FFCP PHASE1:Hg19::chr3:183979353..183979390,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=94032 | |EntrezGene=94032 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24197 | |HGNC=24197 | ||
|TSSclassifier=strong | |||
|UniProt=Q96S95 | |UniProt=Q96S95 | ||
|association_with_transcript=-102bp_to_ENST00000296238,NM_033259,uc003fnj.1_5end | |association_with_transcript=-102bp_to_ENST00000296238,NM_033259,uc003fnj.1_5end | ||
|cluster_id=chr3:183979353..183979390,- | |||
|coexpression_cluster_id=C2734 | |coexpression_cluster_id=C2734 | ||
|description=CAGE_peak_3_at_CAMK2N2_5end | |description=CAGE_peak_3_at_CAMK2N2_5end | ||
|id=chr3:183979353..183979390,- | |id=chr3:183979353..183979390,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,9.14e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.53e-12;82 | |||
|ontology_enrichment_disease=DOID:305!1.53e-11!106;DOID:0050687!2.01e-11!143;DOID:14566!5.78e-11!239;DOID:162!9.47e-11!235 | |ontology_enrichment_disease=DOID:305!1.53e-11!106;DOID:0050687!2.01e-11!143;DOID:14566!5.78e-11!239;DOID:162!9.47e-11!235 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.52e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0005743!2.96e-30!86;UBERON:0000073!3.97e-30!94;UBERON:0001016!3.97e-30!94;UBERON:0001017!9.33e-30!82;UBERON:0001049!1.33e-25!57;UBERON:0005068!1.33e-25!57;UBERON:0006241!1.33e-25!57;UBERON:0007135!1.33e-25!57;UBERON:0000955!1.21e-23!69;UBERON:0006238!1.21e-23!69;UBERON:0002780!9.70e-22!41;UBERON:0001890!9.70e-22!41;UBERON:0006240!9.70e-22!41;UBERON:0002020!3.30e-21!34;UBERON:0003528!3.30e-21!34;UBERON:0001893!6.72e-21!34;UBERON:0003080!1.17e-20!42;UBERON:0002616!1.47e-20!59;UBERON:0002791!3.24e-20!33;UBERON:0001869!4.79e-20!32;UBERON:0003075!1.20e-19!86;UBERON:0007284!1.20e-19!86;UBERON:0002346!3.91e-18!90;UBERON:0004121!1.01e-16!169;UBERON:0002619!1.26e-16!22;UBERON:0003056!2.73e-16!61;UBERON:0000956!5.43e-16!25;UBERON:0000203!5.43e-16!25;UBERON:0000924!6.87e-16!173;UBERON:0006601!6.87e-16!173;UBERON:0001950!2.27e-15!20;UBERON:0000033!7.72e-14!123;UBERON:0000153!4.12e-12!129;UBERON:0007811!4.12e-12!129;UBERON:0000025!2.02e-11!194;UBERON:0000483!4.78e-08!309;UBERON:0000477!4.78e-08!286;UBERON:0000064!6.74e-08!219;UBERON:0000475!8.76e-08!365;UBERON:0004111!9.52e-08!241;UBERON:0000119!1.16e-07!312;UBERON:0000481!6.69e-07!347;UBERON:0002420!9.26e-07!9;UBERON:0007245!9.26e-07!9;UBERON:0010009!9.26e-07!9;UBERON:0010011!9.26e-07!9;UBERON:0000454!9.26e-07!9 | |ontology_enrichment_uberon=UBERON:0005743!2.96e-30!86;UBERON:0000073!3.97e-30!94;UBERON:0001016!3.97e-30!94;UBERON:0001017!9.33e-30!82;UBERON:0001049!1.33e-25!57;UBERON:0005068!1.33e-25!57;UBERON:0006241!1.33e-25!57;UBERON:0007135!1.33e-25!57;UBERON:0000955!1.21e-23!69;UBERON:0006238!1.21e-23!69;UBERON:0002780!9.70e-22!41;UBERON:0001890!9.70e-22!41;UBERON:0006240!9.70e-22!41;UBERON:0002020!3.30e-21!34;UBERON:0003528!3.30e-21!34;UBERON:0001893!6.72e-21!34;UBERON:0003080!1.17e-20!42;UBERON:0002616!1.47e-20!59;UBERON:0002791!3.24e-20!33;UBERON:0001869!4.79e-20!32;UBERON:0003075!1.20e-19!86;UBERON:0007284!1.20e-19!86;UBERON:0002346!3.91e-18!90;UBERON:0004121!1.01e-16!169;UBERON:0002619!1.26e-16!22;UBERON:0003056!2.73e-16!61;UBERON:0000956!5.43e-16!25;UBERON:0000203!5.43e-16!25;UBERON:0000924!6.87e-16!173;UBERON:0006601!6.87e-16!173;UBERON:0001950!2.27e-15!20;UBERON:0000033!7.72e-14!123;UBERON:0000153!4.12e-12!129;UBERON:0007811!4.12e-12!129;UBERON:0000025!2.02e-11!194;UBERON:0000483!4.78e-08!309;UBERON:0000477!4.78e-08!286;UBERON:0000064!6.74e-08!219;UBERON:0000475!8.76e-08!365;UBERON:0004111!9.52e-08!241;UBERON:0000119!1.16e-07!312;UBERON:0000481!6.69e-07!347;UBERON:0002420!9.26e-07!9;UBERON:0007245!9.26e-07!9;UBERON:0010009!9.26e-07!9;UBERON:0010011!9.26e-07!9;UBERON:0000454!9.26e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.68e-27;22!UBERON:0003528;4.66e-27;34!UBERON:0002020;4.66e-27;34!UBERON:0001869;7.52e-27;32!UBERON:0001893;8.68e-27;34!UBERON:0002791;1.78e-26;32!UBERON:0001950;3.70e-25;20!UBERON:0002780;4.98e-25;41!UBERON:0001890;4.98e-25;41!UBERON:0000956;4.58e-23;25!UBERON:0000203;4.58e-23;25!UBERON:0000073;5.16e-23;53!UBERON:0002616;5.16e-23;53!UBERON:0001017;6.13e-18;75!UBERON:0000955;8.61e-17;68!UBERON:0001016;4.67e-16;83!UBERON:0002420;2.13e-10;9!UBERON:0007245;2.13e-10;9!UBERON:0010009;2.13e-10;9!UBERON:0010011;2.13e-10;9!UBERON:0000454;2.13e-10;9!UBERON:0000125;3.00e-10;9!UBERON:0002308;3.00e-10;9!UBERON:0001871;3.09e-09;6!UBERON:0000200;1.24e-08;6!UBERON:0009663;5.85e-08;7!UBERON:0004732;1.15e-07;13!UBERON:0002298;1.84e-07;6!UBERON:0001872;2.49e-07;5!UBERON:0000349;2.97e-07;5!UBERON:0002021;3.16e-07;5!UBERON:0004733;3.85e-07;12!UBERON:0002028;3.85e-07;12 | |||
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| ||
|short_description=p3@CAMK2N2 | |short_description=p3@CAMK2N2 | ||
}} | }} |
Latest revision as of 01:45, 17 September 2015
Short description: | p3@CAMK2N2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CAMK2N2_5end |
Coexpression cluster: | C2734_occipital_locus_brain_amygdala_cerebellum_temporal_postcentral |
Association with transcript: | -102bp_to_ENST00000296238, NM_033259, uc003fnj.1_5end |
EntrezGene: | CAMK2N2 |
HGNC: | 24197 |
UniProt: | Q96S95 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 9.14e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.52e-07 | 143 |