FFCP PHASE1:Hg19::chr2:166096015..166096026,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6326 | |EntrezGene=6326 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10588 | |HGNC=10588 | ||
|TSSclassifier=strong | |||
|UniProt=Q99250,A8K0U1 | |UniProt=Q99250,A8K0U1 | ||
|association_with_transcript=103bp_to_ENST00000357398,ENST00000375437,ENST00000424833,NM_001040142,uc002udc.2_5end | |association_with_transcript=103bp_to_ENST00000357398,ENST00000375437,ENST00000424833,NM_001040142,uc002udc.2_5end | ||
|cluster_id=chr2:166096015..166096026,+ | |||
|coexpression_cluster_id=C2172 | |||
|description=CAGE_peak_4_at_SCN2A_5end | |description=CAGE_peak_4_at_SCN2A_5end | ||
|id=chr2:166096015..166096026,+ | |id=chr2:166096015..166096026,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.44e-17;3!UBERON:0006601;1.03e-15;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p4@SCN2A | |short_description=p4@SCN2A | ||
}} | }} |
Latest revision as of 23:34, 17 September 2015
Short description: | p4@SCN2A |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SCN2A_5end |
Coexpression cluster: | C2172_amygdala_hippocampus_medial_cerebellum_parietal_insula_occipital |
Association with transcript: | 103bp_to_ENST00000357398, ENST00000375437, ENST00000424833, NM_001040142, uc002udc.2_5end |
EntrezGene: | SCN2A |
HGNC: | 10588 |
UniProt: | Q99250A8K0U1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data