FFCP PHASE1:Hg19::chr19:38085768..38085821,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=163255 | |EntrezGene=163255 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25331 | |HGNC=25331 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002ogu.2,uc010efq.2_5end | |association_with_transcript=0bp_to_uc002ogu.2,uc010efq.2_5end | ||
|cluster_id=chr19:38085768..38085821,+ | |||
|coexpression_cluster_id=C652 | |||
|description=CAGE_peak_1_at_ZNF540_5end | |description=CAGE_peak_1_at_ZNF540_5end | ||
|id=chr19:38085768..38085821,+ | |id=chr19:38085768..38085821,+ | ||
|ontology_enrichment_celltype=CL:0000838!4.66e-09!52;CL:0000542!7.00e-09!53;CL:0000051!7.00e-09!53;CL:0000791!1.72e-08!18;CL:0000789!1.72e-08!18;CL:0002420!1.72e-08!18;CL:0002419!1.72e-08!18;CL:0000790!1.72e-08!18;CL:0000625!3.42e-07!11 | |ontology_enrichment_celltype=CL:0000838!4.66e-09!52;CL:0000542!7.00e-09!53;CL:0000051!7.00e-09!53;CL:0000791!1.72e-08!18;CL:0000789!1.72e-08!18;CL:0002420!1.72e-08!18;CL:0002419!1.72e-08!18;CL:0000790!1.72e-08!18;CL:0000625!3.42e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.32e-11;18!CL:0000789;4.32e-11;18!CL:0002419;4.32e-11;18!CL:0000625;5.69e-09;11!CL:0000084;3.21e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.08e-11,18;CL:0000789,4.08e-11,18;CL:0002420,4.08e-11,18;CL:0002419,4.08e-11,18;CL:0000790,4.08e-11,18;CL:0000838,7.29e-10,52;CL:0000542,1.91e-09,53;CL:0000051,1.91e-09,53;CL:0000625,6.04e-09,11;CL:0000084,2.19e-08,25;CL:0000827,2.19e-08,25 | |||
|ontology_enrichment_development_v019=CL:0000790;4.32e-11;18!UBERON:0006601;7.60e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.10e-51!115;UBERON:0001049!2.56e-30!57;UBERON:0005068!2.56e-30!57;UBERON:0006241!2.56e-30!57;UBERON:0007135!2.56e-30!57;UBERON:0002616!1.26e-25!59;UBERON:0001017!1.56e-25!82;UBERON:0003080!7.75e-25!42;UBERON:0002780!1.25e-24!41;UBERON:0001890!1.25e-24!41;UBERON:0006240!1.25e-24!41;UBERON:0000955!8.73e-24!69;UBERON:0006238!8.73e-24!69;UBERON:0005743!1.65e-23!86;UBERON:0000073!7.72e-22!94;UBERON:0001016!7.72e-22!94;UBERON:0001893!3.22e-20!34;UBERON:0002020!3.47e-20!34;UBERON:0003528!3.47e-20!34;UBERON:0002791!1.50e-19!33;UBERON:0001869!4.51e-19!32;UBERON:0003075!1.03e-18!86;UBERON:0007284!1.03e-18!86;UBERON:0002346!5.02e-18!90;UBERON:0002619!2.15e-15!22;UBERON:0000956!1.50e-14!25;UBERON:0000203!1.50e-14!25;UBERON:0001950!3.51e-14!20;UBERON:0003056!2.49e-13!61;UBERON:0000153!5.35e-12!129;UBERON:0007811!5.35e-12!129;UBERON:0000033!4.26e-11!123;UBERON:0004121!4.62e-10!169;UBERON:0000924!6.67e-10!173;UBERON:0006601!6.67e-10!173;UBERON:0002420!2.77e-07!9;UBERON:0007245!2.77e-07!9;UBERON:0010009!2.77e-07!9;UBERON:0010011!2.77e-07!9;UBERON:0000454!2.77e-07!9;UBERON:0002308!3.81e-07!9;UBERON:0000125!3.81e-07!9;UBERON:0003076!8.21e-07!15;UBERON:0003057!8.21e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.50e-22;41!UBERON:0001890;7.50e-22;41!UBERON:0001893;6.44e-21;34!UBERON:0003528;7.43e-21;34!UBERON:0002020;7.43e-21;34!UBERON:0001869;9.83e-21;32!UBERON:0002791;1.07e-20;32!UBERON:0000073;5.01e-20;53!UBERON:0002616;5.01e-20;53!UBERON:0002619;1.03e-19;22!UBERON:0001950;4.01e-18;20!UBERON:0000956;3.34e-17;25!UBERON:0000203;3.34e-17;25!UBERON:0007023;1.40e-16;114!UBERON:0001017;1.78e-12;75!UBERON:0000955;2.72e-12;68!UBERON:0001016;8.23e-11;83!UBERON:0002420;4.44e-09;9!UBERON:0007245;4.44e-09;9!UBERON:0010009;4.44e-09;9!UBERON:0010011;4.44e-09;9!UBERON:0000454;4.44e-09;9!UBERON:0000125;6.72e-09;9!UBERON:0002308;6.72e-09;9!UBERON:0009663;1.94e-07;7!UBERON:0001894;3.41e-07;7 | |||
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| ||
|short_description=p1@ZNF540 | |short_description=p1@ZNF540 | ||
}} | }} |
Latest revision as of 18:16, 17 September 2015
Short description: | p1@ZNF540 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF540_5end |
Coexpression cluster: | C652_cerebellum_occipital_pineal_pituitary_medial_parietal_amygdala |
Association with transcript: | 0bp_to_uc002ogu.2, uc010efq.2_5end |
EntrezGene: | ZNF540 |
HGNC: | 25331 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.08e-11 | 18 |
alpha-beta T cell | 4.08e-11 | 18 |
immature T cell | 4.08e-11 | 18 |
mature T cell | 4.08e-11 | 18 |
immature alpha-beta T cell | 4.08e-11 | 18 |
lymphoid lineage restricted progenitor cell | 7.29e-10 | 52 |
lymphocyte | 1.91e-09 | 53 |
common lymphoid progenitor | 1.91e-09 | 53 |
CD8-positive, alpha-beta T cell | 6.04e-09 | 11 |
T cell | 2.19e-08 | 25 |
pro-T cell | 2.19e-08 | 25 |