FFCP PHASE1:Hg19::chr2:163099985..163099996,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:163099985..163099996,- to FFCP PHASE1:Hg19::chr2:163099985..163099996,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2191 | |EntrezGene=2191 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3590 | |HGNC=3590 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_ENST00000463399_5end | |||
|cluster_id=chr2:163099985..163099996,- | |||
|coexpression_cluster_id=C4137 | |||
|description=CAGE_peak_3_at_FAP_5end | |||
|id=chr2:163099985..163099996,- | |||
|ontology_enrichment_celltype=CL:0000055!9.05e-43!180;CL:0000680!2.34e-24!57;CL:0000056!2.34e-24!57;CL:0000355!2.34e-24!57;CL:0000187!3.79e-22!54;CL:0000183!2.44e-19!59;CL:0000057!3.81e-19!75;CL:0000192!9.11e-19!42;CL:0000514!9.11e-19!42;CL:0000393!1.52e-18!60;CL:0000211!1.52e-18!60;CL:0000359!2.51e-16!32;CL:0002371!1.30e-12!591;CL:0000222!3.73e-12!119;CL:0000144!4.96e-12!625;CL:0000048!4.22e-11!430;CL:0000723!1.59e-10!436;CL:0000034!2.05e-09!444;CL:0002334!1.62e-08!12;CL:0000548!2.60e-08!679;CL:0000004!2.60e-08!679;CL:0000255!2.60e-08!679;CL:0000220!3.89e-08!246;CL:0000012!6.12e-08!682;CL:0002321!7.81e-08!248;CL:0002620!1.25e-07!23;CL:0002494!2.29e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.85e-17;32!CL:0000192;1.09e-13;43!CL:0000187;1.39e-12;55!CL:0002334;4.89e-11;12!CL:0000134;3.39e-10;55!CL:0000723;8.59e-10;61!CL:0000393;1.59e-09;61!CL:0000211;1.59e-09;61!CL:0000048;1.89e-09;58!CL:0002494;1.14e-07;16!CL:0002539;1.81e-07;10!CL:0000057;3.57e-07;73!CL:0000034;3.79e-07;69!CL:0000680;4.77e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,9.95e-26,58;CL:0000056,9.95e-26,58;CL:0000355,9.95e-26,58;CL:0000187,6.78e-23,55;CL:0000192,6.67e-20,43;CL:0000514,6.67e-20,43;CL:0000048,2.94e-19,427;CL:0000393,3.15e-19,61;CL:0000211,3.15e-19,61;CL:0000723,2.14e-18,433;CL:0000359,1.85e-17,32;CL:0000034,2.74e-17,441;CL:0000057,6.72e-17,76;CL:0000222,2.96e-11,121;CL:0002334,3.29e-11,12;CL:0002494,1.11e-07,16;CL:0002539,2.28e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;1.09e-13;43!CL:0000355;8.59e-13;58 | |||
|ontology_enrichment_disease=DOID:2394!1.06e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.48e-14;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.49e-14,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.47e-23!83;UBERON:0002329!3.47e-23!83;UBERON:0003077!3.47e-23!83;UBERON:0003059!3.47e-23!83;UBERON:0007282!3.47e-23!83;UBERON:0009618!3.47e-23!83;UBERON:0007285!3.47e-23!83;UBERON:0004290!1.65e-21!70;UBERON:0001134!2.78e-21!61;UBERON:0002036!2.78e-21!61;UBERON:0003082!2.78e-21!61;UBERON:0002385!6.54e-20!63;UBERON:0001015!6.54e-20!63;UBERON:0000383!6.54e-20!63;UBERON:0000486!1.91e-19!82;UBERON:0005256!2.65e-13!143;UBERON:0001637!1.27e-11!42;UBERON:0003509!1.27e-11!42;UBERON:0004572!1.27e-11!42;UBERON:0004872!9.21e-11!84;UBERON:0004573!3.93e-10!33;UBERON:0004571!3.93e-10!33;UBERON:0000490!1.04e-09!138;UBERON:0002049!1.69e-09!79;UBERON:0007798!1.69e-09!79;UBERON:0004535!8.01e-09!110;UBERON:0002100!1.54e-08!216;UBERON:0001009!2.01e-08!113;UBERON:0000475!4.50e-08!365;UBERON:0003102!8.13e-08!95;UBERON:0001981!9.44e-08!60;UBERON:0007500!9.44e-08!60;UBERON:0004537!9.44e-08!60;UBERON:0006965!9.44e-08!60;UBERON:0002097!5.62e-07!40;UBERON:0001135!6.84e-07!15;UBERON:0000055!8.70e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;8.63e-11;31!UBERON:0001015;8.63e-11;31!UBERON:0000383;8.63e-11;31!UBERON:0004573;4.05e-10;33!UBERON:0004571;4.05e-10;33!UBERON:0001637;3.36e-09;42!UBERON:0003509;3.36e-09;42!UBERON:0004572;3.36e-09;42!UBERON:0001135;1.46e-08;15!UBERON:0004237;1.81e-07;10!UBERON:0004695;1.81e-07;10!UBERON:0002111;1.81e-07;10!UBERON:0004178;1.81e-07;10!UBERON:0002118;4.06e-07;5!UBERON:0000947;4.82e-07;21!UBERON:0010191;4.82e-07;21!UBERON:0000992;5.35e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.80e-23,62;UBERON:0002036,4.80e-23,62;UBERON:0003082,4.80e-23,62;UBERON:0002385,7.75e-22,64;UBERON:0001015,7.75e-22,64;UBERON:0000383,7.75e-22,64;UBERON:0002329,2.43e-21,71;UBERON:0003059,2.43e-21,71;UBERON:0007282,2.43e-21,71;UBERON:0004290,2.43e-21,71;UBERON:0009618,2.43e-21,71;UBERON:0003077,8.08e-21,72;UBERON:0007285,8.08e-21,72;UBERON:0007524,2.59e-20,73;UBERON:0000486,9.49e-20,83;UBERON:0007503,5.38e-18,78;UBERON:0005256,3.73e-14,122;UBERON:0001637,4.14e-12,42;UBERON:0003509,4.14e-12,42;UBERON:0004572,4.14e-12,42;UBERON:0004573,4.17e-11,33;UBERON:0004571,4.17e-11,33;UBERON:0000490,1.09e-10,148;UBERON:0004872,2.34e-10,83;UBERON:0003104,1.59e-09,160;UBERON:0009142,1.59e-09,160;UBERON:0001135,1.82e-08,15;UBERON:0000926,3.25e-08,315;UBERON:0004120,3.25e-08,315;UBERON:0006603,3.25e-08,315;UBERON:0007500,6.34e-08,59;UBERON:0001981,6.34e-08,59;UBERON:0004537,6.34e-08,59;UBERON:0006965,6.34e-08,59;UBERON:0002100,7.20e-08,199;UBERON:0002049,1.36e-07,78;UBERON:0007798,1.36e-07,78;UBERON:0003102,1.97e-07,99;UBERON:0004535,2.10e-07,109;UBERON:0004237,2.28e-07,10;UBERON:0004695,2.28e-07,10;UBERON:0002111,2.28e-07,10;UBERON:0004178,2.28e-07,10;UBERON:0002118,4.05e-07,5;UBERON:0000055,5.05e-07,68;UBERON:0000947,5.38e-07,21;UBERON:0010191,5.38e-07,21;UBERON:0000992,5.39e-07,13;UBERON:0001009,6.63e-07,112 | |||
|phase1_expression=5.4503513781167,1.2846031433459,3.80576891059122,1.0007329835313,0.893922188854576,0,0,0,0,0.245733936501509,0,0.873765488520689,0.791300934685361,3.09415882400117,0.662794751455832,6.72325146451775,3.01347264011988,3.65155045193687,4.39139518911456,0,0,0,0.572471974262113,0,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,1.66221330396589,1.80719576192283,3.50936537445123,0.869079113764942,24.6538643585841,3.89307896242109,0.283604451492204,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.417989933073621,2.58416759169329,2.49036383880697,0.66944122552934,0,0,0,0,1.62028389576352,0.267899184852239,0,0,0,0,0.183201743930407,0,0,0,15.4061305025549,6.45815609489357,21.5826964725547,6.88407889797153,2.4826786753885,1.68203280042692,4.2699598291882,2.22000793575444,2.48968828319813,0.942974704487816,0.817309515567294,0.151357427644931,0.576175924479999,0,0.312160076830321,1.71141546463335,0.149448680551801,0.469737994575059,0,0.140450806702248,2.04154171254893,0.61417158655884,1.54988671763648,4.75201142912821,0.989067717114227,0,0,1.68336113954066,0.125118519871964,3.3247693858102,1.31693286264251,2.14541457059314,2.10333282469236,5.55817697484103,3.40840307808838,3.41691822109708,2.11931901159562,2.10063767259082,2.88547081867629,4.3798891807757,2.04728541964749,5.73839529620305,1.26668106709558,3.5340728394176,2.48534726334208,0.80823028409406,3.55009592516614,1.91428986632517,1.86516651541536,1.15956511897978,4.90943017063502,0,0,0,0,0,0,0,1.56449532329816,3.85944562915731,0,1.39310378409594,1.44375896333917,0.236613600079688,0.337169380156203,0,0.220587945464788,0.217879444092406,0,0,0.588664395376038,0,0,0,0.8231480226628,0,0,0,0,0,0,4.11762744716461,0.548751427043128,0,0,0,0,2.07986957055916,1.44331342025273,0.231860809950154,17.14166935843,0,0,0,0,0,0,0,0,0,0.671928512795438,2.26840155587818,3.67189943081678,0.871901815541886,0.766765358330422,0,0,0,0,0,2.53991577168676,1.90994212779139,1.17217447210047,0,1.02827492703324,0.600686115687835,0,0.672786506072164,0.43596006883328,4.400297149257,42.0133076212778,0,1.690605505112,15.6903488785074,12.4808924293639,0.257207374262142,0,0,1.28680194292333,0.542621605391443,0.823240336780769,8.79487697593085,2.84313558994037,0.791951872933429,18.6892413776943,21.7883364650074,0.499864955910285,0,0,0,5.5113716763064,1.14861935834114,2.85273810081437,10.4242540800657,5.75333703141074,15.7573647651108,0,0,0,0,0.254094624222463,1.30139853857622,0,0.167516265334349,0,0,0,0,2.69921281782108,0.500170521059677,0.813795071099207,4.15941723061614,3.39015078714607,2.68094105557689,3.16281820480326,0.300946099727719,2.27407504055985,1.03473071292505,2.65690239414175,0.553107505625109,3.82287903659565,0,0,0,0,0,0,0,0,8.43566546583841,14.1185015425017,3.36792113319688,14.0953064181271,3.58195074346692,8.5252578206112,2.96836132889982,1.69630663182921,2.48586415438378,3.69572202062141,3.11552657510173,1.85936605535935,0,10.2258299854675,0.368323955743585,6.19998020088876,1.82091168006717,3.40923478894503,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0.541892875087706,0,0,0,0,0,0,0.256450125116389,0,0.650756789328606,0.309123034943167,0,0,5.16838984196555,0,9.64103579064957,1.06337790121334,2.00263202249038,0.614014698904518,1.7918754422989,5.47843248828196,1.45016693914229,1.78975917573812,0.979352392114111,0.661139661443912,0,0.382838137483752,0,0.464845549297286,17.3146790756852,2.0911118104818,1.23213432070436,3.72614221221915,2.60979897622522,8.3395898596764,1.5743737541619,4.83805880167568,9.49138274156178,3.43134349062885,0.255897791311334,0,0.95460974377781,0.78494864019923,11.3319648277488,7.13796277313742,7.42218134777825,2.02182481573316,1.58510321173008,2.10629228119491,0,1.21856744815642,1.05650146756755,2.59349831675173,2.68670320712054,1.13008116620243,7.16774946609961,1.32687795048244,1.75380354101505,0,1.31178950409327,7.50768394762005,0.6196469961995,1.40847801266121,7.17056761020257,7.27042903497097,6.4200789266625,10.9975929861885,1.47775344708365,0.987884678879706,0.379473173765715,0.349934720244983,0,0,0,0.282431402330337,0,0,0,3.67557440331135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0.23874448473769,0,0,0,0,0.667852230137435,0,0,0.19924798825107,0,0,0,0,10.8863855681633,0,0,0,0.394573622547734,0,3.33410970433911,0,0,0,0,0,0,0,0,0,0,2.62444152044929,0.173624994933292,0,0,0,0,0,0,0,0,0.461701551022782,5.58316073650306,0,0,0,0.31900115973192,1.74035427463538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0.293977192243133,7.48709176591462,0.34945333648406,0.687944129886466,0,0,0,0.193978032976839,0,0.90392296312213,0,1.19228767021794,0,0,0,0,0.39961921916426,0,0.572682980829578,0,0,0,0,0.54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| ||
|short_description=p3@FAP | |||
}} | }} |
Latest revision as of 21:43, 17 September 2015
Short description: | p3@FAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FAP_5end |
Coexpression cluster: | C4137_Smooth_Fibroblast_Chondrocyte_Mesenchymal_Preadipocyte_mesenchymal_Ewing |
Association with transcript: | -5bp_to_ENST00000463399_5end |
EntrezGene: | FAP |
HGNC: | 3590 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 9.95e-26 | 58 |
myoblast | 9.95e-26 | 58 |
multi-potent skeletal muscle stem cell | 9.95e-26 | 58 |
muscle cell | 6.78e-23 | 55 |
smooth muscle cell | 6.67e-20 | 43 |
smooth muscle myoblast | 6.67e-20 | 43 |
multi fate stem cell | 2.94e-19 | 427 |
electrically responsive cell | 3.15e-19 | 61 |
electrically active cell | 3.15e-19 | 61 |
somatic stem cell | 2.14e-18 | 433 |
vascular associated smooth muscle cell | 1.85e-17 | 32 |
stem cell | 2.74e-17 | 441 |
fibroblast | 6.72e-17 | 76 |
mesodermal cell | 2.96e-11 | 121 |
preadipocyte | 3.29e-11 | 12 |
cardiocyte | 1.11e-07 | 16 |
aortic smooth muscle cell | 2.28e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.49e-14 | 14 |