FFCP PHASE1:Hg19::chr4:645727..645759,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5158 | |EntrezGene=5158 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8786 | |HGNC=8786 | ||
|TSSclassifier=strong | |||
|UniProt=C9J7V6 | |UniProt=C9J7V6 | ||
|association_with_transcript=-14bp_to_ENST00000474251,ENST00000487902_5end | |association_with_transcript=-14bp_to_ENST00000474251,ENST00000487902_5end | ||
|cluster_id=chr4:645727..645759,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_PDE6B_5end | |description=CAGE_peak_3_at_PDE6B_5end | ||
|id=chr4:645727..645759,+ | |id=chr4:645727..645759,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.65e-26;82!UBERON:0006241;6.83e-14;3!UBERON:0003057;6.83e-14;3!UBERON:0010122;1.93e-09;2!UBERON:0002532;1.37e-07;206!UBERON:0010316;1.37e-07;206 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.65e-115!57;UBERON:0005068!2.65e-115!57;UBERON:0006241!2.65e-115!57;UBERON:0007135!2.65e-115!57;UBERON:0002616!4.83e-95!59;UBERON:0001017!1.48e-92!82;UBERON:0005743!8.11e-92!86;UBERON:0000955!1.41e-87!69;UBERON:0006238!1.41e-87!69;UBERON:0000073!1.92e-86!94;UBERON:0001016!1.92e-86!94;UBERON:0003075!8.64e-85!86;UBERON:0007284!8.64e-85!86;UBERON:0002780!1.61e-81!41;UBERON:0001890!1.61e-81!41;UBERON:0006240!1.61e-81!41;UBERON:0002346!1.24e-80!90;UBERON:0002020!9.05e-80!34;UBERON:0003528!9.05e-80!34;UBERON:0001893!1.44e-79!34;UBERON:0003080!1.92e-79!42;UBERON:0002791!4.16e-76!33;UBERON:0001869!5.76e-72!32;UBERON:0007023!1.81e-71!115;UBERON:0003056!2.84e-56!61;UBERON:0002619!9.41e-55!22;UBERON:0000033!1.00e-50!123;UBERON:0000153!5.89e-48!129;UBERON:0007811!5.89e-48!129;UBERON:0000956!6.96e-48!25;UBERON:0000203!6.96e-48!25;UBERON:0001950!9.88e-48!20;UBERON:0004121!2.26e-44!169;UBERON:0000924!3.91e-43!173;UBERON:0006601!3.91e-43!173;UBERON:0003076!3.25e-35!15;UBERON:0003057!3.25e-35!15;UBERON:0002308!5.97e-35!9;UBERON:0000125!5.97e-35!9;UBERON:0002420!8.44e-34!9;UBERON:0007245!8.44e-34!9;UBERON:0010009!8.44e-34!9;UBERON:0010011!8.44e-34!9;UBERON:0000454!8.44e-34!9;UBERON:0004732!1.53e-28!13;UBERON:0000025!1.54e-27!194;UBERON:0009663!2.60e-27!7;UBERON:0004733!6.66e-25!12;UBERON:0002028!6.66e-25!12;UBERON:0007277!6.66e-25!12;UBERON:0002298!1.57e-24!8;UBERON:0000200!2.35e-22!6;UBERON:0004111!2.60e-20!241;UBERON:0000349!5.90e-19!5;UBERON:0000064!7.84e-19!219;UBERON:0000477!9.31e-18!286;UBERON:0000483!1.24e-16!309;UBERON:0001871!1.48e-16!7;UBERON:0000119!2.23e-16!312;UBERON:0000369!1.14e-15!4;UBERON:0002435!1.14e-15!4;UBERON:0000204!1.14e-15!4;UBERON:0010082!1.14e-15!4;UBERON:0000475!2.68e-15!365;UBERON:0002680!7.47e-15!9;UBERON:0001895!7.47e-15!9;UBERON:0010092!7.47e-15!9;UBERON:0006331!2.60e-13!3;UBERON:0000988!4.38e-13!3;UBERON:0001896!6.27e-13!3;UBERON:0005290!6.27e-13!3;UBERON:0010096!6.27e-13!3;UBERON:0002240!1.28e-12!3;UBERON:0002021!2.19e-12!5;UBERON:0001872!2.39e-12!5;UBERON:0002771!2.67e-12!3;UBERON:0005383!3.78e-12!3;UBERON:0005382!3.78e-12!3;UBERON:0000062!4.78e-10!511;UBERON:0005162!1.35e-09!2;UBERON:0000122!1.35e-09!2;UBERON:0001875!1.80e-09!2;UBERON:0006514!1.80e-09!2;UBERON:0001897!2.03e-09!2;UBERON:0002148!2.29e-09!2;UBERON:0009662!2.29e-09!2;UBERON:0001954!6.22e-09!2;UBERON:0003022!6.22e-09!2;UBERON:0002421!6.22e-09!2;UBERON:0002600!6.22e-09!2;UBERON:0001873!1.35e-08!2;UBERON:0010122!1.35e-08!2;UBERON:0001870!2.06e-08!2;UBERON:0001876!3.25e-08!2;UBERON:0002360!5.26e-08!2;UBERON:0000094!5.26e-08!2;UBERON:0007645!5.26e-08!2;UBERON:0005174!9.80e-08!5;UBERON:0001137!9.80e-08!5;UBERON:0000481!3.65e-07!347;UBERON:0000923!8.18e-07!604;UBERON:0005291!8.18e-07!604;UBERON:0006598!8.18e-07!604;UBERON:0002532!8.18e-07!604;UBERON:0002050!8.75e-07!605;UBERON:0005423!8.75e-07!605 | |ontology_enrichment_uberon=UBERON:0001049!2.65e-115!57;UBERON:0005068!2.65e-115!57;UBERON:0006241!2.65e-115!57;UBERON:0007135!2.65e-115!57;UBERON:0002616!4.83e-95!59;UBERON:0001017!1.48e-92!82;UBERON:0005743!8.11e-92!86;UBERON:0000955!1.41e-87!69;UBERON:0006238!1.41e-87!69;UBERON:0000073!1.92e-86!94;UBERON:0001016!1.92e-86!94;UBERON:0003075!8.64e-85!86;UBERON:0007284!8.64e-85!86;UBERON:0002780!1.61e-81!41;UBERON:0001890!1.61e-81!41;UBERON:0006240!1.61e-81!41;UBERON:0002346!1.24e-80!90;UBERON:0002020!9.05e-80!34;UBERON:0003528!9.05e-80!34;UBERON:0001893!1.44e-79!34;UBERON:0003080!1.92e-79!42;UBERON:0002791!4.16e-76!33;UBERON:0001869!5.76e-72!32;UBERON:0007023!1.81e-71!115;UBERON:0003056!2.84e-56!61;UBERON:0002619!9.41e-55!22;UBERON:0000033!1.00e-50!123;UBERON:0000153!5.89e-48!129;UBERON:0007811!5.89e-48!129;UBERON:0000956!6.96e-48!25;UBERON:0000203!6.96e-48!25;UBERON:0001950!9.88e-48!20;UBERON:0004121!2.26e-44!169;UBERON:0000924!3.91e-43!173;UBERON:0006601!3.91e-43!173;UBERON:0003076!3.25e-35!15;UBERON:0003057!3.25e-35!15;UBERON:0002308!5.97e-35!9;UBERON:0000125!5.97e-35!9;UBERON:0002420!8.44e-34!9;UBERON:0007245!8.44e-34!9;UBERON:0010009!8.44e-34!9;UBERON:0010011!8.44e-34!9;UBERON:0000454!8.44e-34!9;UBERON:0004732!1.53e-28!13;UBERON:0000025!1.54e-27!194;UBERON:0009663!2.60e-27!7;UBERON:0004733!6.66e-25!12;UBERON:0002028!6.66e-25!12;UBERON:0007277!6.66e-25!12;UBERON:0002298!1.57e-24!8;UBERON:0000200!2.35e-22!6;UBERON:0004111!2.60e-20!241;UBERON:0000349!5.90e-19!5;UBERON:0000064!7.84e-19!219;UBERON:0000477!9.31e-18!286;UBERON:0000483!1.24e-16!309;UBERON:0001871!1.48e-16!7;UBERON:0000119!2.23e-16!312;UBERON:0000369!1.14e-15!4;UBERON:0002435!1.14e-15!4;UBERON:0000204!1.14e-15!4;UBERON:0010082!1.14e-15!4;UBERON:0000475!2.68e-15!365;UBERON:0002680!7.47e-15!9;UBERON:0001895!7.47e-15!9;UBERON:0010092!7.47e-15!9;UBERON:0006331!2.60e-13!3;UBERON:0000988!4.38e-13!3;UBERON:0001896!6.27e-13!3;UBERON:0005290!6.27e-13!3;UBERON:0010096!6.27e-13!3;UBERON:0002240!1.28e-12!3;UBERON:0002021!2.19e-12!5;UBERON:0001872!2.39e-12!5;UBERON:0002771!2.67e-12!3;UBERON:0005383!3.78e-12!3;UBERON:0005382!3.78e-12!3;UBERON:0000062!4.78e-10!511;UBERON:0005162!1.35e-09!2;UBERON:0000122!1.35e-09!2;UBERON:0001875!1.80e-09!2;UBERON:0006514!1.80e-09!2;UBERON:0001897!2.03e-09!2;UBERON:0002148!2.29e-09!2;UBERON:0009662!2.29e-09!2;UBERON:0001954!6.22e-09!2;UBERON:0003022!6.22e-09!2;UBERON:0002421!6.22e-09!2;UBERON:0002600!6.22e-09!2;UBERON:0001873!1.35e-08!2;UBERON:0010122!1.35e-08!2;UBERON:0001870!2.06e-08!2;UBERON:0001876!3.25e-08!2;UBERON:0002360!5.26e-08!2;UBERON:0000094!5.26e-08!2;UBERON:0007645!5.26e-08!2;UBERON:0005174!9.80e-08!5;UBERON:0001137!9.80e-08!5;UBERON:0000481!3.65e-07!347;UBERON:0000923!8.18e-07!604;UBERON:0005291!8.18e-07!604;UBERON:0006598!8.18e-07!604;UBERON:0002532!8.18e-07!604;UBERON:0002050!8.75e-07!605;UBERON:0005423!8.75e-07!605 | ||
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|short_description=p3@PDE6B | |short_description=p3@PDE6B | ||
}} | }} |
Latest revision as of 05:00, 18 September 2015
Short description: | p3@PDE6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PDE6B_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -14bp_to_ENST00000474251, ENST00000487902_5end |
EntrezGene: | PDE6B |
HGNC: | 8786 |
UniProt: | C9J7V6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data