FFCP PHASE1:Hg19::chr15:49170219..49170261,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=399694 | |EntrezGene=399694 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16743 | |HGNC=16743 | ||
|TSSclassifier=strong | |||
|UniProt=F5H5M1 | |UniProt=F5H5M1 | ||
|association_with_transcript=0bp_to_ENST00000537958,ENST00000558220,uc010uez.1_5end | |association_with_transcript=0bp_to_ENST00000537958,ENST00000558220,uc010uez.1_5end | ||
|cluster_id=chr15:49170219..49170261,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_1_at_SHC4_5end | |description=CAGE_peak_1_at_SHC4_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.71e-16;82!UBERON:0006241;7.07e-08;3!UBERON:0003057;7.07e-08;3!UBERON:0006215;4.40e-07;3 | |ontology_enrichment_development_v019=UBERON:0006601;4.71e-16;82!UBERON:0006241;7.07e-08;3!UBERON:0003057;7.07e-08;3!UBERON:0006215;4.40e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.45e-34!57;UBERON:0005068!5.45e-34!57;UBERON:0006241!5.45e-34!57;UBERON:0007135!5.45e-34!57;UBERON:0001017!3.47e-31!82;UBERON:0005743!3.95e-31!86;UBERON:0002616!1.28e-30!59;UBERON:0000955!4.61e-30!69;UBERON:0006238!4.61e-30!69;UBERON:0000073!1.81e-29!94;UBERON:0001016!1.81e-29!94;UBERON:0003075!1.15e-28!86;UBERON:0007284!1.15e-28!86;UBERON:0002346!4.12e-28!90;UBERON:0003080!1.45e-24!42;UBERON:0002780!3.34e-24!41;UBERON:0001890!3.34e-24!41;UBERON:0006240!3.34e-24!41;UBERON:0003056!2.27e-22!61;UBERON:0000033!2.03e-21!123;UBERON:0000153!2.36e-21!129;UBERON:0007811!2.36e-21!129;UBERON:0002020!5.16e-20!34;UBERON:0003528!5.16e-20!34;UBERON:0001893!5.91e-20!34;UBERON:0002791!2.62e-19!33;UBERON:0007023!1.48e-18!115;UBERON:0001869!1.70e-18!32;UBERON:0000924!3.34e-18!173;UBERON:0006601!3.34e-18!173;UBERON:0004121!3.46e-18!169;UBERON:0002619!4.35e-14!22;UBERON:0000956!9.38e-14!25;UBERON:0000203!9.38e-14!25;UBERON:0001950!9.48e-13!20;UBERON:0003076!1.86e-10!15;UBERON:0003057!1.86e-10!15;UBERON:0004732!4.07e-09!13;UBERON:0000475!1.02e-08!365;UBERON:0004733!2.09e-08!12;UBERON:0002028!2.09e-08!12;UBERON:0007277!2.09e-08!12;UBERON:0000477!2.95e-08!286;UBERON:0000064!4.65e-08!219;UBERON:0000025!6.91e-08!194;UBERON:0002308!6.97e-08!9;UBERON:0000125!6.97e-08!9;UBERON:0004111!8.47e-08!241;UBERON:0002420!9.79e-08!9;UBERON:0007245!9.79e-08!9;UBERON:0010009!9.79e-08!9;UBERON:0010011!9.79e-08!9;UBERON:0000454!9.79e-08!9;UBERON:0000119!1.37e-07!312;UBERON:0000483!1.90e-07!309;UBERON:0002298!8.56e-07!8 | |ontology_enrichment_uberon=UBERON:0001049!5.45e-34!57;UBERON:0005068!5.45e-34!57;UBERON:0006241!5.45e-34!57;UBERON:0007135!5.45e-34!57;UBERON:0001017!3.47e-31!82;UBERON:0005743!3.95e-31!86;UBERON:0002616!1.28e-30!59;UBERON:0000955!4.61e-30!69;UBERON:0006238!4.61e-30!69;UBERON:0000073!1.81e-29!94;UBERON:0001016!1.81e-29!94;UBERON:0003075!1.15e-28!86;UBERON:0007284!1.15e-28!86;UBERON:0002346!4.12e-28!90;UBERON:0003080!1.45e-24!42;UBERON:0002780!3.34e-24!41;UBERON:0001890!3.34e-24!41;UBERON:0006240!3.34e-24!41;UBERON:0003056!2.27e-22!61;UBERON:0000033!2.03e-21!123;UBERON:0000153!2.36e-21!129;UBERON:0007811!2.36e-21!129;UBERON:0002020!5.16e-20!34;UBERON:0003528!5.16e-20!34;UBERON:0001893!5.91e-20!34;UBERON:0002791!2.62e-19!33;UBERON:0007023!1.48e-18!115;UBERON:0001869!1.70e-18!32;UBERON:0000924!3.34e-18!173;UBERON:0006601!3.34e-18!173;UBERON:0004121!3.46e-18!169;UBERON:0002619!4.35e-14!22;UBERON:0000956!9.38e-14!25;UBERON:0000203!9.38e-14!25;UBERON:0001950!9.48e-13!20;UBERON:0003076!1.86e-10!15;UBERON:0003057!1.86e-10!15;UBERON:0004732!4.07e-09!13;UBERON:0000475!1.02e-08!365;UBERON:0004733!2.09e-08!12;UBERON:0002028!2.09e-08!12;UBERON:0007277!2.09e-08!12;UBERON:0000477!2.95e-08!286;UBERON:0000064!4.65e-08!219;UBERON:0000025!6.91e-08!194;UBERON:0002308!6.97e-08!9;UBERON:0000125!6.97e-08!9;UBERON:0004111!8.47e-08!241;UBERON:0002420!9.79e-08!9;UBERON:0007245!9.79e-08!9;UBERON:0010009!9.79e-08!9;UBERON:0010011!9.79e-08!9;UBERON:0000454!9.79e-08!9;UBERON:0000119!1.37e-07!312;UBERON:0000483!1.90e-07!309;UBERON:0002298!8.56e-07!8 | ||
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| ||
|short_description=p1@SHC4 | |short_description=p1@SHC4 | ||
}} | }} |
Latest revision as of 22:14, 17 September 2015
Short description: | p1@SHC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SHC4_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000537958, ENST00000558220, uc010uez.1_5end |
EntrezGene: | SHC4 |
HGNC: | 16743 |
UniProt: | F5H5M1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data