FFCP PHASE1:Hg19::chr21:34100296..34100338,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8867 | |EntrezGene=8867 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11503 | |HGNC=11503 | ||
|TSSclassifier=strong | |||
|UniProt=O43426,C9JW66,B9EGN3 | |UniProt=O43426,C9JW66,B9EGN3 | ||
|association_with_transcript=-46bp_to_ENST00000357345,ENST00000382491,ENST00000429236,NM_001160302,NM_001160306,uc002yqf.2,uc002yqg.2_5end | |association_with_transcript=-46bp_to_ENST00000357345,ENST00000382491,ENST00000429236,NM_001160302,NM_001160306,uc002yqf.2,uc002yqg.2_5end | ||
|cluster_id=chr21:34100296..34100338,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_SYNJ1_5end | |description=CAGE_peak_2_at_SYNJ1_5end | ||
|id=chr21:34100296..34100338,- | |id=chr21:34100296..34100338,- | ||
|ontology_enrichment_celltype=CL:0000738!9.87e-17!140;CL:0000037!2.05e-13!172;CL:0000566!2.05e-13!172;CL:0002031!8.48e-13!124;CL:0002087!5.52e-12!119;CL:0002032!7.82e-12!165;CL:0000837!7.82e-12!165;CL:0000988!1.85e-11!182;CL:0000766!6.67e-09!76;CL:0000557!5.19e-07!71;CL:0000839!5.24e-07!70 | |ontology_enrichment_celltype=CL:0000738!9.87e-17!140;CL:0000037!2.05e-13!172;CL:0000566!2.05e-13!172;CL:0002031!8.48e-13!124;CL:0002087!5.52e-12!119;CL:0002032!7.82e-12!165;CL:0000837!7.82e-12!165;CL:0000988!1.85e-11!182;CL:0000766!6.67e-09!76;CL:0000557!5.19e-07!71;CL:0000839!5.24e-07!70 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.21e-17,136;CL:0000037,1.23e-13,168;CL:0002031,1.45e-13,120;CL:0002087,1.26e-12,115;CL:0000988,3.59e-12,177;CL:0002032,4.40e-12,161;CL:0000837,4.40e-12,161;CL:0000766,2.78e-11,72;CL:0000839,6.63e-09,66;CL:0000557,6.68e-09,67;CL:0002009,7.62e-08,61;CL:0000763,1.50e-07,108;CL:0000049,1.50e-07,108;CL:0002194,1.75e-07,59;CL:0000576,1.75e-07,59;CL:0000040,1.75e-07,59;CL:0000559,1.75e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.31e-09;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.81e-31!115;UBERON:0001049!6.42e-26!57;UBERON:0005068!6.42e-26!57;UBERON:0006241!6.42e-26!57;UBERON:0007135!6.42e-26!57;UBERON:0001017!4.43e-25!82;UBERON:0005743!5.42e-24!86;UBERON:0000073!1.53e-23!94;UBERON:0001016!1.53e-23!94;UBERON:0002780!2.07e-23!41;UBERON:0001890!2.07e-23!41;UBERON:0006240!2.07e-23!41;UBERON:0000955!3.02e-23!69;UBERON:0006238!3.02e-23!69;UBERON:0002616!4.79e-23!59;UBERON:0003080!6.05e-22!42;UBERON:0001893!2.67e-19!34;UBERON:0002020!2.91e-19!34;UBERON:0003528!2.91e-19!34;UBERON:0002791!1.29e-18!33;UBERON:0001869!2.39e-18!32;UBERON:0002346!7.78e-18!90;UBERON:0003075!1.26e-16!86;UBERON:0007284!1.26e-16!86;UBERON:0002619!1.03e-14!22;UBERON:0000956!4.84e-14!25;UBERON:0000203!4.84e-14!25;UBERON:0003056!1.53e-13!61;UBERON:0001950!2.07e-13!20;UBERON:0000153!1.20e-09!129;UBERON:0007811!1.20e-09!129;UBERON:0002390!1.73e-09!102;UBERON:0003061!1.73e-09!102;UBERON:0000033!8.22e-09!123;UBERON:0002193!2.70e-08!112;UBERON:0000924!2.77e-08!173;UBERON:0006601!2.77e-08!173;UBERON:0004121!1.66e-07!169;UBERON:0002420!8.00e-07!9;UBERON:0007245!8.00e-07!9;UBERON:0010009!8.00e-07!9;UBERON:0010011!8.00e-07!9;UBERON:0000454!8.00e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!1.81e-31!115;UBERON:0001049!6.42e-26!57;UBERON:0005068!6.42e-26!57;UBERON:0006241!6.42e-26!57;UBERON:0007135!6.42e-26!57;UBERON:0001017!4.43e-25!82;UBERON:0005743!5.42e-24!86;UBERON:0000073!1.53e-23!94;UBERON:0001016!1.53e-23!94;UBERON:0002780!2.07e-23!41;UBERON:0001890!2.07e-23!41;UBERON:0006240!2.07e-23!41;UBERON:0000955!3.02e-23!69;UBERON:0006238!3.02e-23!69;UBERON:0002616!4.79e-23!59;UBERON:0003080!6.05e-22!42;UBERON:0001893!2.67e-19!34;UBERON:0002020!2.91e-19!34;UBERON:0003528!2.91e-19!34;UBERON:0002791!1.29e-18!33;UBERON:0001869!2.39e-18!32;UBERON:0002346!7.78e-18!90;UBERON:0003075!1.26e-16!86;UBERON:0007284!1.26e-16!86;UBERON:0002619!1.03e-14!22;UBERON:0000956!4.84e-14!25;UBERON:0000203!4.84e-14!25;UBERON:0003056!1.53e-13!61;UBERON:0001950!2.07e-13!20;UBERON:0000153!1.20e-09!129;UBERON:0007811!1.20e-09!129;UBERON:0002390!1.73e-09!102;UBERON:0003061!1.73e-09!102;UBERON:0000033!8.22e-09!123;UBERON:0002193!2.70e-08!112;UBERON:0000924!2.77e-08!173;UBERON:0006601!2.77e-08!173;UBERON:0004121!1.66e-07!169;UBERON:0002420!8.00e-07!9;UBERON:0007245!8.00e-07!9;UBERON:0010009!8.00e-07!9;UBERON:0010011!8.00e-07!9;UBERON:0000454!8.00e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.87e-20;41!UBERON:0001890;1.87e-20;41!UBERON:0001893;3.60e-20;34!UBERON:0001869;3.92e-20;32!UBERON:0003528;4.58e-20;34!UBERON:0002020;4.58e-20;34!UBERON:0002791;7.29e-20;32!UBERON:0000073;2.71e-18;53!UBERON:0002616;2.71e-18;53!UBERON:0002619;1.68e-17;22!UBERON:0000956;4.88e-17;25!UBERON:0000203;4.88e-17;25!UBERON:0001950;6.28e-16;20!UBERON:0000955;6.79e-14;68!UBERON:0001017;2.32e-13;75!UBERON:0001016;8.15e-12;83!UBERON:0007023;2.57e-10;114!UBERON:0002420;6.65e-08;9!UBERON:0007245;6.65e-08;9!UBERON:0010009;6.65e-08;9!UBERON:0010011;6.65e-08;9!UBERON:0000454;6.65e-08;9!UBERON:0000125;8.84e-08;9!UBERON:0002308;8.84e-08;9 | |||
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| ||
|short_description=p2@SYNJ1 | |short_description=p2@SYNJ1 | ||
}} | }} |
Latest revision as of 03:29, 18 September 2015
Short description: | p2@SYNJ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SYNJ1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -46bp_to_ENST00000357345, ENST00000382491, ENST00000429236, NM_001160302, NM_001160306, uc002yqf.2, uc002yqg.2_5end |
EntrezGene: | SYNJ1 |
HGNC: | 11503 |
UniProt: | O43426C9JW66B9EGN3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.21e-17 | 136 |
hematopoietic stem cell | 1.23e-13 | 168 |
hematopoietic lineage restricted progenitor cell | 1.45e-13 | 120 |
nongranular leukocyte | 1.26e-12 | 115 |
hematopoietic cell | 3.59e-12 | 177 |
hematopoietic oligopotent progenitor cell | 4.40e-12 | 161 |
hematopoietic multipotent progenitor cell | 4.40e-12 | 161 |
myeloid leukocyte | 2.78e-11 | 72 |
myeloid lineage restricted progenitor cell | 6.63e-09 | 66 |
granulocyte monocyte progenitor cell | 6.68e-09 | 67 |
macrophage dendritic cell progenitor | 7.62e-08 | 61 |
myeloid cell | 1.50e-07 | 108 |
common myeloid progenitor | 1.50e-07 | 108 |
monopoietic cell | 1.75e-07 | 59 |
monocyte | 1.75e-07 | 59 |
monoblast | 1.75e-07 | 59 |
promonocyte | 1.75e-07 | 59 |