FFCP PHASE1:Hg19::chr1:150230247..150230279,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23632 | |EntrezGene=23632 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1372 | |HGNC=1372 | ||
|TSSclassifier=strong | |||
|UniProt=A8K3J4,Q9ULX7 | |UniProt=A8K3J4,Q9ULX7 | ||
|association_with_transcript=29bp_to_NM_012113,uc001etx.2,uc009wln.2_5end | |association_with_transcript=29bp_to_NM_012113,uc001etx.2,uc009wln.2_5end | ||
|cluster_id=chr1:150230247..150230279,+ | |||
|coexpression_cluster_id=C1249 | |coexpression_cluster_id=C1249 | ||
|description=CAGE_peak_2_at_CA14_5end | |description=CAGE_peak_2_at_CA14_5end | ||
|id=chr1:150230247..150230279,+ | |id=chr1:150230247..150230279,+ | ||
|ontology_enrichment_celltype=CL:0000147!1.99e-15!14;CL:0000148!1.96e-14!10;CL:0000541!1.96e-14!10;CL:0000710!4.48e-09!20;CL:0000133!5.19e-09!59;CL:0000075!6.45e-08!27;CL:0002322!6.77e-08!5;CL:0000540!7.83e-08!6;CL:0000031!7.83e-08!6;CL:0000404!7.83e-08!6;CL:0000047!1.01e-07!8;CL:0000221!7.06e-07!71 | |ontology_enrichment_celltype=CL:0000147!1.99e-15!14;CL:0000148!1.96e-14!10;CL:0000541!1.96e-14!10;CL:0000710!4.48e-09!20;CL:0000133!5.19e-09!59;CL:0000075!6.45e-08!27;CL:0002322!6.77e-08!5;CL:0000540!7.83e-08!6;CL:0000031!7.83e-08!6;CL:0000404!7.83e-08!6;CL:0000047!1.01e-07!8;CL:0000221!7.06e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000148;2.48e-20;10!CL:0000147;3.39e-19;14!CL:0000540;6.91e-11;6!CL:0000404;6.91e-11;6!CL:0002322;7.19e-11;5!CL:0000710;6.41e-09;20!CL:0000075;2.33e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.16e-20,10;CL:0000541,2.16e-20,10;CL:0000147,3.77e-19,14;CL:0002322,7.90e-11,5;CL:0000047,8.65e-11,8;CL:0000540,9.77e-11,6;CL:0000031,9.77e-11,6;CL:0000404,9.77e-11,6;CL:0000710,6.03e-09,20;CL:0000075,2.17e-07,27 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.49e-12;82!CL:0000031;6.91e-11;6!UBERON:0006241;1.64e-07;3!UBERON:0003057;1.64e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.76e-28;34!UBERON:0003528;6.25e-27;34!UBERON:0002020;6.25e-27;34!UBERON:0002791;8.28e-26;32!UBERON:0001869;1.26e-25;32!UBERON:0002780;2.12e-25;41!UBERON:0001890;2.12e-25;41!UBERON:0002619;1.76e-24;22!UBERON:0000073;4.05e-23;53!UBERON:0002616;4.05e-23;53!UBERON:0001950;1.85e-21;20!UBERON:0000956;4.89e-21;25!UBERON:0000203;4.89e-21;25!UBERON:0001017;7.86e-16;75!UBERON:0001016;1.14e-13;83!UBERON:0000955;1.22e-13;68!UBERON:0000125;2.96e-13;9!UBERON:0002308;2.96e-13;9!UBERON:0002298;8.68e-13;6!UBERON:0007023;1.35e-10;114!UBERON:0009663;5.90e-10;7!UBERON:0002420;6.64e-10;9!UBERON:0007245;6.64e-10;9!UBERON:0010009;6.64e-10;9!UBERON:0010011;6.64e-10;9!UBERON:0000454;6.64e-10;9!UBERON:0001872;1.72e-09;5!UBERON:0004732;2.91e-09;13!UBERON:0000200;7.73e-08;6!UBERON:0004733;1.11e-07;12!UBERON:0002028;1.11e-07;12!UBERON:0001896;1.49e-07;3!UBERON:0005290;1.49e-07;3!UBERON:0002240;1.64e-07;3!UBERON:0005174;1.64e-07;3!UBERON:0001137;1.64e-07;3!UBERON:0000988;6.74e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.50e-48,81;UBERON:0001049,1.64e-47,56;UBERON:0005068,1.64e-47,56;UBERON:0006241,1.64e-47,56;UBERON:0007135,1.64e-47,56;UBERON:0001016,3.74e-46,89;UBERON:0000073,3.62e-42,53;UBERON:0002616,3.62e-42,53;UBERON:0003075,1.05e-41,82;UBERON:0007284,1.05e-41,82;UBERON:0002346,4.03e-39,86;UBERON:0002780,7.69e-36,41;UBERON:0001890,7.69e-36,41;UBERON:0003080,7.69e-36,41;UBERON:0006240,7.69e-36,41;UBERON:0007023,1.78e-35,114;UBERON:0000955,8.36e-34,68;UBERON:0006238,8.36e-34,68;UBERON:0001893,1.23e-32,34;UBERON:0003528,2.23e-32,34;UBERON:0002020,2.23e-32,34;UBERON:0010371,1.63e-31,104;UBERON:0003056,1.27e-30,61;UBERON:0002791,3.46e-29,32;UBERON:0001869,6.43e-29,32;UBERON:0010314,2.06e-28,132;UBERON:0004121,9.98e-27,171;UBERON:0000924,9.98e-27,171;UBERON:0006601,9.98e-27,171;UBERON:0002619,2.09e-24,22;UBERON:0001950,2.22e-21,20;UBERON:0000956,5.68e-21,25;UBERON:0000203,5.68e-21,25;UBERON:0011216,2.07e-17,223;UBERON:0000125,2.82e-13,9;UBERON:0002308,2.82e-13,9;UBERON:0002298,8.89e-13,6;UBERON:0003076,1.81e-12,15;UBERON:0003057,1.81e-12,15;UBERON:0000025,1.39e-11,192;UBERON:0009663,5.91e-10,7;UBERON:0002420,7.58e-10,9;UBERON:0007245,7.58e-10,9;UBERON:0010009,7.58e-10,9;UBERON:0010011,7.58e-10,9;UBERON:0000454,7.58e-10,9;UBERON:0001872,1.91e-09,5;UBERON:0004732,2.87e-09,13;UBERON:0004111,3.32e-09,240;UBERON:0000200,7.80e-08,6;UBERON:0004733,1.09e-07,12;UBERON:0002028,1.09e-07,12;UBERON:0007277,1.09e-07,12;UBERON:0002240,1.52e-07,3;UBERON:0005174,1.52e-07,3;UBERON:0001137,1.52e-07,3;UBERON:0001896,1.66e-07,3;UBERON:0005290,1.66e-07,3;UBERON:0010096,1.66e-07,3;UBERON:0000483,2.69e-07,306;UBERON:0000119,4.25e-07,309;UBERON:0000988,6.23e-07,3 | |||
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|short_description=p2@CA14 | |short_description=p2@CA14 | ||
}} | }} |
Latest revision as of 21:46, 16 September 2015
Short description: | p2@CA14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CA14_5end |
Coexpression cluster: | C1249_Melanocyte_anaplastic_Wilms_retina_heart_optic_teratocarcinoma |
Association with transcript: | 29bp_to_NM_012113, uc001etx.2, uc009wln.2_5end |
EntrezGene: | CA14 |
HGNC: | 1372 |
UniProt: | A8K3J4Q9ULX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.16e-20 | 10 |
melanoblast | 2.16e-20 | 10 |
pigment cell | 3.77e-19 | 14 |
embryonic stem cell | 7.90e-11 | 5 |
neuronal stem cell | 8.65e-11 | 8 |
neuron | 9.77e-11 | 6 |
neuroblast | 9.77e-11 | 6 |
electrically signaling cell | 9.77e-11 | 6 |
neurecto-epithelial cell | 6.03e-09 | 20 |
columnar/cuboidal epithelial cell | 2.17e-07 | 27 |