FFCP PHASE1:Hg19::chr15:42696954..42696986,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:42696954..42696986,+ to FFCP PHASE1:Hg19::chr15:42696954..42696986,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=825 | |EntrezGene=825 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1480 | |HGNC=1480 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BQC8,P20807,A4FTZ9 | |UniProt=Q9BQC8,P20807,A4FTZ9 | ||
|association_with_transcript=0bp_to_ENST00000337571,ENST00000397204,NM_173089,NM_173090,uc001zpr.1,uc001zps.1,uc001zpt.1,uc010bcv.1_5end | |||
|cluster_id=chr15:42696954..42696986,+ | |||
|coexpression_cluster_id=C327 | |||
|description=CAGE_peak_1_at_CAPN3_5end | |||
|id=chr15:42696954..42696986,+ | |||
|ontology_enrichment_celltype=CL:0000147!1.37e-16!14;CL:0000148!2.67e-15!10;CL:0000541!2.67e-15!10;CL:0002274!1.24e-07!5;CL:0000457!1.24e-07!5;CL:0002191!1.24e-07!5;CL:0000097!1.24e-07!5;CL:0000831!1.24e-07!5;CL:0002028!1.24e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000148;3.42e-21;10!CL:0000147;2.95e-20;14!CL:0000097;3.23e-10;5!CL:0000710;2.18e-09;20!CL:0002567;2.70e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.81e-21,10;CL:0000541,3.81e-21,10;CL:0000147,3.44e-20,14;CL:0000097,3.20e-10,5;CL:0002028,3.20e-10,5;CL:0000710,2.29e-09,20;CL:0002567,2.70e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.31e-16;82!UBERON:0006241;1.06e-07;3!UBERON:0003057;1.06e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.36e-55!115;UBERON:0001049!1.38e-47!57;UBERON:0005068!1.38e-47!57;UBERON:0006241!1.38e-47!57;UBERON:0007135!1.38e-47!57;UBERON:0005743!3.54e-41!86;UBERON:0002616!1.83e-38!59;UBERON:0000073!2.49e-37!94;UBERON:0001016!2.49e-37!94;UBERON:0001017!3.35e-37!82;UBERON:0003075!1.75e-36!86;UBERON:0007284!1.75e-36!86;UBERON:0002780!8.46e-36!41;UBERON:0001890!8.46e-36!41;UBERON:0006240!8.46e-36!41;UBERON:0000955!1.64e-35!69;UBERON:0006238!1.64e-35!69;UBERON:0003080!1.12e-34!42;UBERON:0002346!4.52e-34!90;UBERON:0001893!1.10e-31!34;UBERON:0002020!1.22e-31!34;UBERON:0003528!1.22e-31!34;UBERON:0002791!2.63e-30!33;UBERON:0001869!9.63e-29!32;UBERON:0003056!2.99e-26!61;UBERON:0002619!3.32e-23!22;UBERON:0001950!1.12e-20!20;UBERON:0000956!9.84e-20!25;UBERON:0000203!9.84e-20!25;UBERON:0000033!5.22e-19!123;UBERON:0000153!5.37e-19!129;UBERON:0007811!5.37e-19!129;UBERON:0004121!1.17e-17!169;UBERON:0000924!7.85e-17!173;UBERON:0006601!7.85e-17!173;UBERON:0002308!4.78e-14!9;UBERON:0000125!4.78e-14!9;UBERON:0002420!1.18e-13!9;UBERON:0007245!1.18e-13!9;UBERON:0010009!1.18e-13!9;UBERON:0010011!1.18e-13!9;UBERON:0000454!1.18e-13!9;UBERON:0003076!1.18e-13!15;UBERON:0003057!1.18e-13!15;UBERON:0000025!1.73e-11!194;UBERON:0009663!3.66e-11!7;UBERON:0004732!4.42e-11!13;UBERON:0002298!3.51e-10!8;UBERON:0000062!4.00e-10!511;UBERON:0004733!9.82e-10!12;UBERON:0002028!9.82e-10!12;UBERON:0007277!9.82e-10!12;UBERON:0000200!1.31e-09!6;UBERON:0001871!6.36e-09!7;UBERON:0000483!8.28e-09!309;UBERON:0000119!1.54e-08!312;UBERON:0004111!2.02e-08!241;UBERON:0000349!4.41e-08!5;UBERON:0000064!2.73e-07!219;UBERON:0000922!6.27e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.22e-39;34!UBERON:0003528;2.55e-38;34!UBERON:0002020;2.55e-38;34!UBERON:0002791;2.18e-37;32!UBERON:0001869;2.72e-37;32!UBERON:0002780;8.45e-37;41!UBERON:0001890;8.45e-37;41!UBERON:0000073;4.23e-35;53!UBERON:0002616;4.23e-35;53!UBERON:0002619;4.39e-33;22!UBERON:0001950;1.85e-29;20!UBERON:0000956;1.45e-28;25!UBERON:0000203;1.45e-28;25!UBERON:0000955;3.31e-24;68!UBERON:0001017;6.77e-24;75!UBERON:0000125;2.31e-19;9!UBERON:0002308;2.31e-19;9!UBERON:0001016;4.24e-19;83!UBERON:0002420;8.35e-19;9!UBERON:0007245;8.35e-19;9!UBERON:0010009;8.35e-19;9!UBERON:0010011;8.35e-19;9!UBERON:0000454;8.35e-19;9!UBERON:0004732;1.16e-15;13!UBERON:0009663;3.00e-15;7!UBERON:0007023;2.55e-14;114!UBERON:0002298;4.36e-14;6!UBERON:0004733;9.96e-14;12!UBERON:0002028;9.96e-14;12!UBERON:0000200;4.95e-13;6!UBERON:0000349;7.40e-11;5!UBERON:0001871;1.76e-10;6!UBERON:0011216;2.70e-09;132!UBERON:0000369;6.25e-09;4!UBERON:0002435;6.25e-09;4!UBERON:0000204;6.25e-09;4!UBERON:0002784;7.55e-09;4!UBERON:0002680;2.96e-08;9!UBERON:0001895;2.96e-08;9!UBERON:0000988;7.03e-08;3!UBERON:0001896;7.03e-08;3!UBERON:0005290;7.03e-08;3!UBERON:0002240;1.06e-07;3!UBERON:0005174;1.06e-07;3!UBERON:0001137;1.06e-07;3!UBERON:0001894;1.11e-07;7!UBERON:0001872;1.39e-07;5!UBERON:0002021;2.23e-07;5!UBERON:0001870;3.18e-07;3!UBERON:0005383;6.05e-07;3!UBERON:0005382;6.05e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.95e-71,56;UBERON:0005068,3.95e-71,56;UBERON:0006241,3.95e-71,56;UBERON:0007135,3.95e-71,56;UBERON:0000073,4.97e-65,53;UBERON:0002616,4.97e-65,53;UBERON:0000955,8.18e-55,68;UBERON:0006238,8.18e-55,68;UBERON:0001017,1.08e-53,81;UBERON:0003075,1.75e-53,82;UBERON:0007284,1.75e-53,82;UBERON:0002780,5.24e-52,41;UBERON:0001890,5.24e-52,41;UBERON:0003080,5.24e-52,41;UBERON:0006240,5.24e-52,41;UBERON:0002346,2.52e-50,86;UBERON:0001016,2.40e-49,89;UBERON:0001893,9.25e-46,34;UBERON:0007023,1.08e-45,114;UBERON:0003528,1.08e-45,34;UBERON:0002020,1.08e-45,34;UBERON:0010371,3.87e-43,104;UBERON:0002791,1.18e-41,32;UBERON:0001869,1.61e-41,32;UBERON:0003056,1.13e-40,61;UBERON:0002619,4.68e-33,22;UBERON:0010314,1.20e-30,132;UBERON:0001950,1.97e-29,20;UBERON:0000956,1.54e-28,25;UBERON:0000203,1.54e-28,25;UBERON:0004121,1.34e-24,171;UBERON:0000924,1.34e-24,171;UBERON:0006601,1.34e-24,171;UBERON:0011216,3.96e-22,223;UBERON:0003076,2.32e-19,15;UBERON:0003057,2.32e-19,15;UBERON:0000125,2.34e-19,9;UBERON:0002308,2.34e-19,9;UBERON:0002420,8.44e-19,9;UBERON:0007245,8.44e-19,9;UBERON:0010009,8.44e-19,9;UBERON:0010011,8.44e-19,9;UBERON:0000454,8.44e-19,9;UBERON:0004732,1.15e-15,13;UBERON:0000025,1.64e-15,192;UBERON:0009663,3.03e-15,7;UBERON:0002298,4.36e-14,6;UBERON:0004733,9.96e-14,12;UBERON:0002028,9.96e-14,12;UBERON:0007277,9.96e-14,12;UBERON:0000200,4.95e-13,6;UBERON:0004111,5.28e-11,240;UBERON:0000349,7.41e-11,5;UBERON:0001871,1.91e-10,6;UBERON:0000483,3.82e-10,306;UBERON:0000119,6.64e-10,309;UBERON:0000369,6.32e-09,4;UBERON:0002435,6.32e-09,4;UBERON:0000204,6.32e-09,4;UBERON:0010082,6.32e-09,4;UBERON:0002784,7.63e-09,4;UBERON:0002680,2.97e-08,9;UBERON:0001895,2.97e-08,9;UBERON:0010092,2.97e-08,9;UBERON:0000988,7.04e-08,3;UBERON:0001896,7.04e-08,3;UBERON:0005290,7.04e-08,3;UBERON:0010096,7.04e-08,3;UBERON:0002240,1.07e-07,3;UBERON:0005174,1.07e-07,3;UBERON:0001137,1.07e-07,3;UBERON:0001894,1.12e-07,7;UBERON:0006222,1.12e-07,7;UBERON:0001872,1.38e-07,5;UBERON:0002021,2.25e-07,5;UBERON:0001870,3.12e-07,3;UBERON:0005383,6.11e-07,3;UBERON:0005382,6.11e-07,3 | |||
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| ||
|short_description=p1@CAPN3 | |||
}} | }} |
Latest revision as of 16:02, 17 September 2015
Short description: | p1@CAPN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CAPN3_5end |
Coexpression cluster: | C327_Melanocyte_corpus_thalamus_substantia_melanoma_globus_optic |
Association with transcript: | 0bp_to_ENST00000337571, ENST00000397204, NM_173089, NM_173090, uc001zpr.1, uc001zps.1, uc001zpt.1, uc010bcv.1_5end |
EntrezGene: | CAPN3 |
HGNC: | 1480 |
UniProt: | Q9BQC8P20807A4FTZ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.81e-21 | 10 |
melanoblast | 3.81e-21 | 10 |
pigment cell | 3.44e-20 | 14 |
mast cell | 3.20e-10 | 5 |
basophil mast progenitor cell | 3.20e-10 | 5 |
neurecto-epithelial cell | 2.29e-09 | 20 |
light melanocyte | 2.70e-08 | 3 |