FFCP PHASE1:Hg19::chr10:49813077..49813087,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58504 | |EntrezGene=58504 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30320 | |HGNC=30320 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=45bp_to_ENST00000471013_5end | |association_with_transcript=45bp_to_ENST00000471013_5end | ||
|cluster_id=chr10:49813077..49813087,- | |||
|coexpression_cluster_id=C2062 | |coexpression_cluster_id=C2062 | ||
|description=CAGE_peak_8_at_ARHGAP22_5end | |description=CAGE_peak_8_at_ARHGAP22_5end | ||
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|ontology_enrichment_celltype=CL:0000055!2.43e-23!180;CL:0000359!6.24e-22!32;CL:0000680!6.42e-20!57;CL:0000056!6.42e-20!57;CL:0000355!6.42e-20!57;CL:0000192!2.02e-18!42;CL:0000514!2.02e-18!42;CL:0000187!3.59e-17!54;CL:0000183!7.43e-17!59;CL:0000222!3.93e-15!119;CL:0000393!2.88e-14!60;CL:0000211!2.88e-14!60;CL:0002539!6.40e-13!10;CL:0000057!1.45e-11!75;CL:0002371!8.64e-11!591;CL:0000048!1.14e-10!430;CL:0000723!4.61e-10!436;CL:0002620!1.27e-09!23;CL:0000034!2.72e-09!444;CL:0000144!5.83e-09!625;CL:0002551!2.04e-07!6;CL:0002540!2.64e-07!6;CL:0000071!4.78e-07!18;CL:0002546!4.78e-07!18;CL:0002595!7.48e-07!5 | |ontology_enrichment_celltype=CL:0000055!2.43e-23!180;CL:0000359!6.24e-22!32;CL:0000680!6.42e-20!57;CL:0000056!6.42e-20!57;CL:0000355!6.42e-20!57;CL:0000192!2.02e-18!42;CL:0000514!2.02e-18!42;CL:0000187!3.59e-17!54;CL:0000183!7.43e-17!59;CL:0000222!3.93e-15!119;CL:0000393!2.88e-14!60;CL:0000211!2.88e-14!60;CL:0002539!6.40e-13!10;CL:0000057!1.45e-11!75;CL:0002371!8.64e-11!591;CL:0000048!1.14e-10!430;CL:0000723!4.61e-10!436;CL:0002620!1.27e-09!23;CL:0000034!2.72e-09!444;CL:0000144!5.83e-09!625;CL:0002551!2.04e-07!6;CL:0002540!2.64e-07!6;CL:0000071!4.78e-07!18;CL:0002546!4.78e-07!18;CL:0002595!7.48e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.80e-46;32!CL:0002539;7.27e-32;10!CL:0000192;3.99e-30;43!CL:0000187;8.44e-18;55!CL:0000056;2.08e-13;4!CL:0000393;1.26e-11;61!CL:0000211;1.26e-11;61!CL:0002595;7.82e-11;5!CL:0000515;9.20e-11;3!CL:0002592;9.20e-11;3!CL:0002582;5.13e-10;3!CL:0002540;1.16e-08;6!CL:0002594;4.81e-08;4!CL:0002593;1.05e-07;2!CL:0000680;1.15e-07;7!CL:0002583;2.41e-07;2!CL:0002589;2.41e-07;2 | |ontology_enrichment_celltype_v019=CL:0000359;1.80e-46;32!CL:0002539;7.27e-32;10!CL:0000192;3.99e-30;43!CL:0000187;8.44e-18;55!CL:0000056;2.08e-13;4!CL:0000393;1.26e-11;61!CL:0000211;1.26e-11;61!CL:0002595;7.82e-11;5!CL:0000515;9.20e-11;3!CL:0002592;9.20e-11;3!CL:0002582;5.13e-10;3!CL:0002540;1.16e-08;6!CL:0002594;4.81e-08;4!CL:0002593;1.05e-07;2!CL:0000680;1.15e-07;7!CL:0002583;2.41e-07;2!CL:0002589;2.41e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,5.72e-49,32;CL:0000192,3.53e-41,43;CL:0000514,3.53e-41,43;CL:0000680,4.96e-40,58;CL:0000056,4.96e-40,58;CL:0000355,4.96e-40,58;CL:0000187,2.33e-33,55;CL:0002539,1.25e-31,10;CL:0000393,2.21e-29,61;CL:0000211,2.21e-29,61;CL:0000222,2.28e-19,121;CL:0000515,1.62e-13,4;CL:0000048,3.81e-11,427;CL:0002595,6.41e-11,5;CL:0002592,6.77e-11,3;CL:0000723,8.13e-11,433;CL:0000034,2.16e-10,441;CL:0002582,8.00e-10,3;CL:0002540,8.46e-09,6;CL:0002594,3.28e-08,4;CL:0002321,9.64e-08,250;CL:0002593,1.33e-07,2;CL:0002583,1.51e-07,2;CL:0002589,1.62e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000514;3.99e-30;43!CL:0000355;5.15e-20;58!CL:0000515;2.08e-13;4 | |ontology_enrichment_development_v019=CL:0000514;3.99e-30;43!CL:0000355;5.15e-20;58!CL:0000515;2.08e-13;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;5.80e-11;3!DOID:127;5.80e-11;3!DOID:0060072;2.59e-08;4 | |ontology_enrichment_disease_v019=DOID:0060084;5.80e-11;3!DOID:127;5.80e-11;3!DOID:0060072;2.59e-08;4 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.55e-11,3;DOID:127,4.55e-11,3;DOID:0060072,2.17e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.47e-28!83;UBERON:0002329!1.47e-28!83;UBERON:0003077!1.47e-28!83;UBERON:0003059!1.47e-28!83;UBERON:0007282!1.47e-28!83;UBERON:0009618!1.47e-28!83;UBERON:0007285!1.47e-28!83;UBERON:0001637!1.70e-28!42;UBERON:0003509!1.70e-28!42;UBERON:0004572!1.70e-28!42;UBERON:0001981!4.50e-27!60;UBERON:0007500!4.50e-27!60;UBERON:0004537!4.50e-27!60;UBERON:0006965!4.50e-27!60;UBERON:0000055!5.62e-24!69;UBERON:0004290!1.03e-23!70;UBERON:0004573!1.09e-22!33;UBERON:0004571!1.09e-22!33;UBERON:0000486!8.85e-22!82;UBERON:0002049!6.46e-20!79;UBERON:0007798!6.46e-20!79;UBERON:0004872!7.71e-19!84;UBERON:0001134!9.87e-18!61;UBERON:0002036!9.87e-18!61;UBERON:0003082!9.87e-18!61;UBERON:0002385!9.44e-17!63;UBERON:0001015!9.44e-17!63;UBERON:0000383!9.44e-17!63;UBERON:0000947!2.81e-14!21;UBERON:0010191!2.81e-14!21;UBERON:0005256!1.92e-13!143;UBERON:0004237!6.40e-13!10;UBERON:0004695!6.40e-13!10;UBERON:0002111!6.40e-13!10;UBERON:0004178!6.40e-13!10;UBERON:0004535!6.65e-13!110;UBERON:0001009!8.95e-13!113;UBERON:0003914!1.41e-12!118;UBERON:0000490!6.21e-11!138;UBERON:0002204!6.13e-10!167;UBERON:0001135!8.45e-09!15;UBERON:0002067!3.93e-08!9;UBERON:0004016!3.93e-08!9;UBERON:0010083!3.93e-08!9;UBERON:0002199!5.73e-08!45;UBERON:0002416!5.73e-08!45;UBERON:0001986!4.78e-07!18;UBERON:0004638!4.78e-07!18;UBERON:0004852!4.78e-07!18;UBERON:0003834!7.48e-07!5;UBERON:0001533!7.48e-07!5;UBERON:0000119!8.83e-07!312;UBERON:0000467!8.85e-07!625 | |ontology_enrichment_uberon=UBERON:0000914!1.47e-28!83;UBERON:0002329!1.47e-28!83;UBERON:0003077!1.47e-28!83;UBERON:0003059!1.47e-28!83;UBERON:0007282!1.47e-28!83;UBERON:0009618!1.47e-28!83;UBERON:0007285!1.47e-28!83;UBERON:0001637!1.70e-28!42;UBERON:0003509!1.70e-28!42;UBERON:0004572!1.70e-28!42;UBERON:0001981!4.50e-27!60;UBERON:0007500!4.50e-27!60;UBERON:0004537!4.50e-27!60;UBERON:0006965!4.50e-27!60;UBERON:0000055!5.62e-24!69;UBERON:0004290!1.03e-23!70;UBERON:0004573!1.09e-22!33;UBERON:0004571!1.09e-22!33;UBERON:0000486!8.85e-22!82;UBERON:0002049!6.46e-20!79;UBERON:0007798!6.46e-20!79;UBERON:0004872!7.71e-19!84;UBERON:0001134!9.87e-18!61;UBERON:0002036!9.87e-18!61;UBERON:0003082!9.87e-18!61;UBERON:0002385!9.44e-17!63;UBERON:0001015!9.44e-17!63;UBERON:0000383!9.44e-17!63;UBERON:0000947!2.81e-14!21;UBERON:0010191!2.81e-14!21;UBERON:0005256!1.92e-13!143;UBERON:0004237!6.40e-13!10;UBERON:0004695!6.40e-13!10;UBERON:0002111!6.40e-13!10;UBERON:0004178!6.40e-13!10;UBERON:0004535!6.65e-13!110;UBERON:0001009!8.95e-13!113;UBERON:0003914!1.41e-12!118;UBERON:0000490!6.21e-11!138;UBERON:0002204!6.13e-10!167;UBERON:0001135!8.45e-09!15;UBERON:0002067!3.93e-08!9;UBERON:0004016!3.93e-08!9;UBERON:0010083!3.93e-08!9;UBERON:0002199!5.73e-08!45;UBERON:0002416!5.73e-08!45;UBERON:0001986!4.78e-07!18;UBERON:0004638!4.78e-07!18;UBERON:0004852!4.78e-07!18;UBERON:0003834!7.48e-07!5;UBERON:0001533!7.48e-07!5;UBERON:0000119!8.83e-07!312;UBERON:0000467!8.85e-07!625 | ||
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| ||
|short_description=p8@ARHGAP22 | |short_description=p8@ARHGAP22 | ||
}} | }} |
Latest revision as of 09:11, 18 September 2015
Short description: | p8@ARHGAP22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ARHGAP22_5end |
Coexpression cluster: | C2062_Myoblast_mesenchymal_Smooth_leiomyoma_Preadipocyte_Aortic_Fibroblast |
Association with transcript: | 45bp_to_ENST00000471013_5end |
EntrezGene: | ARHGAP22 |
HGNC: | 30320 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 5.72e-49 | 32 |
smooth muscle cell | 3.53e-41 | 43 |
smooth muscle myoblast | 3.53e-41 | 43 |
muscle precursor cell | 4.96e-40 | 58 |
myoblast | 4.96e-40 | 58 |
multi-potent skeletal muscle stem cell | 4.96e-40 | 58 |
muscle cell | 2.33e-33 | 55 |
aortic smooth muscle cell | 1.25e-31 | 10 |
electrically responsive cell | 2.21e-29 | 61 |
electrically active cell | 2.21e-29 | 61 |
mesodermal cell | 2.28e-19 | 121 |
skeletal muscle myoblast | 1.62e-13 | 4 |
multi fate stem cell | 3.81e-11 | 427 |
smooth muscle cell of the subclavian artery | 6.41e-11 | 5 |
smooth muscle cell of the coronary artery | 6.77e-11 | 3 |
somatic stem cell | 8.13e-11 | 433 |
stem cell | 2.16e-10 | 441 |
visceral preadipocyte | 8.00e-10 | 3 |
mesenchymal stem cell of the bone marrow | 8.46e-09 | 6 |
smooth muscle cell of the umbilical artery | 3.28e-08 | 4 |
embryonic cell | 9.64e-08 | 250 |
smooth muscle cell of the internal thoracic artery | 1.33e-07 | 2 |
subcutaneous preadipocyte | 1.51e-07 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 1.62e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.55e-11 | 3 |
leiomyoma | 4.55e-11 | 3 |
benign neoplasm | 2.17e-08 | 4 |