FFCP PHASE1:Hg19::chr10:49813051..49813064,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:49813051..49813064,-
|short_description=p4@ARHGAP22
|description=CAGE_peak_4_at_ARHGAP22_5end
|association_with_transcript=-51bp_to_ENST00000491108_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=58504 | |EntrezGene=58504 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30320 | |HGNC=30320 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-51bp_to_ENST00000491108_5end | |||
|cluster_id=chr10:49813051..49813064,- | |||
|coexpression_cluster_id=C2062 | |||
|description=CAGE_peak_4_at_ARHGAP22_5end | |||
|id=chr10:49813051..49813064,- | |||
|ontology_enrichment_celltype=CL:0000055!1.09e-32!180;CL:0000359!8.31e-25!32;CL:0000680!6.94e-24!57;CL:0000056!6.94e-24!57;CL:0000355!6.94e-24!57;CL:0000192!3.84e-23!42;CL:0000514!3.84e-23!42;CL:0000183!1.73e-22!59;CL:0000187!4.03e-21!54;CL:0000393!1.33e-17!60;CL:0000211!1.33e-17!60;CL:0000057!8.70e-17!75;CL:0000222!3.44e-14!119;CL:0000048!1.45e-13!430;CL:0000723!7.70e-13!436;CL:0002539!1.70e-12!10;CL:0000034!6.49e-12!444;CL:0002620!9.83e-12!23;CL:0002371!1.81e-11!591;CL:0000144!4.27e-09!625;CL:0002551!4.33e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.51e-50;32!CL:0000192;2.87e-30;43!CL:0002539;1.56e-27;10!CL:0000187;2.90e-16;55!CL:0000056;4.19e-12;4!CL:0000393;7.65e-12;61!CL:0000211;7.65e-12;61!CL:0002594;7.95e-12;4!CL:0002595;2.39e-09;5!CL:0002582;2.79e-09;3!CL:0000515;2.91e-09;3!CL:0002592;3.38e-09;3!CL:0002551;2.83e-07;6!CL:0000680;6.97e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.96e-53,32;CL:0000192,6.71e-41,43;CL:0000514,6.71e-41,43;CL:0000680,7.88e-39,58;CL:0000056,7.88e-39,58;CL:0000355,7.88e-39,58;CL:0000187,5.28e-33,55;CL:0000393,5.82e-29,61;CL:0000211,5.82e-29,61;CL:0002539,1.43e-27,10;CL:0000048,1.46e-17,427;CL:0000723,4.26e-17,433;CL:0000034,1.71e-16,441;CL:0000222,3.09e-15,121;CL:0000515,4.83e-12,4;CL:0002594,5.88e-12,4;CL:0002595,2.19e-09,5;CL:0002582,2.91e-09,3;CL:0002592,3.08e-09,3;CL:0000057,1.22e-07,76;CL:0002551,2.65e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;2.87e-30;43!CL:0000355;2.16e-19;58!CL:0000515;4.19e-12;4 | |||
|ontology_enrichment_disease=DOID:2394!5.39e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.13e-13;14!DOID:0060084;6.65e-10;3!DOID:127;6.65e-10;3!DOID:120;6.76e-08;27!DOID:0060072;1.69e-07;4!DOID:193;3.22e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.39e-13,14;DOID:0060084,6.86e-10,3;DOID:127,6.86e-10,3;DOID:120,7.44e-08,27;DOID:0060072,1.73e-07,4;DOID:193,3.52e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0001637!6.04e-29!42;UBERON:0003509!6.04e-29!42;UBERON:0004572!6.04e-29!42;UBERON:0000914!2.67e-27!83;UBERON:0002329!2.67e-27!83;UBERON:0003077!2.67e-27!83;UBERON:0003059!2.67e-27!83;UBERON:0007282!2.67e-27!83;UBERON:0009618!2.67e-27!83;UBERON:0007285!2.67e-27!83;UBERON:0004290!2.47e-24!70;UBERON:0004573!6.35e-23!33;UBERON:0004571!6.35e-23!33;UBERON:0001134!2.69e-21!61;UBERON:0002036!2.69e-21!61;UBERON:0003082!2.69e-21!61;UBERON:0002385!4.51e-21!63;UBERON:0001015!4.51e-21!63;UBERON:0000383!4.51e-21!63;UBERON:0001981!2.33e-20!60;UBERON:0007500!2.33e-20!60;UBERON:0004537!2.33e-20!60;UBERON:0006965!2.33e-20!60;UBERON:0000486!4.34e-20!82;UBERON:0000055!5.17e-19!69;UBERON:0004872!5.34e-17!84;UBERON:0002049!1.58e-16!79;UBERON:0007798!1.58e-16!79;UBERON:0000947!6.44e-15!21;UBERON:0010191!6.44e-15!21;UBERON:0005256!1.57e-13!143;UBERON:0003914!6.37e-13!118;UBERON:0004535!9.60e-13!110;UBERON:0004237!1.70e-12!10;UBERON:0004695!1.70e-12!10;UBERON:0002111!1.70e-12!10;UBERON:0004178!1.70e-12!10;UBERON:0001009!5.60e-12!113;UBERON:0002204!1.76e-10!167;UBERON:0000025!8.19e-10!194;UBERON:0001135!1.59e-09!15;UBERON:0000490!4.40e-09!138;UBERON:0002199!1.48e-08!45;UBERON:0002416!1.48e-08!45;UBERON:0004111!3.91e-08!241;UBERON:0000119!5.48e-08!312;UBERON:0000483!6.34e-08!309;UBERON:0000475!1.46e-07!365;UBERON:0000477!2.27e-07!286;UBERON:0002097!2.55e-07!40;UBERON:0000467!4.42e-07!625;UBERON:0000480!5.31e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.94e-38;33!UBERON:0004571;3.94e-38;33!UBERON:0001637;4.11e-32;42!UBERON:0003509;4.11e-32;42!UBERON:0004572;4.11e-32;42!UBERON:0004237;1.56e-27;10!UBERON:0004695;1.56e-27;10!UBERON:0002111;1.56e-27;10!UBERON:0004178;1.56e-27;10!UBERON:0000947;1.08e-22;21!UBERON:0010191;1.08e-22;21!UBERON:0007500;1.11e-17;56!UBERON:0001981;1.11e-17;56!UBERON:0004537;1.11e-17;56!UBERON:0001135;1.42e-17;15!UBERON:0002385;1.38e-14;31!UBERON:0001015;1.38e-14;31!UBERON:0000383;1.38e-14;31!UBERON:0001310;7.95e-12;4!UBERON:0000055;9.87e-12;65!UBERON:0003914;1.12e-10;74!UBERON:0002049;1.63e-10;75!UBERON:0007798;1.63e-10;75!UBERON:0003834;2.39e-09;5!UBERON:0001533;2.39e-09;5!UBERON:0003498;3.38e-09;3!UBERON:0005985;3.38e-09;3!UBERON:0001621;3.38e-09;3!UBERON:0000992;4.89e-09;13!UBERON:0002118;1.92e-08;5!UBERON:0010260;1.52e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.00e-48,42;UBERON:0003509,2.00e-48,42;UBERON:0004572,2.00e-48,42;UBERON:0004573,1.87e-42,33;UBERON:0004571,1.87e-42,33;UBERON:0002329,2.26e-39,71;UBERON:0003059,2.26e-39,71;UBERON:0007282,2.26e-39,71;UBERON:0004290,2.26e-39,71;UBERON:0009618,2.26e-39,71;UBERON:0003077,1.10e-38,72;UBERON:0007285,1.10e-38,72;UBERON:0007524,5.10e-38,73;UBERON:0001134,9.63e-36,62;UBERON:0002036,9.63e-36,62;UBERON:0003082,9.63e-36,62;UBERON:0007503,6.10e-35,78;UBERON:0007500,2.10e-34,59;UBERON:0001981,2.10e-34,59;UBERON:0004537,2.10e-34,59;UBERON:0006965,2.10e-34,59;UBERON:0002385,2.40e-34,64;UBERON:0001015,2.40e-34,64;UBERON:0000383,2.40e-34,64;UBERON:0000486,3.09e-32,83;UBERON:0000055,1.02e-28,68;UBERON:0004237,1.43e-27,10;UBERON:0004695,1.43e-27,10;UBERON:0002111,1.43e-27,10;UBERON:0004178,1.43e-27,10;UBERON:0004872,1.50e-25,83;UBERON:0002049,5.90e-24,78;UBERON:0007798,5.90e-24,78;UBERON:0000947,1.16e-22,21;UBERON:0010191,1.16e-22,21;UBERON:0005256,7.85e-19,122;UBERON:0001135,1.34e-17,15;UBERON:0004535,2.27e-17,109;UBERON:0001009,1.12e-16,112;UBERON:0000926,2.54e-16,315;UBERON:0004120,2.54e-16,315;UBERON:0006603,2.54e-16,315;UBERON:0003914,1.33e-15,117;UBERON:0000490,6.50e-15,148;UBERON:0002204,5.20e-13,167;UBERON:0003104,3.55e-12,160;UBERON:0009142,3.55e-12,160;UBERON:0001310,5.88e-12,4;UBERON:0003834,2.19e-09,5;UBERON:0001533,2.19e-09,5;UBERON:0001621,3.08e-09,3;UBERON:0003498,3.24e-09,5;UBERON:0005985,3.24e-09,5;UBERON:0000992,5.17e-09,13;UBERON:0002118,1.96e-08,5;UBERON:0003081,4.12e-08,203;UBERON:0002100,4.14e-08,199;UBERON:0010260,1.33e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,2.52687949370732,0,0.737201809504527,0,0,0,0.247532705920093,0,8.74022690387308,9.04041792035965,4.38186054232424,11.7103871709722,0,0.204000691244253,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0.755751887377619,0.485168122375632,0,0,0,0,0,0,0,0,0,0.188242339542605,0.818718450173537,0,0,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,1.5905718941022,0.973269740605272,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.596287222100115,0.860234595106124,0.694281003215189,1.69592382577203,0.419499436209906,0,0.626984899610432,0.516833518338658,0.71153252537342,0,0,0,0,0.367663080345869,0,0.267899184852239,0,0,0,0,0.183201743930407,0,0,0,0,1.2663051166458,1.19168262731897,1.43418310374407,0,0,0,1.48000529050296,0.311211035399766,0.134710672069688,0,0,0,0,4.68240115245481,3.4228309292667,1.94283284717341,0.822041490506354,1.13311061057692,0.98315564691574,2.04154171254893,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0.336672227908132,0.750711119231785,2.77064115484183,1.31693286264251,0.30648779579902,0.300476117813194,0.340296549480063,0.89694817844431,0.213557388818567,0.635795703478686,0.900273288253207,0.618315175430633,0,0,1.5189869901714,0.194874010322397,0.252433774244115,0.184099797284599,0.323292113637624,0,0.906768884048762,0.847802961552438,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0,0,0.16798212819886,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.51336800074665,0.775630294546667,0,0.845302752556,0.26593811658487,1.04007436911366,0.514414748524284,0,2.66422179016099,0,0.542621605391443,0,0.65147236858747,0,0,0,0.871533458600294,0,0,0,0,0.239624855491583,0,15.690059554479,8.10775317338444,1.2328579353023,9.66929201495436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813795071099207,0,0.535286966391485,0,0.234282829985426,2.70851489754947,2.27407504055985,1.03473071292505,0,2.76553752812555,0.434418072340414,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0.482561763430822,0,4.1636617326717,2.30830242907065,5.17401082886998,3.11552657510173,3.95115286763861,0,0.40101294060657,0,0,0,0.131124414959424,0,0.0770153371044148,0.784349769176855,0,0.211103257785751,0,0.170093705276516,0,0,0.270946437543853,0.501689773854853,0,0,0.447749509444357,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0.48335359146061,0,0,0.413509717453592,0,0,0.340906509664404,0,0,0.192190067365106,0.255225424989168,0,6.04299214086472,2.51849877464512,9.0614845120878,1.84820148105653,3.19383618190213,6.95946393660058,5.18907813490976,1.71749864090389,0,0.316379424718726,0,2.04718233049067,0,2.86382923133343,0,0.179872457583315,0,0,5.45892700247953,4.75530963519025,2.52755073743389,0,2.92456187557541,2.11300293513511,0.272999822815972,0,2.26016233240486,0,6.6343897524122,6.57676327880644,0.578775534266688,0,8.92805658635898,4.02770547529675,1.97186921772569,1.43411352204052,0.294747123039363,9.27344733851251,0.709522128141196,0.211107635297664,0,0.75894634753143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0,0,0.933118762985422,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0.0969890164884194,0,0,0.822251547880505,0.19871461170299,0.189932387867636,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,6.51599522104455,7.77799342081141,14.0432564847046,0,0,0.681552087141687,0,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.745156835296601,0,0,0,0,0,0,0,1.04478362020812,0,0,10.4171652901299,1.76097531226803,0.889811221596536,0.457680136793847,0.151230923763239,0.466311601748341,3.54852359975121,2.70804504178294,2.24901556081802,0.621051827505038,3.31764966272684,3.45594228925393,1.04349012362347,0,0,1.62748293281865,2.00033525122815,0.107410557042488,1.39210127963548,2.78667122089031,0.800055529326307,0,0.336749488765919,0,0,0,0,0,0,0,0.179088841081487,0,0,0.706756583783524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.747667062745149,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473328002922261,0.0852134047591577,0,0,0,5.7332336338646,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.392616934229891,0,0.4226557275834,0.169927114687817,0,0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| ||
|short_description=p4@ARHGAP22 | |||
}} | }} |
Latest revision as of 09:11, 18 September 2015
Short description: | p4@ARHGAP22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ARHGAP22_5end |
Coexpression cluster: | C2062_Myoblast_mesenchymal_Smooth_leiomyoma_Preadipocyte_Aortic_Fibroblast |
Association with transcript: | -51bp_to_ENST00000491108_5end |
EntrezGene: | ARHGAP22 |
HGNC: | 30320 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.96e-53 | 32 |
smooth muscle cell | 6.71e-41 | 43 |
smooth muscle myoblast | 6.71e-41 | 43 |
muscle precursor cell | 7.88e-39 | 58 |
myoblast | 7.88e-39 | 58 |
multi-potent skeletal muscle stem cell | 7.88e-39 | 58 |
muscle cell | 5.28e-33 | 55 |
electrically responsive cell | 5.82e-29 | 61 |
electrically active cell | 5.82e-29 | 61 |
aortic smooth muscle cell | 1.43e-27 | 10 |
multi fate stem cell | 1.46e-17 | 427 |
somatic stem cell | 4.26e-17 | 433 |
stem cell | 1.71e-16 | 441 |
mesodermal cell | 3.09e-15 | 121 |
skeletal muscle myoblast | 4.83e-12 | 4 |
smooth muscle cell of the umbilical artery | 5.88e-12 | 4 |
smooth muscle cell of the subclavian artery | 2.19e-09 | 5 |
visceral preadipocyte | 2.91e-09 | 3 |
smooth muscle cell of the coronary artery | 3.08e-09 | 3 |
fibroblast | 1.22e-07 | 76 |
fibroblast of dermis | 2.65e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.39e-13 | 14 |
cell type benign neoplasm | 6.86e-10 | 3 |
leiomyoma | 6.86e-10 | 3 |
female reproductive organ cancer | 7.44e-08 | 27 |
benign neoplasm | 1.73e-07 | 4 |
reproductive organ cancer | 3.52e-07 | 29 |