FFCP PHASE1:Hg19::chr13:31191527..31191540,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3146 | |EntrezGene=3146 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4983 | |HGNC=4983 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-17bp_to_uc001usz.2_5end | |association_with_transcript=-17bp_to_uc001usz.2_5end | ||
|cluster_id=chr13:31191527..31191540,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_20_at_HMGB1_5end | |description=CAGE_peak_20_at_HMGB1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.48e-18;82!UBERON:0010122;6.74e-11;2!UBERON:0006222;7.67e-07;1 | |ontology_enrichment_development_v019=UBERON:0006601;9.48e-18;82!UBERON:0010122;6.74e-11;2!UBERON:0006222;7.67e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.98e-34!57;UBERON:0005068!7.98e-34!57;UBERON:0006241!7.98e-34!57;UBERON:0007135!7.98e-34!57;UBERON:0007023!2.61e-31!115;UBERON:0002616!5.13e-31!59;UBERON:0000955!2.55e-30!69;UBERON:0006238!2.55e-30!69;UBERON:0002346!3.99e-30!90;UBERON:0001017!5.04e-30!82;UBERON:0003075!1.99e-29!86;UBERON:0007284!1.99e-29!86;UBERON:0005743!1.36e-28!86;UBERON:0000073!1.96e-28!94;UBERON:0001016!1.96e-28!94;UBERON:0002780!8.20e-27!41;UBERON:0001890!8.20e-27!41;UBERON:0006240!8.20e-27!41;UBERON:0003080!8.62e-26!42;UBERON:0000153!8.06e-24!129;UBERON:0007811!8.06e-24!129;UBERON:0000033!2.42e-23!123;UBERON:0001893!6.75e-23!34;UBERON:0002020!7.68e-23!34;UBERON:0003528!7.68e-23!34;UBERON:0003056!3.74e-22!61;UBERON:0002791!6.11e-22!33;UBERON:0000924!1.78e-21!173;UBERON:0006601!1.78e-21!173;UBERON:0001869!4.42e-21!32;UBERON:0004121!1.14e-20!169;UBERON:0002619!6.42e-17!22;UBERON:0000956!1.32e-16!25;UBERON:0000203!1.32e-16!25;UBERON:0001950!4.20e-15!20;UBERON:0000475!6.48e-11!365;UBERON:0003076!4.38e-09!15;UBERON:0003057!4.38e-09!15;UBERON:0000477!1.41e-08!286;UBERON:0000481!2.04e-08!347;UBERON:0000064!2.24e-08!219;UBERON:0000119!2.33e-08!312;UBERON:0000025!2.76e-08!194;UBERON:0000483!4.48e-08!309;UBERON:0004111!6.17e-08!241;UBERON:0002308!1.03e-07!9;UBERON:0000125!1.03e-07!9;UBERON:0004732!1.03e-07!13;UBERON:0000922!1.22e-07!612;UBERON:0002420!1.46e-07!9;UBERON:0007245!1.46e-07!9;UBERON:0010009!1.46e-07!9;UBERON:0010011!1.46e-07!9;UBERON:0000454!1.46e-07!9;UBERON:0004733!7.02e-07!12;UBERON:0002028!7.02e-07!12;UBERON:0007277!7.02e-07!12;UBERON:0000200!7.80e-07!6 | |ontology_enrichment_uberon=UBERON:0001049!7.98e-34!57;UBERON:0005068!7.98e-34!57;UBERON:0006241!7.98e-34!57;UBERON:0007135!7.98e-34!57;UBERON:0007023!2.61e-31!115;UBERON:0002616!5.13e-31!59;UBERON:0000955!2.55e-30!69;UBERON:0006238!2.55e-30!69;UBERON:0002346!3.99e-30!90;UBERON:0001017!5.04e-30!82;UBERON:0003075!1.99e-29!86;UBERON:0007284!1.99e-29!86;UBERON:0005743!1.36e-28!86;UBERON:0000073!1.96e-28!94;UBERON:0001016!1.96e-28!94;UBERON:0002780!8.20e-27!41;UBERON:0001890!8.20e-27!41;UBERON:0006240!8.20e-27!41;UBERON:0003080!8.62e-26!42;UBERON:0000153!8.06e-24!129;UBERON:0007811!8.06e-24!129;UBERON:0000033!2.42e-23!123;UBERON:0001893!6.75e-23!34;UBERON:0002020!7.68e-23!34;UBERON:0003528!7.68e-23!34;UBERON:0003056!3.74e-22!61;UBERON:0002791!6.11e-22!33;UBERON:0000924!1.78e-21!173;UBERON:0006601!1.78e-21!173;UBERON:0001869!4.42e-21!32;UBERON:0004121!1.14e-20!169;UBERON:0002619!6.42e-17!22;UBERON:0000956!1.32e-16!25;UBERON:0000203!1.32e-16!25;UBERON:0001950!4.20e-15!20;UBERON:0000475!6.48e-11!365;UBERON:0003076!4.38e-09!15;UBERON:0003057!4.38e-09!15;UBERON:0000477!1.41e-08!286;UBERON:0000481!2.04e-08!347;UBERON:0000064!2.24e-08!219;UBERON:0000119!2.33e-08!312;UBERON:0000025!2.76e-08!194;UBERON:0000483!4.48e-08!309;UBERON:0004111!6.17e-08!241;UBERON:0002308!1.03e-07!9;UBERON:0000125!1.03e-07!9;UBERON:0004732!1.03e-07!13;UBERON:0000922!1.22e-07!612;UBERON:0002420!1.46e-07!9;UBERON:0007245!1.46e-07!9;UBERON:0010009!1.46e-07!9;UBERON:0010011!1.46e-07!9;UBERON:0000454!1.46e-07!9;UBERON:0004733!7.02e-07!12;UBERON:0002028!7.02e-07!12;UBERON:0007277!7.02e-07!12;UBERON:0000200!7.80e-07!6 | ||
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| ||
|short_description=p20@HMGB1 | |short_description=p20@HMGB1 | ||
}} | }} |
Latest revision as of 02:19, 17 September 2015
Short description: | p20@HMGB1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_HMGB1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -17bp_to_uc001usz.2_5end |
EntrezGene: | HMGB1 |
HGNC: | 4983 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data