FFCP PHASE1:Hg19::chr7:137028534..137028548,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:137028534..137028548,- to FFCP PHASE1:Hg19::chr7:137028534..137028548,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5764 | |EntrezGene=5764 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9630 | |HGNC=9630 | ||
|TSSclassifier=strong | |||
|UniProt=P21246 | |UniProt=P21246 | ||
|association_with_transcript=0bp_to_NM_002825,uc003vtq.2,uc003vtr.1,uc010lmx.2_5end | |||
|cluster_id=chr7:137028534..137028548,- | |||
|coexpression_cluster_id=C808 | |||
|description=CAGE_peak_3_at_PTN_5end | |||
|id=chr7:137028534..137028548,- | |||
|ontology_enrichment_celltype=CL:0002319!6.25e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;8.35e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.85e-07,8;CL:0002319,7.32e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.28e-16;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!4.48e-55!86;UBERON:0001017!8.67e-55!82;UBERON:0000073!1.54e-52!94;UBERON:0001016!1.54e-52!94;UBERON:0001049!1.47e-46!57;UBERON:0005068!1.47e-46!57;UBERON:0006241!1.47e-46!57;UBERON:0007135!1.47e-46!57;UBERON:0007023!1.52e-45!115;UBERON:0000955!7.48e-45!69;UBERON:0006238!7.48e-45!69;UBERON:0002616!1.26e-42!59;UBERON:0003075!4.25e-38!86;UBERON:0007284!4.25e-38!86;UBERON:0002346!4.52e-37!90;UBERON:0004121!1.82e-35!169;UBERON:0003080!3.06e-35!42;UBERON:0000153!3.19e-35!129;UBERON:0007811!3.19e-35!129;UBERON:0000924!3.55e-35!173;UBERON:0006601!3.55e-35!173;UBERON:0000033!8.32e-35!123;UBERON:0002780!1.17e-34!41;UBERON:0001890!1.17e-34!41;UBERON:0006240!1.17e-34!41;UBERON:0001893!1.20e-28!34;UBERON:0002020!2.13e-28!34;UBERON:0003528!2.13e-28!34;UBERON:0002791!8.39e-28!33;UBERON:0003056!8.93e-28!61;UBERON:0001869!5.40e-27!32;UBERON:0000956!1.86e-21!25;UBERON:0000203!1.86e-21!25;UBERON:0002619!2.15e-19!22;UBERON:0001950!9.37e-18!20;UBERON:0000475!6.14e-15!365;UBERON:0000062!8.65e-13!511;UBERON:0003076!4.04e-12!15;UBERON:0003057!4.04e-12!15;UBERON:0000481!9.55e-12!347;UBERON:0004111!7.91e-11!241;UBERON:0000477!1.15e-10!286;UBERON:0004732!1.98e-10!13;UBERON:0000468!2.04e-10!659;UBERON:0000025!4.13e-10!194;UBERON:0004733!8.72e-10!12;UBERON:0002028!8.72e-10!12;UBERON:0007277!8.72e-10!12;UBERON:0000064!2.01e-09!219;UBERON:0002420!1.48e-08!9;UBERON:0007245!1.48e-08!9;UBERON:0010009!1.48e-08!9;UBERON:0010011!1.48e-08!9;UBERON:0000454!1.48e-08!9;UBERON:0000467!2.07e-08!625;UBERON:0002308!2.38e-08!9;UBERON:0000125!2.38e-08!9;UBERON:0000480!2.70e-08!626;UBERON:0000922!4.31e-08!612;UBERON:0002680!1.05e-07!9;UBERON:0001895!1.05e-07!9;UBERON:0010092!1.05e-07!9;UBERON:0000119!1.18e-07!312;UBERON:0001871!1.40e-07!7;UBERON:0001894!2.28e-07!7;UBERON:0006222!2.28e-07!7;UBERON:0002298!3.44e-07!8;UBERON:0000483!4.57e-07!309;UBERON:0009663!6.53e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.05e-37;41!UBERON:0001890;5.05e-37;41!UBERON:0001893;2.03e-36;34!UBERON:0001869;3.32e-36;32!UBERON:0002791;3.47e-36;32!UBERON:0003528;4.30e-36;34!UBERON:0002020;4.30e-36;34!UBERON:0000073;4.47e-36;53!UBERON:0002616;4.47e-36;53!UBERON:0000956;1.37e-31;25!UBERON:0000203;1.37e-31;25!UBERON:0002619;1.71e-28;22!UBERON:0000955;2.96e-28;68!UBERON:0001017;4.58e-27;75!UBERON:0001950;5.38e-26;20!UBERON:0001016;2.55e-24;83!UBERON:0007023;1.68e-15;114!UBERON:0004732;3.03e-13;13!UBERON:0004733;2.87e-12;12!UBERON:0002028;2.87e-12;12!UBERON:0002420;4.16e-12;9!UBERON:0007245;4.16e-12;9!UBERON:0010009;4.16e-12;9!UBERON:0010011;4.16e-12;9!UBERON:0000454;4.16e-12;9!UBERON:0000125;8.23e-12;9!UBERON:0002308;8.23e-12;9!UBERON:0011216;4.10e-11;132!UBERON:0001894;2.71e-10;7!UBERON:0009663;1.18e-09;7!UBERON:0001871;1.85e-09;6!UBERON:0002680;3.76e-09;9!UBERON:0001895;3.76e-09;9!UBERON:0000922;9.73e-09;49!UBERON:0000200;1.54e-08;6!UBERON:0002298;3.92e-08;6!UBERON:0000349;8.78e-08;5!UBERON:0002021;1.39e-07;5!UBERON:0001872;1.92e-07;5!UBERON:0010314;8.09e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.21e-73,81;UBERON:0001016,5.24e-71,89;UBERON:0001049,1.16e-66,56;UBERON:0005068,1.16e-66,56;UBERON:0006241,1.16e-66,56;UBERON:0007135,1.16e-66,56;UBERON:0000073,7.78e-63,53;UBERON:0002616,7.78e-63,53;UBERON:0000955,7.72e-60,68;UBERON:0006238,7.72e-60,68;UBERON:0007023,2.70e-55,114;UBERON:0003075,1.01e-52,82;UBERON:0007284,1.01e-52,82;UBERON:0002780,1.81e-51,41;UBERON:0001890,1.81e-51,41;UBERON:0003080,1.81e-51,41;UBERON:0006240,1.81e-51,41;UBERON:0002346,1.02e-50,86;UBERON:0004121,2.48e-43,171;UBERON:0000924,2.48e-43,171;UBERON:0006601,2.48e-43,171;UBERON:0001893,2.21e-42,34;UBERON:0003528,5.26e-42,34;UBERON:0002020,5.26e-42,34;UBERON:0011216,2.03e-41,223;UBERON:0001869,6.96e-40,32;UBERON:0002791,9.41e-40,32;UBERON:0010371,5.01e-38,104;UBERON:0003056,6.83e-38,61;UBERON:0010314,6.23e-34,132;UBERON:0000956,1.61e-31,25;UBERON:0000203,1.61e-31,25;UBERON:0002619,2.09e-28,22;UBERON:0001950,6.22e-26,20;UBERON:0003076,9.99e-16,15;UBERON:0003057,9.99e-16,15;UBERON:0004111,4.01e-15,240;UBERON:0000025,2.61e-13,192;UBERON:0004732,3.20e-13,13;UBERON:0004733,2.98e-12,12;UBERON:0002028,2.98e-12,12;UBERON:0007277,2.98e-12,12;UBERON:0002420,4.39e-12,9;UBERON:0007245,4.39e-12,9;UBERON:0010009,4.39e-12,9;UBERON:0010011,4.39e-12,9;UBERON:0000454,4.39e-12,9;UBERON:0000125,8.97e-12,9;UBERON:0002308,8.97e-12,9;UBERON:0000922,1.69e-10,592;UBERON:0001894,2.66e-10,7;UBERON:0006222,2.66e-10,7;UBERON:0009663,1.29e-09,7;UBERON:0001871,1.97e-09,6;UBERON:0002680,3.77e-09,9;UBERON:0001895,3.77e-09,9;UBERON:0010092,3.77e-09,9;UBERON:0002050,9.38e-09,564;UBERON:0000923,1.40e-08,560;UBERON:0010316,1.40e-08,560;UBERON:0005291,1.40e-08,560;UBERON:0006598,1.40e-08,560;UBERON:0010317,1.40e-08,560;UBERON:0002532,1.40e-08,560;UBERON:0000200,1.55e-08,6;UBERON:0005423,2.78e-08,581;UBERON:0002298,4.17e-08,6;UBERON:0000349,9.07e-08,5;UBERON:0002021,1.51e-07,5;UBERON:0001872,1.89e-07,5;UBERON:0000119,2.35e-07,309;UBERON:0000483,3.10e-07,306 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0,0,0,5.29420549730188,0.612002073732759,8.77673220138646,16.3154512664702,3.69560947696787,8.41135685285179,0,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.144846518960824,2.3858578411533,1.94653948121054,1.51255707462509,0.665188192387692,0.527008714158756,3.1434978119451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0.163461903113459,6.81108424402191,1.15235184896,0.234321431833797,0,0,0.298897361103602,0,0,0,0,0.122834317311768,0.206651562351531,13.0680314301026,2.96720315134268,0,0,0.673344455816265,0.625592599359821,0,0.438977620880838,0,1.35214253015937,0.113432183160021,0.358779271377724,0.213557388818567,1.05965950579781,1.50045548042201,0.824420233907511,0.772921620136887,0.558350568994769,0.168776332241266,0.194874010322397,0,1.19664868234989,0.80823028409406,1.06502877754984,0.503760491138201,0.508681776931463,0,0,0,1.21973706129595,1.32529768321485,1.74290914304278,10.5734276115678,2.27088765788066,0.36497735907583,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,1.18157981336281,0,0,0.514703430895577,0,0,0,0,0,0,0,5.56465943880369,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672786506072164,3.05172048183296,0.80672114403045,0.387815147273333,0,0,4.5209479819428,1.04007436911366,0.257207374262142,0,0.266422179016099,0.142977993658148,0.542621605391443,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,87.9167399809723,26.0279707715243,13.9191986299985,6.36561808270525,12.7587750330633,0,0,0,0.736148950314839,0,0,0,0.178428988797162,0.157702415033935,0,1.80567659836631,2.27407504055985,1.03473071292505,1.32845119707087,0.184369168541703,0.173767228936166,22.5171331082152,24.7063265143816,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0,1.95184561879831,1.45672934405374,4.19598127870157,0,0.15403067420883,0,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0,0,0,0,0,1.28225062558195,0.328014645699706,0,0.412164046590889,0.0915694648183434,0.165018999841176,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0.145016693914229,0,0,0,0,0,0,0,0.94443704049192,0,0,0,0,0.18532421910392,0,0,0.316379424718726,0,0,0,0,0,0.359744915166629,0.274537029736055,0.353437207037059,0.202182481573316,0,0,0.48763373908959,0,0,2.32049849393576,2.2624869112594,0,0,0,0,0,0.655894752046633,0,0,0,0.430234056612155,0.294747123039363,0,0.709522128141196,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,7.46670674659105,0,0,1.18785872333055,0,16.9005100120271,19.8343877138823,0,0,0.63337622438398,0.398495976502139,1.10513566212459,0,0.715880777515084,0,0,0,0,0,1.38100767891707,0,0,20.3559876679996,19.5740687121506,11.9768278800717,0,0,3.62499787717397,0,0,0,0,0,5.72962483279864,14.1718621730214,18.0894657938112,13.7323562685375,21.0100593869327,17.1417618993058,36.6373613247134,0,0,6.00212016329617,0,0,0,0,0,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,1.99052386215701,1.50377859655677,7.94339188413713,0,0,0,21.0965546229519,0.802577647298789,23.8949734639846,0,0.978323094660449,0,2.36750641709634,1.20990716048664,30.9133489246795,5.49723242767845,0,0,0,0,0,0,0,0.277349346026277,0,0,0,2.62090002363045,0,0,0,0,2.71569246167574,0,16.9485555585399,0,0,20.8292518694841,0,0,8.1112138000954,0,0,0,0,0,0,0,0.135904206073614,0.418411385249333,2.3459590056354,2.88950589901519,8.40588404193705,10.5417141746835,0,4.29765441419957,0,3.0721064139948,3.66656678418694,0,0,0.429226048136571,1.11585728720936,4.43410918412393,1.44119953416961,0,0,0,0,0,0,13.5189047267582,24.380409693972,0.803765742325096,1.37539436597234,1.66176135211674,0,0,15.0658900511901,0,1.26089131678717,7.81573363211472,0,0,0.383830394638891,2.1440859791201,1.32418394073086,0,0,0,0,0,0.082092520749339,3.74853647927928,0,0.146552233678082,0,13.5747104179628,10.5786081394152,0,0,0.213574825135389,6.13096789888697,1.65695622138878,0,0,0,0,0,0,0,0,5.0257310800075,12.4049545195378,12.8127578147061,15.6488663383125,6.30750115259078,12.3131247205906,13.599112244163,0,1.12482367165896,0,0,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0.15543720058278,0,0.159296767163702,0,0.310525913752519,1.24411862352257,0,0.521745061811734,0,0,0,0,0.322231671127465,0.464033759878494,0.398095888698616,0,0,0.673498977531838,0,0,0,0.260994291965212,0.680117776536817,0.463044948647668,0.244736704506468,0,0.617602894321944,0,0,0,0,0,0,0,20.1857316781527,0,0,0,0.655219697692825,0,0,0.19998739585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| ||
|short_description=p3@PTN | |||
}} | }} |
Latest revision as of 14:12, 16 September 2015
Short description: | p3@PTN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PTN_5end |
Coexpression cluster: | C808_Neural_spinal_cerebral_hippocampus_cerebellum_duodenum_corpus |
Association with transcript: | 0bp_to_NM_002825, uc003vtq.2, uc003vtr.1, uc010lmx.2_5end |
EntrezGene: | PTN |
HGNC: | 9630 |
UniProt: | P21246 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.85e-07 | 8 |
neural cell | 7.32e-07 | 25 |