FFCP PHASE1:Hg19::chr5:36607050..36607061,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:36607050..36607061,+ to FFCP PHASE1:Hg19::chr5:36607050..36607061,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6507 | |EntrezGene=6507 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10941 | |HGNC=10941 | ||
|TSSclassifier=strong | |||
|UniProt=E7EUV6 | |UniProt=E7EUV6 | ||
|association_with_transcript=58bp_to_ENST00000505202_5end | |||
|cluster_id=chr5:36607050..36607061,+ | |||
|description=CAGE_peak_11_at_SLC1A3_5end | |||
|id=chr5:36607050..36607061,+ | |||
|ontology_enrichment_celltype=CL:0002605!8.48e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000047;4.83e-18;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.41e-10,8 | |||
|ontology_enrichment_development_v019=UBERON:0006241;4.97e-12;3!UBERON:0006215;4.97e-12;3!UBERON:0003057;4.97e-12;3!UBERON:0006601;8.74e-12;82!UBERON:0006222;1.20e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.33e-67!57;UBERON:0005068!6.33e-67!57;UBERON:0006241!6.33e-67!57;UBERON:0007135!6.33e-67!57;UBERON:0002616!2.39e-60!59;UBERON:0001017!1.60e-54!82;UBERON:0000955!1.11e-51!69;UBERON:0006238!1.11e-51!69;UBERON:0005743!2.19e-51!86;UBERON:0002780!2.85e-50!41;UBERON:0001890!2.85e-50!41;UBERON:0006240!2.85e-50!41;UBERON:0002020!4.08e-50!34;UBERON:0003528!4.08e-50!34;UBERON:0001893!6.94e-50!34;UBERON:0003080!7.22e-49!42;UBERON:0002791!6.10e-48!33;UBERON:0001869!1.55e-45!32;UBERON:0000073!2.79e-45!94;UBERON:0001016!2.79e-45!94;UBERON:0003075!3.53e-42!86;UBERON:0007284!3.53e-42!86;UBERON:0002346!9.67e-40!90;UBERON:0000956!6.08e-35!25;UBERON:0000203!6.08e-35!25;UBERON:0003056!7.44e-33!61;UBERON:0000033!1.48e-32!123;UBERON:0000153!2.03e-30!129;UBERON:0007811!2.03e-30!129;UBERON:0007023!2.70e-30!115;UBERON:0002619!5.11e-29!22;UBERON:0004121!4.43e-25!169;UBERON:0001950!5.49e-25!20;UBERON:0000924!3.57e-24!173;UBERON:0006601!3.57e-24!173;UBERON:0003076!2.26e-18!15;UBERON:0003057!2.26e-18!15;UBERON:0002308!1.62e-16!9;UBERON:0000125!1.62e-16!9;UBERON:0002420!3.12e-16!9;UBERON:0007245!3.12e-16!9;UBERON:0010009!3.12e-16!9;UBERON:0010011!3.12e-16!9;UBERON:0000454!3.12e-16!9;UBERON:0004733!1.26e-15!12;UBERON:0002028!1.26e-15!12;UBERON:0007277!1.26e-15!12;UBERON:0002298!1.03e-14!8;UBERON:0004732!2.91e-14!13;UBERON:0000200!1.63e-13!6;UBERON:0000025!1.08e-12!194;UBERON:0009663!3.61e-12!7;UBERON:0000349!4.22e-12!5;UBERON:0000064!1.89e-11!219;UBERON:0001871!5.74e-10!7;UBERON:0004111!8.08e-10!241;UBERON:0000475!1.00e-09!365;UBERON:0002680!1.14e-09!9;UBERON:0001895!1.14e-09!9;UBERON:0010092!1.14e-09!9;UBERON:0000119!2.30e-08!312;UBERON:0006331!2.68e-08!3;UBERON:0000988!2.88e-08!3;UBERON:0001896!2.88e-08!3;UBERON:0005290!2.88e-08!3;UBERON:0010096!2.88e-08!3;UBERON:0002021!4.07e-08!5;UBERON:0000483!4.63e-08!309;UBERON:0000477!4.87e-08!286;UBERON:0002771!1.92e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.15e-27;53!UBERON:0002616;1.15e-27;53!UBERON:0004733;2.20e-24;12!UBERON:0002028;2.20e-24;12!UBERON:0000125;4.19e-23;9!UBERON:0002308;4.19e-23;9!UBERON:0004732;1.76e-22;13!UBERON:0002298;2.55e-22;6!UBERON:0002780;8.68e-21;41!UBERON:0001890;8.68e-21;41!UBERON:0001897;4.83e-18;2!UBERON:0010225;4.83e-18;2!UBERON:0001875;5.72e-18;2!UBERON:0006514;5.72e-18;2!UBERON:0001016;7.07e-18;83!UBERON:0001017;1.38e-17;75!UBERON:0002148;1.45e-17;2!UBERON:0006331;1.45e-17;2!UBERON:0009662;1.45e-17;2!UBERON:0003528;2.34e-17;34!UBERON:0002020;2.34e-17;34!UBERON:0001893;2.40e-15;34!UBERON:0002420;3.82e-15;9!UBERON:0007245;3.82e-15;9!UBERON:0010009;3.82e-15;9!UBERON:0010011;3.82e-15;9!UBERON:0000454;3.82e-15;9!UBERON:0002680;5.72e-15;9!UBERON:0001895;5.72e-15;9!UBERON:0000955;2.02e-14;68!UBERON:0002791;3.26e-14;32!UBERON:0000988;4.97e-12;3!UBERON:0001896;4.97e-12;3!UBERON:0002240;4.97e-12;3!UBERON:0005174;4.97e-12;3!UBERON:0005290;4.97e-12;3!UBERON:0001137;4.97e-12;3!UBERON:0001894;1.90e-11;7!UBERON:0009663;2.04e-11;7!UBERON:0001869;2.41e-11;32!UBERON:0002336;1.20e-09;1!UBERON:0002038;1.20e-09;1!UBERON:0003112;1.20e-09;1!UBERON:0011215;1.20e-09;1!UBERON:0001018;1.20e-09;1!UBERON:0011158;1.20e-09;1!UBERON:0009661;1.20e-09;1!UBERON:0002950;1.20e-09;1!UBERON:0002473;1.20e-09;1!UBERON:0005340;1.20e-09;1!UBERON:0003544;1.20e-09;1!UBERON:0005970;1.20e-09;1!UBERON:0002316;1.20e-09;1!UBERON:0001020;1.20e-09;1!UBERON:0003128;1.20e-09;1!UBERON:0001891;1.20e-09;1!UBERON:0002437;1.20e-09;1!UBERON:0001703;1.20e-09;1!UBERON:0002241;1.20e-09;1!UBERON:0002784;1.76e-09;4!UBERON:0007023;1.45e-08;114!UBERON:0000956;6.57e-08;25!UBERON:0000203;6.57e-08;25!UBERON:0000349;1.01e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.60e-55,56;UBERON:0005068,5.60e-55,56;UBERON:0006241,5.60e-55,56;UBERON:0007135,5.60e-55,56;UBERON:0001017,1.15e-49,81;UBERON:0000073,1.02e-46,53;UBERON:0002616,1.02e-46,53;UBERON:0001016,1.74e-44,89;UBERON:0003075,9.01e-37,82;UBERON:0007284,9.01e-37,82;UBERON:0000955,2.29e-35,68;UBERON:0006238,2.29e-35,68;UBERON:0002346,6.19e-35,86;UBERON:0003076,2.89e-34,15;UBERON:0003057,2.89e-34,15;UBERON:0010371,2.15e-28,104;UBERON:0002780,1.44e-26,41;UBERON:0001890,1.44e-26,41;UBERON:0003080,1.44e-26,41;UBERON:0006240,1.44e-26,41;UBERON:0007023,6.98e-26,114;UBERON:0004733,2.41e-24,12;UBERON:0002028,2.41e-24,12;UBERON:0007277,2.41e-24,12;UBERON:0010314,3.65e-24,132;UBERON:0000125,6.53e-23,9;UBERON:0002308,6.53e-23,9;UBERON:0004732,1.91e-22,13;UBERON:0003528,2.99e-22,34;UBERON:0002020,2.99e-22,34;UBERON:0002298,3.78e-22,6;UBERON:0004121,6.48e-22,171;UBERON:0000924,6.48e-22,171;UBERON:0006601,6.48e-22,171;UBERON:0001875,3.76e-18,2;UBERON:0006514,3.76e-18,2;UBERON:0001893,4.56e-18,34;UBERON:0001897,8.08e-18,2;UBERON:0010225,8.08e-18,2;UBERON:0011216,1.18e-17,223;UBERON:0002148,2.22e-17,2;UBERON:0006331,2.22e-17,2;UBERON:0009662,2.22e-17,2;UBERON:0003056,2.36e-17,61;UBERON:0002791,3.11e-15,32;UBERON:0002420,3.20e-15,9;UBERON:0007245,3.20e-15,9;UBERON:0010009,3.20e-15,9;UBERON:0010011,3.20e-15,9;UBERON:0000454,3.20e-15,9;UBERON:0002680,5.74e-15,9;UBERON:0001895,5.74e-15,9;UBERON:0010092,5.74e-15,9;UBERON:0000025,6.26e-14,192;UBERON:0002240,3.57e-12,3;UBERON:0005174,3.57e-12,3;UBERON:0001137,3.57e-12,3;UBERON:0001896,5.58e-12,3;UBERON:0005290,5.58e-12,3;UBERON:0010096,5.58e-12,3;UBERON:0000988,6.59e-12,3;UBERON:0001869,8.26e-12,32;UBERON:0009663,2.40e-11,7;UBERON:0001894,2.67e-11,7;UBERON:0006222,2.67e-11,7;UBERON:0004111,1.80e-10,240;UBERON:0002336,1.15e-09,1;UBERON:0011215,1.15e-09,1;UBERON:0001018,1.15e-09,1;UBERON:0002473,1.15e-09,1;UBERON:0005340,1.15e-09,1;UBERON:0003544,1.15e-09,1;UBERON:0005970,1.15e-09,1;UBERON:0002316,1.15e-09,1;UBERON:0001020,1.15e-09,1;UBERON:0002437,1.15e-09,1;UBERON:0003112,2.26e-09,1;UBERON:0011158,2.26e-09,1;UBERON:0003128,2.26e-09,1;UBERON:0001703,2.26e-09,1;UBERON:0002241,2.26e-09,1;UBERON:0004761,2.26e-09,1;UBERON:0009617,2.26e-09,1;UBERON:0002784,2.27e-09,4;UBERON:0002038,2.67e-09,1;UBERON:0009661,2.67e-09,1;UBERON:0002950,2.67e-09,1;UBERON:0001891,2.67e-09,1;UBERON:0009616,2.67e-09,1;UBERON:0010286,2.67e-09,1;UBERON:0000956,5.79e-08,25;UBERON:0000203,5.79e-08,25;UBERON:0000349,7.46e-08,5;UBERON:0000483,1.81e-07,306;UBERON:0000119,2.32e-07,309 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14494394852423,0.410623275218653,0.502170558379211,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0.645484683583826,0,0,0,0,0.306083892370903,0,0,0.329851300186716,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0.23486899728753,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.468008530278475,0.148631162288728,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30323011489202,1.30139853857622,0,1.67516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,1.52581736317083,1.21637185924347,0.886642856860642,0,0,0,0,0,0,0.179515288819544,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.313265848516366,1.28062152663286,0,1.1713222286267,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379864775735272,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,1.36905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,0.408610218334727,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0342636508924,1.3223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.732157589411779,0.3755727921195,1.14681839138014,0.776503360757966,1.30402446176905,0,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,1.41696576325585,0.798169295285756,0.615349092722265,0,0.553258019713743,1.13032951942296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0,1.2401207790071,0.443910671357348,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.815636795721981,0.526182188502793,0,0,0,0.785577949580009,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96308467114945,1.18818560130834,0,0,0,0,0,0,0,0,0,0,1.00337708206016,0,0.475940431336403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31667775783512,1.13776295448085,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14494394852423,0.410623275218653,0.502170558379211,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0.645484683583826,0,0,0,0,0.306083892370903,0,0,0.329851300186716,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0.23486899728753,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.468008530278475,0.148631162288728,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30323011489202,1.30139853857622,0,1.67516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,1.52581736317083,1.21637185924347,0.886642856860642,0,0,0,0,0,0,0.179515288819544,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.313265848516366,1.28062152663286,0,1.1713222286267,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379864775735272,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,1.36905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,0.408610218334727,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0342636508924,1.3223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.732157589411779,0.3755727921195,1.14681839138014,0.776503360757966,1.30402446176905,0,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,1.41696576325585,0.798169295285756,0.615349092722265,0,0.553258019713743,1.13032951942296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0,1.2401207790071,0.443910671357348,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.815636795721981,0.526182188502793,0,0,0,0.785577949580009,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96308467114945,1.18818560130834,0,0,0,0,0,0,0,0,0,0,1.00337708206016,0,0.475940431336403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31667775783512,1.13776295448085,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | ||
|short_description=p11@SLC1A3 | |||
}} | }} |
Latest revision as of 19:20, 17 September 2015
Short description: | p11@SLC1A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SLC1A3_5end |
Coexpression cluster: | NA |
Association with transcript: | 58bp_to_ENST00000505202_5end |
EntrezGene: | SLC1A3 |
HGNC: | 10941 |
UniProt: | E7EUV6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.41e-10 | 8 |