FFCP PHASE1:Hg19::chr11:1778687..1778733,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1509 | |EntrezGene=1509 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2529 | |HGNC=2529 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_BC001574_5end | |association_with_transcript=0bp_to_BC001574_5end | ||
|cluster_id=chr11:1778687..1778733,- | |||
|coexpression_cluster_id=C71 | |coexpression_cluster_id=C71 | ||
|description=CAGE_peak_4_at_CTSD_5end | |description=CAGE_peak_4_at_CTSD_5end | ||
|id=chr11:1778687..1778733,- | |id=chr11:1778687..1778733,- | ||
|ontology_enrichment_celltype=CL:0000766!3.80e-17!76;CL:0000839!1.01e-16!70;CL:0002194!1.42e-16!63;CL:0000576!1.42e-16!63;CL:0000040!1.42e-16!63;CL:0000559!1.42e-16!63;CL:0000557!4.10e-16!71;CL:0002009!4.37e-15!65;CL:0002057!2.43e-14!42;CL:0000860!1.64e-13!45;CL:0002320!3.09e-07!365;CL:0000763!5.51e-07!112;CL:0000049!5.51e-07!112 | |ontology_enrichment_celltype=CL:0000766!3.80e-17!76;CL:0000839!1.01e-16!70;CL:0002194!1.42e-16!63;CL:0000576!1.42e-16!63;CL:0000040!1.42e-16!63;CL:0000559!1.42e-16!63;CL:0000557!4.10e-16!71;CL:0002009!4.37e-15!65;CL:0002057!2.43e-14!42;CL:0000860!1.64e-13!45;CL:0002320!3.09e-07!365;CL:0000763!5.51e-07!112;CL:0000049!5.51e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.96e-18;39!CL:0000234;1.96e-18;39!CL:0000860;3.79e-17;33!CL:0002057;3.79e-17;33!CL:0000576;1.39e-11;48!CL:0000766;8.63e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.06e-21,48;CL:0000234,1.06e-21,48;CL:0000766,1.78e-21,72;CL:0000839,4.23e-21,66;CL:0002194,8.24e-21,59;CL:0000576,8.24e-21,59;CL:0000040,8.24e-21,59;CL:0000559,8.24e-21,59;CL:0000557,2.09e-20,67;CL:0002009,2.35e-19,61;CL:0000860,3.66e-17,42;CL:0002057,3.66e-17,42;CL:0000763,1.13e-10,108;CL:0000049,1.13e-10,108;CL:0002320,5.07e-10,361;CL:0000134,6.27e-09,354;CL:0000048,3.09e-08,427;CL:0000219,5.71e-08,386;CL:0000723,9.49e-08,433;CL:0000034,2.97e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.23e-12;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.36e-15!80;UBERON:0002405!9.19e-15!115;UBERON:0001474!4.94e-14!86;UBERON:0004765!3.30e-12!101;UBERON:0001434!3.30e-12!101;UBERON:0002204!7.55e-10!167;UBERON:0002193!1.97e-09!112;UBERON:0002390!6.59e-09!102;UBERON:0003061!6.59e-09!102;UBERON:0000926!2.21e-07!448;UBERON:0004120!2.21e-07!448;UBERON:0006603!2.21e-07!448 | |ontology_enrichment_uberon=UBERON:0002371!3.36e-15!80;UBERON:0002405!9.19e-15!115;UBERON:0001474!4.94e-14!86;UBERON:0004765!3.30e-12!101;UBERON:0001434!3.30e-12!101;UBERON:0002204!7.55e-10!167;UBERON:0002193!1.97e-09!112;UBERON:0002390!6.59e-09!102;UBERON:0003061!6.59e-09!102;UBERON:0000926!2.21e-07!448;UBERON:0004120!2.21e-07!448;UBERON:0006603!2.21e-07!448 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.47e-19,76;UBERON:0001474,2.87e-17,82;UBERON:0004765,1.59e-16,90;UBERON:0001434,4.08e-16,100;UBERON:0002405,3.23e-15,93;UBERON:0002204,1.47e-11,167;UBERON:0002193,2.14e-11,108;UBERON:0002390,3.24e-11,98;UBERON:0003061,3.24e-11,98;UBERON:0002384,1.87e-09,371;UBERON:0003081,1.42e-07,203;UBERON:0000926,2.22e-07,315;UBERON:0004120,2.22e-07,315;UBERON:0006603,2.22e-07,315 | |||
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| ||
|short_description=p4@CTSD | |short_description=p4@CTSD | ||
}} | }} |
Latest revision as of 01:13, 17 September 2015
Short description: | p4@CTSD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CTSD_5end |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | 0bp_to_BC001574_5end |
EntrezGene: | CTSD |
HGNC: | 2529 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.06e-21 | 48 |
phagocyte | 1.06e-21 | 48 |
myeloid leukocyte | 1.78e-21 | 72 |
myeloid lineage restricted progenitor cell | 4.23e-21 | 66 |
monopoietic cell | 8.24e-21 | 59 |
monocyte | 8.24e-21 | 59 |
monoblast | 8.24e-21 | 59 |
promonocyte | 8.24e-21 | 59 |
granulocyte monocyte progenitor cell | 2.09e-20 | 67 |
macrophage dendritic cell progenitor | 2.35e-19 | 61 |
classical monocyte | 3.66e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.66e-17 | 42 |
myeloid cell | 1.13e-10 | 108 |
common myeloid progenitor | 1.13e-10 | 108 |
connective tissue cell | 5.07e-10 | 361 |
mesenchymal cell | 6.27e-09 | 354 |
multi fate stem cell | 3.09e-08 | 427 |
motile cell | 5.71e-08 | 386 |
somatic stem cell | 9.49e-08 | 433 |
stem cell | 2.97e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.47e-19 | 76 |
bone element | 2.87e-17 | 82 |
skeletal element | 1.59e-16 | 90 |
skeletal system | 4.08e-16 | 100 |
immune system | 3.23e-15 | 93 |
musculoskeletal system | 1.47e-11 | 167 |
hemolymphoid system | 2.14e-11 | 108 |
hematopoietic system | 3.24e-11 | 98 |
blood island | 3.24e-11 | 98 |
connective tissue | 1.87e-09 | 371 |
lateral plate mesoderm | 1.42e-07 | 203 |
mesoderm | 2.22e-07 | 315 |
mesoderm-derived structure | 2.22e-07 | 315 |
presumptive mesoderm | 2.22e-07 | 315 |