FFCP PHASE1:Hg19::chr15:39873268..39873287,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7057 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11785 | |||
|TSSclassifier=strong | |||
|UniProt=A8MZG1,P07996 | |||
|association_with_transcript=0bp_to_ENST00000397591,NM_003246,uc001zkh.2_5end | |||
|cluster_id=chr15:39873268..39873287,+ | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_1_at_THBS1_5end | |||
|id=chr15:39873268..39873287,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.93e-22!180;CL:0000222!9.58e-19!119;CL:0000057!3.00e-18!75;CL:0002371!1.43e-17!591;CL:0000220!1.51e-14!246;CL:0002321!4.53e-14!248;CL:0000144!8.70e-14!625;CL:0000115!5.24e-13!35;CL:0002139!3.64e-12!24;CL:0002078!1.51e-11!44;CL:0000548!2.02e-11!679;CL:0000004!2.02e-11!679;CL:0000255!2.02e-11!679;CL:0000012!3.06e-11!682;CL:0000680!1.24e-09!57;CL:0000056!1.24e-09!57;CL:0000355!1.24e-09!57;CL:0000071!2.65e-09!18;CL:0002546!2.65e-09!18;CL:0000213!3.87e-09!57;CL:0000215!3.87e-09!57;CL:0000187!4.22e-09!54;CL:0000183!4.84e-09!59;CL:0000192!6.35e-09!42;CL:0000514!6.35e-09!42;CL:0000359!1.53e-08!32;CL:0002620!2.40e-08!23;CL:0000393!9.00e-08!60;CL:0000211!9.00e-08!60 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.51e-12;24!CL:0000115;2.30e-11;36!CL:0000071;2.58e-09;18!CL:0002620;2.33e-08;23!CL:0002078;4.02e-08;45!CL:0000359;4.83e-08;32!CL:0000057;1.53e-07;73!CL:0000349;8.66e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.44e-19,121;CL:0000057,7.23e-19,76;CL:0002321,1.76e-14,250;CL:0000115,2.28e-13,36;CL:0002139,3.51e-12,24;CL:0002078,6.71e-12,45;CL:0000680,1.61e-09,58;CL:0000056,1.61e-09,58;CL:0000355,1.61e-09,58;CL:0000213,1.87e-09,58;CL:0000215,1.87e-09,58;CL:0000071,2.58e-09,18;CL:0002546,2.58e-09,18;CL:0000187,5.46e-09,55;CL:0000192,8.86e-09,43;CL:0000514,8.86e-09,43;CL:0000359,1.50e-08,32;CL:0002620,2.35e-08,23;CL:0000393,1.08e-07,61;CL:0000211,1.08e-07,61;CL:0000349,8.68e-07,19 | |||
|ontology_enrichment_development_v019=CL:0002546;2.58e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.13e-22!659;UBERON:0002049!1.21e-21!79;UBERON:0007798!1.21e-21!79;UBERON:0004872!2.51e-21!84;UBERON:0000055!5.19e-21!69;UBERON:0004535!3.90e-20!110;UBERON:0001009!4.14e-20!113;UBERON:0000467!7.94e-20!625;UBERON:0000480!9.88e-20!626;UBERON:0003914!1.52e-18!118;UBERON:0001981!1.52e-18!60;UBERON:0007500!1.52e-18!60;UBERON:0004537!1.52e-18!60;UBERON:0006965!1.52e-18!60;UBERON:0000490!1.74e-14!138;UBERON:0000926!5.75e-14!448;UBERON:0004120!5.75e-14!448;UBERON:0006603!5.75e-14!448;UBERON:0001637!1.27e-13!42;UBERON:0003509!1.27e-13!42;UBERON:0004572!1.27e-13!42;UBERON:0002100!1.92e-12!216;UBERON:0005256!2.66e-12!143;UBERON:0003102!1.02e-11!95;UBERON:0000914!1.30e-11!83;UBERON:0002329!1.30e-11!83;UBERON:0003077!1.30e-11!83;UBERON:0003059!1.30e-11!83;UBERON:0007282!1.30e-11!83;UBERON:0009618!1.30e-11!83;UBERON:0007285!1.30e-11!83;UBERON:0000486!2.52e-11!82;UBERON:0004573!1.80e-10!33;UBERON:0004571!1.80e-10!33;UBERON:0003081!1.82e-10!216;UBERON:0000475!3.60e-10!365;UBERON:0000923!5.42e-10!604;UBERON:0005291!5.42e-10!604;UBERON:0006598!5.42e-10!604;UBERON:0002532!5.42e-10!604;UBERON:0002050!6.34e-10!605;UBERON:0005423!6.34e-10!605;UBERON:0004290!1.31e-09!70;UBERON:0002199!2.11e-09!45;UBERON:0002416!2.11e-09!45;UBERON:0001986!2.65e-09!18;UBERON:0004638!2.65e-09!18;UBERON:0004852!2.65e-09!18;UBERON:0000922!3.18e-09!612;UBERON:0000487!5.92e-09!22;UBERON:0001134!7.25e-09!61;UBERON:0002036!7.25e-09!61;UBERON:0003082!7.25e-09!61;UBERON:0002385!8.21e-09!63;UBERON:0001015!8.21e-09!63;UBERON:0000383!8.21e-09!63;UBERON:0002097!1.18e-08!40;UBERON:0000477!1.91e-08!286;UBERON:0000483!2.18e-08!309;UBERON:0000119!2.92e-08!312;UBERON:0006914!4.00e-08!25;UBERON:0004111!1.17e-07!241;UBERON:0004923!1.41e-07!57;UBERON:0000947!1.99e-07!21;UBERON:0010191!1.99e-07!21;UBERON:0003104!2.76e-07!238;UBERON:0009142!2.76e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.00e-10;42!UBERON:0003509;1.00e-10;42!UBERON:0004572;1.00e-10;42!UBERON:0000055;1.76e-10;65!UBERON:0007500;2.08e-10;56!UBERON:0001981;2.08e-10;56!UBERON:0004537;2.08e-10;56!UBERON:0004573;8.04e-10;33!UBERON:0004571;8.04e-10;33!UBERON:0004638;2.58e-09;18!UBERON:0001986;2.58e-09;18!UBERON:0004852;2.58e-09;18!UBERON:0000487;5.71e-09;22!UBERON:0002049;1.38e-08;75!UBERON:0007798;1.38e-08;75!UBERON:0006914;3.77e-08;25!UBERON:0003914;1.35e-07;74!UBERON:0000947;1.95e-07;21!UBERON:0010191;1.95e-07;21!UBERON:0002097;2.91e-07;41!UBERON:0000490;5.46e-07;33!UBERON:0002199;8.08e-07;46!UBERON:0002416;8.08e-07;46 | |||
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| |||
|short_description=p1@THBS1 | |||
}} |
Latest revision as of 10:07, 17 September 2015
Short description: | p1@THBS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_THBS1_5end |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | 0bp_to_ENST00000397591, NM_003246, uc001zkh.2_5end |
EntrezGene: | THBS1 |
HGNC: | 11785 |
UniProt: | A8MZG1P07996 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.44e-19 | 121 |
fibroblast | 7.23e-19 | 76 |
embryonic cell | 1.76e-14 | 250 |
endothelial cell | 2.28e-13 | 36 |
endothelial cell of vascular tree | 3.51e-12 | 24 |
meso-epithelial cell | 6.71e-12 | 45 |
muscle precursor cell | 1.61e-09 | 58 |
myoblast | 1.61e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.61e-09 | 58 |
lining cell | 1.87e-09 | 58 |
barrier cell | 1.87e-09 | 58 |
blood vessel endothelial cell | 2.58e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.58e-09 | 18 |
muscle cell | 5.46e-09 | 55 |
smooth muscle cell | 8.86e-09 | 43 |
smooth muscle myoblast | 8.86e-09 | 43 |
vascular associated smooth muscle cell | 1.50e-08 | 32 |
skin fibroblast | 2.35e-08 | 23 |
electrically responsive cell | 1.08e-07 | 61 |
electrically active cell | 1.08e-07 | 61 |
extraembryonic cell | 8.68e-07 | 19 |