FFCP PHASE1:Hg19::chr19:35773242..35773257,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:35773242..35773257,+ to FFCP PHASE1:Hg19::chr19:35773242..35773257,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57817 | |EntrezGene=57817 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15598 | |HGNC=15598 | ||
|TSSclassifier=strong | |||
|UniProt=P81172 | |UniProt=P81172 | ||
|association_with_transcript=-152bp_to_ENST00000222304,NM_021175,uc002nyw.2_5end | |||
|cluster_id=chr19:35773242..35773257,+ | |||
|coexpression_cluster_id=C71 | |||
|description=CAGE_peak_3_at_HAMP_5end | |||
|id=chr19:35773242..35773257,+ | |||
|ontology_enrichment_celltype=CL:0002194!1.23e-34!63;CL:0000576!1.23e-34!63;CL:0000040!1.23e-34!63;CL:0000559!1.23e-34!63;CL:0002009!3.60e-33!65;CL:0000839!7.06e-30!70;CL:0000557!2.82e-29!71;CL:0000766!5.06e-28!76;CL:0002057!1.42e-23!42;CL:0000860!2.07e-21!45;CL:0000763!7.58e-16!112;CL:0000049!7.58e-16!112;CL:0002087!5.97e-15!119;CL:0000738!2.27e-12!140;CL:0002031!2.64e-12!124;CL:0000037!5.82e-09!172;CL:0000566!5.82e-09!172;CL:0002032!4.03e-08!165;CL:0000837!4.03e-08!165;CL:0000988!7.84e-08!182;CL:0000235!7.56e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000235;8.21e-31;6!CL:0000473;2.95e-17;39!CL:0000234;2.95e-17;39!CL:0002619;1.91e-15;3!CL:0000766;2.50e-11;69!CL:0000576;1.93e-08;48!CL:0000860;2.25e-08;33!CL:0002057;2.25e-08;33!CL:0000840;9.78e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,4.47e-31,59;CL:0000576,4.47e-31,59;CL:0000040,4.47e-31,59;CL:0000559,4.47e-31,59;CL:0000235,7.88e-31,6;CL:0002009,6.49e-30,61;CL:0000839,2.58e-27,66;CL:0000557,7.68e-27,67;CL:0000766,1.15e-24,72;CL:0000473,9.82e-20,48;CL:0000234,9.82e-20,48;CL:0002619,1.69e-15,3;CL:0000763,6.44e-15,108;CL:0000049,6.44e-15,108;CL:0002087,9.95e-14,115;CL:0002031,5.77e-13,120;CL:0000738,6.70e-11,136;CL:0002032,1.66e-08,161;CL:0000837,1.66e-08,161;CL:0000037,5.75e-08,168;CL:0000860,1.17e-07,42;CL:0002057,1.17e-07,42;CL:0000840,1.34e-07,5;CL:0001029,1.34e-07,5;CL:0000988,2.45e-07,177 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.13e-07;3!UBERON:0003057;1.13e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.08e-42!115;UBERON:0001049!1.10e-32!57;UBERON:0005068!1.10e-32!57;UBERON:0006241!1.10e-32!57;UBERON:0007135!1.10e-32!57;UBERON:0002616!4.62e-27!59;UBERON:0002371!6.24e-26!80;UBERON:0003080!1.83e-25!42;UBERON:0002405!3.12e-24!115;UBERON:0000955!3.61e-24!69;UBERON:0006238!3.61e-24!69;UBERON:0002780!4.05e-24!41;UBERON:0001890!4.05e-24!41;UBERON:0006240!4.05e-24!41;UBERON:0001017!4.17e-24!82;UBERON:0005743!9.11e-24!86;UBERON:0001474!3.21e-23!86;UBERON:0002390!7.47e-23!102;UBERON:0003061!7.47e-23!102;UBERON:0002020!1.85e-21!34;UBERON:0003528!1.85e-21!34;UBERON:0003075!2.00e-21!86;UBERON:0007284!2.00e-21!86;UBERON:0001893!2.69e-21!34;UBERON:0002193!1.15e-20!112;UBERON:0000073!2.52e-20!94;UBERON:0001016!2.52e-20!94;UBERON:0002791!3.84e-20!33;UBERON:0002346!6.31e-20!90;UBERON:0004765!4.38e-19!101;UBERON:0001434!4.38e-19!101;UBERON:0001869!1.46e-18!32;UBERON:0003056!3.61e-16!61;UBERON:0002308!7.67e-15!9;UBERON:0000125!7.67e-15!9;UBERON:0000062!1.40e-14!511;UBERON:0000153!3.97e-13!129;UBERON:0007811!3.97e-13!129;UBERON:0002619!1.48e-12!22;UBERON:0000033!4.57e-12!123;UBERON:0009663!9.25e-12!7;UBERON:0002420!1.11e-11!9;UBERON:0007245!1.11e-11!9;UBERON:0010009!1.11e-11!9;UBERON:0010011!1.11e-11!9;UBERON:0000454!1.11e-11!9;UBERON:0002298!9.99e-11!8;UBERON:0000956!1.22e-10!25;UBERON:0000203!1.22e-10!25;UBERON:0001950!3.61e-10!20;UBERON:0000923!2.19e-09!604;UBERON:0005291!2.19e-09!604;UBERON:0006598!2.19e-09!604;UBERON:0002532!2.19e-09!604;UBERON:0002050!2.54e-09!605;UBERON:0005423!2.54e-09!605;UBERON:0000922!6.89e-09!612;UBERON:0000467!1.65e-08!625;UBERON:0000480!1.90e-08!626;UBERON:0003076!2.45e-08!15;UBERON:0003057!2.45e-08!15;UBERON:0000468!4.28e-08!659;UBERON:0004121!5.21e-08!169;UBERON:0000924!1.41e-07!173;UBERON:0006601!1.41e-07!173;UBERON:0002204!1.68e-07!167;UBERON:0000369!6.35e-07!4;UBERON:0002435!6.35e-07!4;UBERON:0000204!6.35e-07!4;UBERON:0010082!6.35e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.19e-12;53!UBERON:0002616;2.19e-12;53!UBERON:0001897;1.32e-10;2!UBERON:0010225;1.32e-10;2!UBERON:0001875;2.72e-10;2!UBERON:0006514;2.72e-10;2!UBERON:0002780;1.08e-09;41!UBERON:0001890;1.08e-09;41!UBERON:0000125;9.04e-09;9!UBERON:0002308;9.04e-09;9!UBERON:0002420;1.23e-08;9!UBERON:0007245;1.23e-08;9!UBERON:0010009;1.23e-08;9!UBERON:0010011;1.23e-08;9!UBERON:0000454;1.23e-08;9!UBERON:0002298;1.11e-07;6!UBERON:0002240;1.13e-07;3!UBERON:0005174;1.13e-07;3!UBERON:0001137;1.13e-07;3!UBERON:0001896;3.88e-07;3!UBERON:0005290;3.88e-07;3!UBERON:0001894;9.03e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.94e-23,76;UBERON:0001474,4.17e-21,82;UBERON:0001049,2.52e-20,56;UBERON:0005068,2.52e-20,56;UBERON:0006241,2.52e-20,56;UBERON:0007135,2.52e-20,56;UBERON:0004765,8.01e-19,90;UBERON:0002405,4.56e-18,93;UBERON:0002390,6.55e-17,98;UBERON:0003061,6.55e-17,98;UBERON:0001434,1.76e-16,100;UBERON:0000073,1.97e-16,53;UBERON:0002616,1.97e-16,53;UBERON:0002193,6.44e-15,108;UBERON:0001017,9.06e-13,81;UBERON:0003075,9.06e-13,82;UBERON:0007284,9.06e-13,82;UBERON:0002346,5.19e-12,86;UBERON:0000955,6.18e-12,68;UBERON:0006238,6.18e-12,68;UBERON:0002780,1.54e-11,41;UBERON:0001890,1.54e-11,41;UBERON:0003080,1.54e-11,41;UBERON:0006240,1.54e-11,41;UBERON:0001016,3.71e-11,89;UBERON:0003076,4.46e-11,15;UBERON:0003057,4.46e-11,15;UBERON:0001897,7.73e-11,2;UBERON:0010225,7.73e-11,2;UBERON:0007023,9.57e-11,114;UBERON:0001875,2.25e-10,2;UBERON:0006514,2.25e-10,2;UBERON:0010371,2.53e-09,104;UBERON:0000125,8.25e-09,9;UBERON:0002308,8.25e-09,9;UBERON:0002420,9.15e-09,9;UBERON:0007245,9.15e-09,9;UBERON:0010009,9.15e-09,9;UBERON:0010011,9.15e-09,9;UBERON:0000454,9.15e-09,9;UBERON:0002204,4.85e-08,167;UBERON:0002240,1.15e-07,3;UBERON:0005174,1.15e-07,3;UBERON:0001137,1.15e-07,3;UBERON:0002298,1.31e-07,6;UBERON:0003528,1.85e-07,34;UBERON:0002020,1.85e-07,34;UBERON:0001893,2.10e-07,34;UBERON:0003056,3.77e-07,61;UBERON:0001896,4.69e-07,3;UBERON:0005290,4.69e-07,3;UBERON:0010096,4.69e-07,3;UBERON:0001894,7.55e-07,7;UBERON:0006222,7.55e-07,7;UBERON:0009663,9.80e-07,7 | |||
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| ||
|short_description=p3@HAMP | |||
}} | }} |
Latest revision as of 11:20, 17 September 2015
Short description: | p3@HAMP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HAMP_5end |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | -152bp_to_ENST00000222304, NM_021175, uc002nyw.2_5end |
EntrezGene: | HAMP |
HGNC: | 15598 |
UniProt: | P81172 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 4.47e-31 | 59 |
monocyte | 4.47e-31 | 59 |
monoblast | 4.47e-31 | 59 |
promonocyte | 4.47e-31 | 59 |
macrophage | 7.88e-31 | 6 |
macrophage dendritic cell progenitor | 6.49e-30 | 61 |
myeloid lineage restricted progenitor cell | 2.58e-27 | 66 |
granulocyte monocyte progenitor cell | 7.68e-27 | 67 |
myeloid leukocyte | 1.15e-24 | 72 |
defensive cell | 9.82e-20 | 48 |
phagocyte | 9.82e-20 | 48 |
adult endothelial progenitor cell | 1.69e-15 | 3 |
myeloid cell | 6.44e-15 | 108 |
common myeloid progenitor | 6.44e-15 | 108 |
nongranular leukocyte | 9.95e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 5.77e-13 | 120 |
leukocyte | 6.70e-11 | 136 |
hematopoietic oligopotent progenitor cell | 1.66e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.66e-08 | 161 |
hematopoietic stem cell | 5.75e-08 | 168 |
classical monocyte | 1.17e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.17e-07 | 42 |
immature conventional dendritic cell | 1.34e-07 | 5 |
common dendritic progenitor | 1.34e-07 | 5 |
hematopoietic cell | 2.45e-07 | 177 |