FFCP PHASE1:Hg19::chr7:23387403..23387438,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10643 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28868 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000467592,ENST00000480547,ENST00000497563_5end | |||
|cluster_id=chr7:23387403..23387438,- | |||
|coexpression_cluster_id=C4676 | |||
|description=CAGE_peak_3_at_IGF2BP3_5end | |||
|id=chr7:23387403..23387438,- | |||
|ontology_enrichment_celltype=CL:0000222!4.47e-15!119;CL:0000012!5.88e-15!682;CL:0000548!6.15e-14!679;CL:0000004!6.15e-14!679;CL:0000255!6.15e-14!679;CL:0000003!2.42e-13!722;CL:0000144!3.69e-13!625;CL:0000213!2.99e-11!57;CL:0000215!2.99e-11!57;CL:0002371!1.29e-10!591;CL:0002139!2.36e-10!24;CL:0000115!3.10e-10!35;CL:0000359!4.93e-09!32;CL:0000192!5.89e-09!42;CL:0000514!5.89e-09!42;CL:0000071!6.06e-09!18;CL:0002546!6.06e-09!18;CL:0000220!8.14e-09!246;CL:0000055!9.87e-09!180;CL:0002321!2.29e-08!248;CL:0000076!6.43e-08!62;CL:0002194!1.64e-07!63;CL:0000576!1.64e-07!63;CL:0000040!1.64e-07!63;CL:0000559!1.64e-07!63;CL:0002078!4.56e-07!44;CL:1000413!9.81e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;8.42e-12;24!CL:0000115;1.56e-11;36!CL:0000071;2.07e-10;18!CL:0000359;3.46e-09;32!CL:0000213;2.70e-08;58!CL:0000215;2.70e-08;58!CL:1000413;6.32e-08;9!CL:0002539;1.73e-07;10!CL:0000473;4.55e-07;39!CL:0000234;4.55e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.82e-16,121;CL:0000213,1.78e-14,58;CL:0000215,1.78e-14,58;CL:0000115,5.76e-13,36;CL:0002139,1.25e-11,24;CL:0000071,2.01e-10,18;CL:0002546,2.01e-10,18;CL:0000359,8.95e-10,32;CL:0002078,9.41e-10,45;CL:0002321,2.14e-08,250;CL:1000413,6.33e-08,9;CL:0000473,1.28e-07,48;CL:0000234,1.28e-07,48;CL:0000192,1.66e-07,43;CL:0000514,1.66e-07,43;CL:0002539,1.67e-07,10;CL:0000076,4.63e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;2.07e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;7.98e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.85e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004535!2.95e-23!110;UBERON:0001009!6.50e-22!113;UBERON:0002049!1.23e-18!79;UBERON:0007798!1.23e-18!79;UBERON:0001637!2.72e-16!42;UBERON:0003509!2.72e-16!42;UBERON:0004572!2.72e-16!42;UBERON:0001981!4.49e-15!60;UBERON:0007500!4.49e-15!60;UBERON:0004537!4.49e-15!60;UBERON:0006965!4.49e-15!60;UBERON:0000055!1.26e-14!69;UBERON:0003081!3.31e-14!216;UBERON:0004872!1.44e-13!84;UBERON:0004573!4.83e-13!33;UBERON:0004571!4.83e-13!33;UBERON:0000947!8.93e-10!21;UBERON:0010191!8.93e-10!21;UBERON:0000926!2.05e-09!448;UBERON:0004120!2.05e-09!448;UBERON:0006603!2.05e-09!448;UBERON:0002204!5.91e-09!167;UBERON:0001986!6.06e-09!18;UBERON:0004638!6.06e-09!18;UBERON:0004852!6.06e-09!18;UBERON:0000467!1.33e-08!625;UBERON:0000480!2.05e-08!626;UBERON:0000487!1.14e-07!22;UBERON:0003914!1.79e-07!118;UBERON:0002193!2.43e-07!112;UBERON:0000914!5.58e-07!83;UBERON:0002329!5.58e-07!83;UBERON:0003077!5.58e-07!83;UBERON:0003059!5.58e-07!83;UBERON:0007282!5.58e-07!83;UBERON:0009618!5.58e-07!83;UBERON:0007285!5.58e-07!83;UBERON:0002390!6.80e-07!102;UBERON:0003061!6.80e-07!102;UBERON:0000923!6.80e-07!604;UBERON:0005291!6.80e-07!604;UBERON:0006598!6.80e-07!604;UBERON:0002532!6.80e-07!604;UBERON:0003915!9.81e-07!9;UBERON:0004700!9.81e-07!9;UBERON:0001917!9.81e-07!9;UBERON:0002050!9.95e-07!605;UBERON:0005423!9.95e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;6.17e-14;33!UBERON:0004571;6.17e-14;33!UBERON:0001637;2.16e-12;42!UBERON:0003509;2.16e-12;42!UBERON:0004572;2.16e-12;42!UBERON:0000947;1.60e-10;21!UBERON:0010191;1.60e-10;21!UBERON:0004638;2.07e-10;18!UBERON:0001986;2.07e-10;18!UBERON:0004852;2.07e-10;18!UBERON:0007500;8.54e-10;56!UBERON:0001981;8.54e-10;56!UBERON:0004537;8.54e-10;56!UBERON:0000487;2.21e-09;22!UBERON:0002049;4.64e-09;75!UBERON:0007798;4.64e-09;75!UBERON:0000055;8.57e-09;65!UBERON:0003915;6.32e-08;9!UBERON:0004700;6.32e-08;9!UBERON:0001917;6.32e-08;9!UBERON:0007625;7.71e-08;11!UBERON:0004535;8.90e-08;109!UBERON:0004237;1.73e-07;10!UBERON:0004695;1.73e-07;10!UBERON:0002111;1.73e-07;10!UBERON:0004178;1.73e-07;10!UBERON:0006914;2.22e-07;25!UBERON:0000490;3.01e-07;33!UBERON:0001009;4.18e-07;112 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,2.36e-25,109;UBERON:0001009,8.68e-24,112;UBERON:0002049,6.65e-20,78;UBERON:0007798,6.65e-20,78;UBERON:0001637,1.53e-17,42;UBERON:0003509,1.53e-17,42;UBERON:0004572,1.53e-17,42;UBERON:0003081,4.11e-17,203;UBERON:0000926,5.39e-16,315;UBERON:0004120,5.39e-16,315;UBERON:0006603,5.39e-16,315;UBERON:0007500,5.47e-16,59;UBERON:0001981,5.47e-16,59;UBERON:0004537,5.47e-16,59;UBERON:0006965,5.47e-16,59;UBERON:0000055,7.68e-16,68;UBERON:0004573,6.08e-15,33;UBERON:0004571,6.08e-15,33;UBERON:0004872,2.02e-13,83;UBERON:0000947,1.36e-10,21;UBERON:0010191,1.36e-10,21;UBERON:0004638,2.01e-10,18;UBERON:0001986,2.01e-10,18;UBERON:0004852,2.01e-10,18;UBERON:0000487,1.98e-09,22;UBERON:0003914,4.96e-08,117;UBERON:0003915,6.33e-08,9;UBERON:0004700,6.33e-08,9;UBERON:0001917,6.33e-08,9;UBERON:0007625,7.36e-08,11;UBERON:0000490,1.10e-07,148;UBERON:0004237,1.67e-07,10;UBERON:0004695,1.67e-07,10;UBERON:0002111,1.67e-07,10;UBERON:0004178,1.67e-07,10;UBERON:0006914,2.03e-07,25;UBERON:0002204,6.90e-07,167;UBERON:0002193,7.56e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,3.15859936713415,0.522371256399677,0,0,0,0,0.990130823680373,1.32558950291166,20.1697543935533,21.0943084808392,13.8758917173601,18.5414463540393,1.60057375499824,1.02000345622126,0.313454721478088,1.14494394852423,2.46373965131192,1.25542639594803,0,0,0,1.18009283054671,0.767658796194425,1.85779347979291,0,0,0.369754010166788,0,0,2.93600439334847,1.10799081706375,1.00272223735071,1.51907609501096,10.9718582377563,6.47787332037959,9.27272043483072,2.32637182047304,2.64513160582167,1.69808842831471,2.09186133215116,1.6446715520873,1.23882548358041,3.16461631554365,1.2808035326455,2.83778675866302,2.06847408441971,1.93645405075148,5.41705946377367,4.51781614902251,0.818718450173537,0.674170453335254,2.75475503133812,2.88836124368484,3.83602275479425,4.61791820261403,2.59302754908121,4.68847225585964,2.03146467040009,1.13477044938228,1.24564449799115,4.27122730936464,3.12889751052121,3.25783267057675,3.63239701580021,1.10483290796269,0.949387162322653,1.26753171787165,1.06302149982522,2.09658645508376,1.23561494261145,2.4028302854641,2.73233497385036,0.285012743741249,0,0.182664153764634,0,0,0,0.426730222566507,0,1.14950487990897,0,0,0,0,0.764546456250458,7.93027971474155,6.72610275577843,1.84368859342554,0,0,0,0.167186495390678,0,0,0,0.222820913770347,0,0,0,0,0.260118695119756,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,1.0843174571537,0,0.434539556882471,0.795285947051099,0.973269740605272,10.8715039738678,16.4079754122297,15.2832527106039,0.0654895377488563,0.364295288292542,0,0,0.174129737299267,0.398873881556595,0.238490624305342,0,0,12.9195564788358,12.9035189265919,20.4812895948481,22.0470097350364,20.1359729380755,40.9925882490701,10.4497483268405,24.0327586027476,34.1535612179242,10.3763389957048,0.402829317109147,1.52054421143703,0,20.9567955797145,10.5318453224629,41.3457741955289,26.7189953425142,18.0178368773316,33.7296602424943,23.7316414892032,25.8314458941874,0,0,0,0,3.41902381494365,6.22323149822128,0.860509862246441,2.83734705758686,1.12135520028461,6.4049397437823,7.64669400093196,2.48968828319813,9.0256150286691,5.5577047058576,1.05950199351452,2.88087962239999,1.17160715916898,14.3593635341947,5.70471821544449,10.1625102775225,3.05329696473789,3.88495066483516,5.47758146138769,38.5851383671748,11.669260144618,10.9525328046311,2.37600571456411,1.97813543422845,0,0,12.1202002046928,12.5118519871964,24.6587062780923,0.438977620880838,3.37136575378922,0.901428353439581,6.69249880644124,0.89694817844431,0.640672166455702,0.211931901159562,0.300091096084402,0.515262646192195,1.03056216018252,1.11670113798954,0.506328996723799,0.194874010322397,0.757301322732344,0.0920498986422993,0.80823028409406,1.06502877754984,2.01504196455281,0.67824236924195,0.386521706326594,1.63647672354501,0.573609190778008,0,0,0,0,0,0,1.56449532329816,0,0,0,0.721879481669586,0.473227200159376,1.18009283054671,0,0.441175890929576,0.217879444092406,0.237270619111097,0.134831308160164,0.588664395376038,0,2.21446636387394,0,0,0,0,0,0,0,0,54.2154280543341,0.109750285408626,0,0.100528972411631,0.277765335475589,0.977424915930974,2.07986957055916,90.9287454759222,4.521285794028,19.3724345489106,1.01056513432752,0.462985512576611,2.09279567458058,0,0,10.8335482678455,2.80805118167085,4.90482835552803,1.87467667973554,5.54341023056236,0.283550194484773,0.716468181622786,0.871901815541886,0.383382679165211,0.492663237895943,0.264145302039678,0,0,0,0.63497894292169,0,0,0,1.13110241973656,0.600686115687835,2.00078502841405,2.5790149399433,0.43596006883328,15.1076868791157,2.71470603091333,0,0,1.86156681609409,2.08014873822732,0.771622122786426,0,2.39779961114489,1.28680194292333,0,0,1.62868092146868,0.710783897485092,0.791951872933429,8.44030255766841,8.71533458600294,3.09916272664377,4.86495122564762,1.00451418286425,2.10833939483032,3.83399768786532,0,5.70547620162874,1.01346914667305,1.84928690295345,0,0,0.197030760201927,0,0,19.8193806893521,0,0.773288812777695,1.67516265334349,0.637938751653163,3.74503511973591,0,5.8018171881045,0.12269149171914,2.50085260529839,0.542530047399471,0.207970861530807,4.46072471992904,2.83864347061082,1.52283839490527,0.300946099727719,0,1.03473071292505,1.32845119707087,0.737476674166813,3.64911180765948,0.391602314925481,0.343143423810856,1.86091223510599,2.37285620900479,1.38745825144478,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,4.78050050788232,3.37367278094941,7.2271897292152,52.4446973475457,6.74020195067764,0,1.60405176242628,0,1.7222167224691,4.73437036817464,1.31124414959424,0,0.385076685522074,0,0,2.11103257785751,1.13733384070897,14.1177775379508,2.80690690932781,0,0.270946437543853,0,0,0,0.447749509444357,0.438519753291869,0,10.514455129772,3.93617574839647,3.25378394664303,0.103041011647722,0.183138929636687,0,0,0.650060246036521,1.6068392984416,0.096670718292122,0,0.15350367472613,0.137836572484531,0,0,0.511359764496605,0,1.15699440752685,1.15314040419064,0.765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| |||
|short_description=p3@IGF2BP3 | |||
}} |
Latest revision as of 20:41, 17 September 2015
Short description: | p3@IGF2BP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IGF2BP3_5end |
Coexpression cluster: | C4676_giant_Lens_embryonic_Preadipocyte_Iris_Fibroblast_blood |
Association with transcript: | 0bp_to_ENST00000467592, ENST00000480547, ENST00000497563_5end |
EntrezGene: | IGF2BP3 |
HGNC: | 28868 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.82e-16 | 121 |
lining cell | 1.78e-14 | 58 |
barrier cell | 1.78e-14 | 58 |
endothelial cell | 5.76e-13 | 36 |
endothelial cell of vascular tree | 1.25e-11 | 24 |
blood vessel endothelial cell | 2.01e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.01e-10 | 18 |
vascular associated smooth muscle cell | 8.95e-10 | 32 |
meso-epithelial cell | 9.41e-10 | 45 |
embryonic cell | 2.14e-08 | 250 |
endothelial cell of artery | 6.33e-08 | 9 |
defensive cell | 1.28e-07 | 48 |
phagocyte | 1.28e-07 | 48 |
smooth muscle cell | 1.66e-07 | 43 |
smooth muscle myoblast | 1.66e-07 | 43 |
aortic smooth muscle cell | 1.67e-07 | 10 |
squamous epithelial cell | 4.63e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.85e-08 | 14 |