBERON:0000125;5.40e-09;9!UBERON:0002308;5.40e-09;9!UBERON:0007023;9.54e-09;114!UBERON:0009663;2.63e-07;7!UBERON:0000349;4.49e-07;5!UBERON:0004732;6.55e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.74e-32,56;UBERON:0005068,1.74e-32,56;UBERON:0006241,1.74e-32,56;UBERON:0007135,1.74e-32,56;UBERON:0000073,6.13e-30,53;UBERON:0002616,6.13e-30,53;UBERON:0001017,2.52e-27,81;UBERON:0000955,1.55e-26,68;UBERON:0006238,1.55e-26,68;UBERON:0007023,1.60e-25,114;UBERON:0002780,2.29e-25,41;UBERON:0001890,2.29e-25,41;UBERON:0003080,2.29e-25,41;UBERON:0006240,2.29e-25,41;UBERON:0001016,2.25e-24,89;UBERON:0001869,1.68e-22,32;UBERON:0001893,1.86e-22,34;UBERON:0003528,2.66e-22,34;UBERON:0002020,2.66e-22,34;UBERON:0002791,1.63e-20,32;UBERON:0003075,3.50e-20,82;UBERON:0007284,3.50e-20,82;UBERON:0002346,1.43e-18,86;UBERON:0002619,7.82e-18,22;UBERON:0003056,3.55e-16,61;UBERON:0001950,1.03e-15,20;UBERON:0000956,5.07e-15,25;UBERON:0000203,5.07e-15,25;UBERON:0010371,6.79e-15,104;UBERON:0002390,2.96e-13,98;UBERON:0003061,2.96e-13,98;UBERON:0010314,2.91e-11,132;UBERON:0002371,3.52e-11,76;UBERON:0002193,7.38e-11,108;UBERON:0001474,1.23e-09,82;UBERON:0002420,2.05e-09,9;UBERON:0007245,2.05e-09,9;UBERON:0010009,2.05e-09,9;UBERON:0010011,2.05e-09,9;UBERON:0000454,2.05e-09,9;UBERON:0000125,5.75e-09,9;UBERON:0002308,5.75e-09,9;UBERON:0002405,1.13e-08,93;UBERON:0004121,1.65e-08,171;UBERON:0000924,1.65e-08,171;UBERON:0006601,1.65e-08,171;UBERON:0003076,2.89e-08,15;UBERON:0003057,2.89e-08,15;UBERON:0004765,6.05e-08,90;UBERON:0011216,2.35e-07,223;UBERON:0000349,2.88e-07,5;UBERON:0009663,3.73e-07,7;UBERON:0004732,4.78e-07,13;UBERON:0001434,7.59e-07,100 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.152826811495903,0.246301768349837,0.314843125254717,5.11373559903575,3.45446458287491,1.39334510984468,0,0,0,0,0,0.293600439334847,1.10799081706375,2.20598892217156,3.03815219002193,0.223915474239924,0.32389366601898,1.28787783817093,1.16318591023652,1.13362783106643,2.66842467306598,1.16214518452842,1.6446715520873,1.54853185447552,0.575384784644301,1.0246428261164,0.945928919554341,1.72372840368309,1.29096936716765,2.70852973188684,0.564727018627814,1.09162460023138,0.898893937780338,0.918251677112708,0.962787081228281,1.27867425159808,1.64925650093358,1.39624560335142,2.55734850319616,1.45104619314292,3.97169657283798,2.4912889959823,0.502497330513487,0.521482918420201,1.08594422352558,1.21079900526674,0.736555271975129,1.89877432464531,0.633765858935825,1.27562579979026,1.67726916406701,1.01095768031846,2.70318407114711,2.57160938715328,1.14005097496499,0.79566670879636,0.730656615058536,1.75996244461323,0,0.889509253863555,0,0,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,3.96513985737078,1.68152568894461,0.790152254325231,0.590129310341499,1.17903228824749,1.02800749499755,0,0.32592226663359,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0.812411591295047,0,0,0.164437904603676,0,0,0.296573126324121,0,0,0,0,0.34362744548263,0.506039384039006,0.637130828648193,0.651083453856419,0,0,0.383959833463255,0,0.473554504088034,0,1.41124720257313,2.40696176205157,1.30341963494519,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.175669571386252,1.17881167947941,0,0,0.649094787309367,0.696518949197069,0.26591592103773,4.29283123749616,10.2959083940423,2.97166001063652,0.198762407366705,0.860234595106124,0.347140501607594,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.366403487860815,2.63560834872127,7.75560528296651,0,0,0,0,0,0,0.560677600142307,0,0,0.622422070799533,0.134710672069688,0,3.17850598054356,1.15235184896,0.234321431833797,0,0,0,0,0,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0.438977620880838,0,0.150238058906597,0,0,0.213557388818567,0.211931901159562,0.300091096084402,0,0,0.18611685633159,0,0,0,0,0,0,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0.325808305310325,0,0,0.811512834825538,0,0,0,0,0,0,0.246217006087397,0.468008530278475,0.148631162288728,0,0,0.141775097242386,0,0,0,2.46331618947972,0.528290604079356,2.48793738648926,0.864719720501769,1.8936365013957,0,0.381988425558278,0,0,0,0,0,0.224262168690721,0.43596006883328,0,0.129271715757778,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0,2.10833939483032,0.239624855491583,0,0,0.579125226670317,0,0.537182889719687,0.112085143993527,2.1673383622212,1.07813787429759,2.69520376187472,0.508189248444927,1.30139853857622,0,0,0,10.4860983352606,2.99161459204025,7.0450637284126,0,0,0,0,0.178428988797162,0,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,1.37060810223918,3.77457766191941,1.03384013061444,0.862856803274467,1.17400313583789,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0.177561725313127,0,0,0,0,0,0,0.34444334449382,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.515205058238611,0,0.41254749960294,0,0,0,7.44364530849339,0.462145851343933,1.68854042198743,1.7918754422989,0.751941714077915,0.580066775656914,1.96021243057032,9.61545984984763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762520775695299,0,0.42793898803392,0,0,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0.354761064070598,0,0,0.379473173765715,0.349934720244983,0,0,0,0.282431402330337,0,0,0,0,0.507447609232169,3.0585488285695,0.569647187174163,1.42939065274673,1.64544909234478,2.59389324477087,1.08006287447623,2.37937552888281,0,0,0,0.557409525377156,0,0.569134746787313,0,0.199579371432817,0.191505370132367,0,0,0.561594356226918,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0.73254089635947,0,0,0,0,0.593929361665277,0.307160702099232,4.97073823883149,2.53204949538923,0,0,0,0,0,0,0.102268682502155,0.246169610922139,0,0,0,0,0.690503839458535,0,0,1.93866549219044,2.69027484669369,1.99613798001194,0,0,0,0,0,0.709163045303809,0,0,0.694499979733169,4.42870692906919,3.0149109656352,4.5774520895125,1.21637185924347,4.43321428430321,2.4132393686937,0,0.139423744278603,1.07730361905316,0,0,0.897576444097721,0.108647371922008,0,0.0915975934018623,0,1.02193298195737,0,0.332423363800313,0,0,0.335643173951685,0.189753732724185,0.158936578980379,0,0,0.141353071433941,1.29833183845255,0.995261931078505,0.707660516026713,0.611030144933625,0.889563386041866,0,0.522109747527277,2.15683625538167,3.21031058919516,2.34264445725339,0,0,0,0,1.20990716048664,4.28501866282686,2.84339608328196,3.00646838828985,0.103688191397247,0,0,0,0,0,0,0,0,0,1.7472666824203,0,0,0,0,0.484945082442097,0,1.80784592624426,0,0,2.15256706249988,0,0.0801588202515337,0.640358984218058,0,0.144090417154106,0,1.88754497648161,0,0,0,0.135904206073614,0.209205692624666,0,0.288950589901519,4.80336230967832,2.32739144116388,3.83239764200917,0,0.262887354279314,0.837847203816763,0.458320848023367,0,0.199679000498991,0.429226048136571,0.223171457441873,1.34366944973453,0,0,0.0787831823072236,0,0,0,0,7.95229689809303,1.90684768556206,0,0,0,0.674921674654501,0,3.40197517284938,0,0.394028536495991,1.99327434912993,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0.082092520749339,0.170388021785422,0.113312091520126,0.439656701034247,0,2.45637617086946,1.85125642439766,0,0,1.17466153824464,2.51526888159466,1.24271716604159,0.496166021811951,0,6.45500771418748,0,1.08803560673895,0,0.306345576763462,1.31149052283922,0.471162288750703,0.886068179966986,1.34228891392159,2.1282458220105,2.86704597845036,0.554645257684261,3.29110935589332,0.138348634936231,0,0,0,0,3.27834434064817,0.434763085832475,0.149254802886874,0,0,0.189403005275089,0,1.77962244319307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796191777397232,0.800055529326307,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0.553033744606923,0,0,0.327130788511688,0,0,0,2.79982354196902,0.213383459388282,0,0,0,0,0,0.76736622782191,0,0.157265941855896,0.218419276384028,0,0,0,0.558644917973244,0.318004350653419,0.0788617450012534,0.80057074828547,0,0.3062454773532,3.0187735795336,2.8339315265117,1.75597244962866,1.64093091392604,4.28521883576921,2.42050383624763,2.42213468447777,7.13847101295772,0,0,0,0,0,0,0,0.601682626794058,0,0,0.785720083444267,0,0,2.90411613859097,0.781078098613847,2.48024155801421,1.96589011601111,5.4697480901822,0,0,0,0,1.60710550763486,3.02655349996942,3.03482802118316,0.91064876540519,0.354809480650555,0.230467975111559,0,2.65081958609644,2.36781984826257,0,0,0.941917114206168,3.14231179832004,0,2.73947616152849,0,0,3.00201485541957,0,0.23248285073625,9.04063015973413,0,0,0,0.691259661814092,0.430227358820278,0.118332000730565,0,0,0.22910686854405,0,0,0,0,0,9.71143255781842,5.95444279766233,59.1505359982482,5.34282092365053,2.10545517115895,0.397901550322736,0,0,0,0.150962843566674,1.389134845943,2.18559560503957,0,0,0,1.37415926980462,1.18818560130834,3.8039015482506,0,0.751871343838829,2.90060495881097,0.0999411559249289,0,0,0,2.19100916473955,0,0.860037498908708,0.473314686579554,2.37970215668201,5.23620828408453,1.5870805215462,0,0,0,0,0.109265571963696,0.506794004045748,0,0,0.18378979906969,0.250707539292375,0.530450887527676,0.803892390468535,0.829169439458779,1.86179392551411,1.70587185520785,8.57031953269465,1.29177819672012,0.869046000142011,0,0.12729431655633,0,1.52401723527873,4.44903291410865,0.606168477131288,0.286888821570705,3.65926392200615,0,0.106727345877715,0,0.179650404213174,2.34640942403454,0.855690109280065,0.813792356631477,0,1.00636896795513,0 | |||
|short_description=p1@NCOA1 | |||
}} |
Latest revision as of 13:01, 16 September 2015
Short description: | p1@NCOA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NCOA1_5end |
Coexpression cluster: | C134_skeletal_diaphragm_tongue_throat_Skeletal_skin_penis |
Association with transcript: | -21bp_to_ENST00000496333_5end |
EntrezGene: | NCOA1 |
HGNC: | 7668 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.30e-19 | 72 |
classical monocyte | 3.07e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.07e-15 | 42 |
defensive cell | 1.81e-14 | 48 |
phagocyte | 1.81e-14 | 48 |
leukocyte | 3.80e-14 | 136 |
granulocyte monocyte progenitor cell | 4.20e-13 | 67 |
myeloid lineage restricted progenitor cell | 2.48e-12 | 66 |
monopoietic cell | 9.59e-12 | 59 |
monocyte | 9.59e-12 | 59 |
monoblast | 9.59e-12 | 59 |
promonocyte | 9.59e-12 | 59 |
macrophage dendritic cell progenitor | 4.52e-11 | 61 |
granulocyte | 5.07e-11 | 8 |
myeloid cell | 2.19e-10 | 108 |
common myeloid progenitor | 2.19e-10 | 108 |
hematopoietic stem cell | 1.14e-09 | 168 |
hematopoietic cell | 1.66e-09 | 177 |
hematopoietic oligopotent progenitor cell | 1.72e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.72e-08 | 161 |
nongranular leukocyte | 1.75e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 1.78e-08 | 120 |
blood cell | 1.91e-07 | 11 |