FFCP PHASE1:Hg19::chr1:44482806..44482872,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6536 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11056 | |||
|TSSclassifier=strong | |||
|UniProt=P48067 | |||
|association_with_transcript=124bp_to_ENST00000357730,ENST00000360584,NM_006934,NM_201649,uc001cll.2,uc001clm.2,uc009vxd.2,uc010okn.1_5end | |||
|cluster_id=chr1:44482806..44482872,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_SLC6A9_5end | |||
|id=chr1:44482806..44482872,- | |||
|ontology_enrichment_celltype=CL:0000128!2.52e-08!7;CL:0000126!2.52e-08!7;CL:0000127!2.52e-08!7;CL:0002453!2.52e-08!7;CL:0002605!4.23e-08!3;CL:0000047!6.42e-08!8;CL:0002319!3.65e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002605;4.02e-10;3!CL:0000047;3.74e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.65e-10,8;CL:0002605,4.02e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.36e-21;82!UBERON:0006241;3.26e-11;3!UBERON:0003057;3.26e-11;3!UBERON:0006215;1.21e-09;3!UBERON:0010122;4.18e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.70e-119!57;UBERON:0005068!7.70e-119!57;UBERON:0006241!7.70e-119!57;UBERON:0007135!7.70e-119!57;UBERON:0001017!3.53e-112!82;UBERON:0005743!2.59e-110!86;UBERON:0000073!2.43e-105!94;UBERON:0001016!2.43e-105!94;UBERON:0002616!1.60e-100!59;UBERON:0000955!1.44e-93!69;UBERON:0006238!1.44e-93!69;UBERON:0003075!6.48e-93!86;UBERON:0007284!6.48e-93!86;UBERON:0002780!2.01e-89!41;UBERON:0001890!2.01e-89!41;UBERON:0006240!2.01e-89!41;UBERON:0002346!4.07e-88!90;UBERON:0003080!4.65e-87!42;UBERON:0002020!3.95e-73!34;UBERON:0003528!3.95e-73!34;UBERON:0001893!4.67e-73!34;UBERON:0002791!1.07e-70!33;UBERON:0003056!1.53e-69!61;UBERON:0001869!7.65e-68!32;UBERON:0004121!1.67e-57!169;UBERON:0000033!2.95e-57!123;UBERON:0000924!8.46e-56!173;UBERON:0006601!8.46e-56!173;UBERON:0000153!6.67e-54!129;UBERON:0007811!6.67e-54!129;UBERON:0007023!1.09e-52!115;UBERON:0000956!4.66e-52!25;UBERON:0000203!4.66e-52!25;UBERON:0002619!1.70e-45!22;UBERON:0001950!5.08e-41!20;UBERON:0003076!6.96e-31!15;UBERON:0003057!6.96e-31!15;UBERON:0000025!1.40e-29!194;UBERON:0004732!3.23e-26!13;UBERON:0004733!1.07e-23!12;UBERON:0002028!1.07e-23!12;UBERON:0007277!1.07e-23!12;UBERON:0002308!4.55e-22!9;UBERON:0000125!4.55e-22!9;UBERON:0002420!2.48e-21!9;UBERON:0007245!2.48e-21!9;UBERON:0010009!2.48e-21!9;UBERON:0010011!2.48e-21!9;UBERON:0000454!2.48e-21!9;UBERON:0004111!7.40e-21!241;UBERON:0000483!7.81e-18!309;UBERON:0000477!1.10e-17!286;UBERON:0000119!1.65e-17!312;UBERON:0009663!3.35e-17!7;UBERON:0001894!3.43e-17!7;UBERON:0006222!3.43e-17!7;UBERON:0002680!1.74e-16!9;UBERON:0001895!1.74e-16!9;UBERON:0010092!1.74e-16!9;UBERON:0002298!2.14e-16!8;UBERON:0000064!5.91e-15!219;UBERON:0000200!2.34e-14!6;UBERON:0001871!5.73e-14!7;UBERON:0000475!1.95e-13!365;UBERON:0000349!2.15e-12!5;UBERON:0001872!3.47e-12!5;UBERON:0002021!4.63e-12!5;UBERON:0000369!6.00e-10!4;UBERON:0002435!6.00e-10!4;UBERON:0000204!6.00e-10!4;UBERON:0010082!6.00e-10!4;UBERON:0003296!6.14e-10!4;UBERON:0010133!6.14e-10!4;UBERON:0002037!1.75e-09!6;UBERON:0006215!1.75e-09!6;UBERON:0000062!4.28e-09!511;UBERON:0006331!4.35e-09!3;UBERON:0001896!4.46e-09!3;UBERON:0005290!4.46e-09!3;UBERON:0010096!4.46e-09!3;UBERON:0000988!4.82e-09!3;UBERON:0002240!6.10e-09!3;UBERON:0000922!2.08e-08!612;UBERON:0000481!2.23e-08!347;UBERON:0000923!4.00e-08!604;UBERON:0005291!4.00e-08!604;UBERON:0006598!4.00e-08!604;UBERON:0002532!4.00e-08!604;UBERON:0002050!4.42e-08!605;UBERON:0005423!4.42e-08!605;UBERON:0002771!6.70e-08!3;UBERON:0000467!7.58e-08!625;UBERON:0000480!8.35e-08!626;UBERON:0005383!8.72e-08!3;UBERON:0005382!8.72e-08!3;UBERON:0005162!8.55e-07!2;UBERON:0000122!8.55e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.46e-65;34!UBERON:0003528;9.90e-63;34!UBERON:0002020;9.90e-63;34!UBERON:0002791;2.73e-61;32!UBERON:0001869;4.92e-61;32!UBERON:0002780;7.05e-60;41!UBERON:0001890;7.05e-60;41!UBERON:0000073;1.48e-58;53!UBERON:0002616;1.48e-58;53!UBERON:0000956;3.78e-48;25!UBERON:0000203;3.78e-48;25!UBERON:0001017;3.18e-41;75!UBERON:0000955;3.23e-41;68!UBERON:0002619;5.80e-40;22!UBERON:0001950;1.78e-34;20!UBERON:0001016;6.01e-34;83!UBERON:0000125;1.93e-28;9!UBERON:0002308;1.93e-28;9!UBERON:0002420;1.81e-27;9!UBERON:0007245;1.81e-27;9!UBERON:0010009;1.81e-27;9!UBERON:0010011;1.81e-27;9!UBERON:0000454;1.81e-27;9!UBERON:0004732;2.60e-24;13!UBERON:0009663;4.67e-22;7!UBERON:0004733;3.21e-21;12!UBERON:0002028;3.21e-21;12!UBERON:0002298;5.06e-21;6!UBERON:0007023;4.59e-17;114!UBERON:0000349;1.12e-15;5!UBERON:0002784;3.41e-14;4!UBERON:0000200;3.45e-13;6!UBERON:0011216;1.11e-12;132!UBERON:0002680;1.35e-12;9!UBERON:0001895;1.35e-12;9!UBERON:0000369;1.50e-12;4!UBERON:0002435;1.50e-12;4!UBERON:0000204;1.50e-12;4!UBERON:0001894;2.73e-12;7!UBERON:0001896;2.10e-11;3!UBERON:0005290;2.10e-11;3!UBERON:0000988;2.36e-11;3!UBERON:0002240;3.26e-11;3!UBERON:0005174;3.26e-11;3!UBERON:0001137;3.26e-11;3!UBERON:0001871;6.60e-11;6!UBERON:0001872;1.83e-10;5!UBERON:0002021;2.47e-10;5!UBERON:0005383;9.14e-10;3!UBERON:0005382;9.14e-10;3!UBERON:0010314;4.30e-09;132!UBERON:0005162;2.03e-08;2!UBERON:0000122;2.03e-08;2!UBERON:0002148;4.22e-08;2!UBERON:0006331;4.22e-08;2!UBERON:0009662;4.22e-08;2!UBERON:0001897;4.29e-08;2!UBERON:0010225;4.29e-08;2!UBERON:0001875;5.83e-08;2!UBERON:0006514;5.83e-08;2!UBERON:0001905;8.74e-08;2!UBERON:0002757;8.74e-08;2!UBERON:0010134;8.74e-08;2!UBERON:0005408;8.74e-08;2!UBERON:0001899;8.74e-08;2!UBERON:0001954;1.84e-07;2!UBERON:0003022;1.84e-07;2!UBERON:0002421;1.84e-07;2!UBERON:0002600;1.84e-07;2!UBERON:0001876;4.18e-07;2!UBERON:0001873;4.18e-07;2!UBERON:0002771;4.97e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.01e-116,56;UBERON:0005068,1.01e-116,56;UBERON:0006241,1.01e-116,56;UBERON:0007135,1.01e-116,56;UBERON:0001017,4.00e-112,81;UBERON:0000073,5.94e-107,53;UBERON:0002616,5.94e-107,53;UBERON:0001016,3.12e-104,89;UBERON:0000955,4.03e-92,68;UBERON:0006238,4.03e-92,68;UBERON:0003075,2.32e-88,82;UBERON:0007284,2.32e-88,82;UBERON:0002780,8.96e-86,41;UBERON:0001890,8.96e-86,41;UBERON:0003080,8.96e-86,41;UBERON:0006240,8.96e-86,41;UBERON:0002346,9.32e-84,86;UBERON:0003528,9.68e-75,34;UBERON:0002020,9.68e-75,34;UBERON:0001893,1.18e-74,34;UBERON:0002791,2.31e-68,32;UBERON:0001869,4.31e-68,32;UBERON:0010371,2.23e-67,104;UBERON:0003056,1.28e-66,61;UBERON:0007023,1.97e-55,114;UBERON:0004121,9.67e-54,171;UBERON:0000924,9.67e-54,171;UBERON:0006601,9.67e-54,171;UBERON:0010314,5.10e-53,132;UBERON:0000956,3.64e-48,25;UBERON:0000203,3.64e-48,25;UBERON:0002619,5.60e-40,22;UBERON:0011216,2.09e-36,223;UBERON:0001950,1.76e-34,20;UBERON:0003076,3.77e-30,15;UBERON:0003057,3.77e-30,15;UBERON:0000125,2.03e-28,9;UBERON:0002308,2.03e-28,9;UBERON:0002420,1.87e-27,9;UBERON:0007245,1.87e-27,9;UBERON:0010009,1.87e-27,9;UBERON:0010011,1.87e-27,9;UBERON:0000454,1.87e-27,9;UBERON:0000025,1.90e-26,192;UBERON:0004732,2.64e-24,13;UBERON:0009663,4.90e-22,7;UBERON:0004733,3.25e-21,12;UBERON:0002028,3.25e-21,12;UBERON:0007277,3.25e-21,12;UBERON:0002298,5.15e-21,6;UBERON:0004111,6.20e-19,240;UBERON:0000349,9.73e-16,5;UBERON:0000483,2.74e-15,306;UBERON:0000119,4.99e-15,309;UBERON:0002784,3.53e-14,4;UBERON:0000200,3.69e-13,6;UBERON:0002680,1.35e-12,9;UBERON:0001895,1.35e-12,9;UBERON:0010092,1.35e-12,9;UBERON:0000369,1.55e-12,4;UBERON:0002435,1.55e-12,4;UBERON:0000204,1.55e-12,4;UBERON:0010082,1.55e-12,4;UBERON:0001894,2.83e-12,7;UBERON:0006222,2.83e-12,7;UBERON:0001896,2.13e-11,3;UBERON:0005290,2.13e-11,3;UBERON:0010096,2.13e-11,3;UBERON:0000988,2.36e-11,3;UBERON:0002240,3.21e-11,3;UBERON:0005174,3.21e-11,3;UBERON:0001137,3.21e-11,3;UBERON:0001871,6.82e-11,6;UBERON:0001872,1.80e-10,5;UBERON:0002021,2.32e-10,5;UBERON:0005383,1.04e-09,3;UBERON:0005382,1.04e-09,3;UBERON:0005162,2.04e-08,2;UBERON:0000122,2.04e-08,2;UBERON:0000923,2.77e-08,560;UBERON:0010316,2.77e-08,560;UBERON:0005291,2.77e-08,560;UBERON:0006598,2.77e-08,560;UBERON:0010317,2.77e-08,560;UBERON:0002532,2.77e-08,560;UBERON:0002050,3.93e-08,564;UBERON:0002148,4.22e-08,2;UBERON:0006331,4.22e-08,2;UBERON:0009662,4.22e-08,2;UBERON:0001897,4.36e-08,2;UBERON:0010225,4.36e-08,2;UBERON:0001875,5.93e-08,2;UBERON:0006514,5.93e-08,2;UBERON:0000922,8.65e-08,592;UBERON:0001905,8.88e-08,2;UBERON:0002757,8.88e-08,2;UBERON:0010134,8.88e-08,2;UBERON:0005408,8.88e-08,2;UBERON:0001899,8.88e-08,2;UBERON:0005423,1.64e-07,581;UBERON:0001954,1.78e-07,2;UBERON:0003022,1.78e-07,2;UBERON:0002421,1.78e-07,2;UBERON:0002600,1.78e-07,2;UBERON:0001876,4.11e-07,2;UBERON:0001873,4.52e-07,2;UBERON:0010122,4.52e-07,2;UBERON:0002771,5.29e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0,0.940364164434263,7.15589967827642,5.33810257784248,7.90918629447258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,2.42311289670768,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,9.27443239800615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.1960861178188,16.9181810014908,6.18631050222156,11.5586223080701,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,8.15882615180974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81599647657131,10.8538674849366,3.99227596002388,0,0,0,0,0,0,2.75794698593172,0,0,4.42870692906919,6.0298219312704,1.52581736317083,4.09143261745531,6.50204761697804,1.75508317723178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.0803409693628,0,18.0383623208511,0,0,0,0,0,0.61214552326098,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,18.7564014847842,0,0,7.78722790257308,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,12.0084057741958,20.6727122126909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.36183751847443,10.3514588644797,0,0,0,0,0,6.25720433577654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.7117650215324,26.446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,2.19647276823534,7.01069211956399,14.3352298922518,30.1727020180238,40.9836259413131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.22162962682788,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,6.80829786022471,5.6678630530234,8.77986224814332,4.71767637753736,0.504143392443436,9.33622908266941,5.16722066021924,48.5416028881125,0,0,0,0,0,0,0,0,0,0,0,0,0,9.65787460043044,3.90539049306924,5.99391709853434,11.2245984043215,0.546974809018219,0,0,0,0,14.4639495687137,10.0885116665647,0.606965604236632,0.227662191351298,0,0,0,25.0128617354741,11.31291705281,0,0,0,4.08500533781605,0,0,0,0,45.3161290080001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.3607075866785,22.8725728251856,12.679671827502,0,0,0.0644578879735772,0,0,0,0,0,0,37.2682916193773,0,8.770902234628,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,16.5833887891756,28.0303418785736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@SLC6A9 | |||
}} |
Latest revision as of 05:43, 18 September 2015
Short description: | p3@SLC6A9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC6A9_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 124bp_to_ENST00000357730, ENST00000360584, NM_006934, NM_201649, uc001cll.2, uc001clm.2, uc009vxd.2, uc010okn.1_5end |
EntrezGene: | SLC6A9 |
HGNC: | 11056 |
UniProt: | P48067 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.65e-10 | 8 |
astrocyte of the cerebral cortex | 4.02e-10 | 3 |