FFCP PHASE1:Hg19::chr10:49813077..49813087,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58504 | |EntrezGene=58504 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30320 | |HGNC=30320 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=45bp_to_ENST00000471013_5end | |association_with_transcript=45bp_to_ENST00000471013_5end | ||
|cluster_id=chr10:49813077..49813087,- | |||
|coexpression_cluster_id=C2062 | |||
|description=CAGE_peak_8_at_ARHGAP22_5end | |description=CAGE_peak_8_at_ARHGAP22_5end | ||
|id=chr10:49813077..49813087,- | |id=chr10:49813077..49813087,- | ||
|ontology_enrichment_celltype=CL:0000055!2.43e-23!180;CL:0000359!6.24e-22!32;CL:0000680!6.42e-20!57;CL:0000056!6.42e-20!57;CL:0000355!6.42e-20!57;CL:0000192!2.02e-18!42;CL:0000514!2.02e-18!42;CL:0000187!3.59e-17!54;CL:0000183!7.43e-17!59;CL:0000222!3.93e-15!119;CL:0000393!2.88e-14!60;CL:0000211!2.88e-14!60;CL:0002539!6.40e-13!10;CL:0000057!1.45e-11!75;CL:0002371!8.64e-11!591;CL:0000048!1.14e-10!430;CL:0000723!4.61e-10!436;CL:0002620!1.27e-09!23;CL:0000034!2.72e-09!444;CL:0000144!5.83e-09!625;CL:0002551!2.04e-07!6;CL:0002540!2.64e-07!6;CL:0000071!4.78e-07!18;CL:0002546!4.78e-07!18;CL:0002595!7.48e-07!5 | |ontology_enrichment_celltype=CL:0000055!2.43e-23!180;CL:0000359!6.24e-22!32;CL:0000680!6.42e-20!57;CL:0000056!6.42e-20!57;CL:0000355!6.42e-20!57;CL:0000192!2.02e-18!42;CL:0000514!2.02e-18!42;CL:0000187!3.59e-17!54;CL:0000183!7.43e-17!59;CL:0000222!3.93e-15!119;CL:0000393!2.88e-14!60;CL:0000211!2.88e-14!60;CL:0002539!6.40e-13!10;CL:0000057!1.45e-11!75;CL:0002371!8.64e-11!591;CL:0000048!1.14e-10!430;CL:0000723!4.61e-10!436;CL:0002620!1.27e-09!23;CL:0000034!2.72e-09!444;CL:0000144!5.83e-09!625;CL:0002551!2.04e-07!6;CL:0002540!2.64e-07!6;CL:0000071!4.78e-07!18;CL:0002546!4.78e-07!18;CL:0002595!7.48e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.80e-46;32!CL:0002539;7.27e-32;10!CL:0000192;3.99e-30;43!CL:0000187;8.44e-18;55!CL:0000056;2.08e-13;4!CL:0000393;1.26e-11;61!CL:0000211;1.26e-11;61!CL:0002595;7.82e-11;5!CL:0000515;9.20e-11;3!CL:0002592;9.20e-11;3!CL:0002582;5.13e-10;3!CL:0002540;1.16e-08;6!CL:0002594;4.81e-08;4!CL:0002593;1.05e-07;2!CL:0000680;1.15e-07;7!CL:0002583;2.41e-07;2!CL:0002589;2.41e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,5.72e-49,32;CL:0000192,3.53e-41,43;CL:0000514,3.53e-41,43;CL:0000680,4.96e-40,58;CL:0000056,4.96e-40,58;CL:0000355,4.96e-40,58;CL:0000187,2.33e-33,55;CL:0002539,1.25e-31,10;CL:0000393,2.21e-29,61;CL:0000211,2.21e-29,61;CL:0000222,2.28e-19,121;CL:0000515,1.62e-13,4;CL:0000048,3.81e-11,427;CL:0002595,6.41e-11,5;CL:0002592,6.77e-11,3;CL:0000723,8.13e-11,433;CL:0000034,2.16e-10,441;CL:0002582,8.00e-10,3;CL:0002540,8.46e-09,6;CL:0002594,3.28e-08,4;CL:0002321,9.64e-08,250;CL:0002593,1.33e-07,2;CL:0002583,1.51e-07,2;CL:0002589,1.62e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000514;3.99e-30;43!CL:0000355;5.15e-20;58!CL:0000515;2.08e-13;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;5.80e-11;3!DOID:127;5.80e-11;3!DOID:0060072;2.59e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.55e-11,3;DOID:127,4.55e-11,3;DOID:0060072,2.17e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.47e-28!83;UBERON:0002329!1.47e-28!83;UBERON:0003077!1.47e-28!83;UBERON:0003059!1.47e-28!83;UBERON:0007282!1.47e-28!83;UBERON:0009618!1.47e-28!83;UBERON:0007285!1.47e-28!83;UBERON:0001637!1.70e-28!42;UBERON:0003509!1.70e-28!42;UBERON:0004572!1.70e-28!42;UBERON:0001981!4.50e-27!60;UBERON:0007500!4.50e-27!60;UBERON:0004537!4.50e-27!60;UBERON:0006965!4.50e-27!60;UBERON:0000055!5.62e-24!69;UBERON:0004290!1.03e-23!70;UBERON:0004573!1.09e-22!33;UBERON:0004571!1.09e-22!33;UBERON:0000486!8.85e-22!82;UBERON:0002049!6.46e-20!79;UBERON:0007798!6.46e-20!79;UBERON:0004872!7.71e-19!84;UBERON:0001134!9.87e-18!61;UBERON:0002036!9.87e-18!61;UBERON:0003082!9.87e-18!61;UBERON:0002385!9.44e-17!63;UBERON:0001015!9.44e-17!63;UBERON:0000383!9.44e-17!63;UBERON:0000947!2.81e-14!21;UBERON:0010191!2.81e-14!21;UBERON:0005256!1.92e-13!143;UBERON:0004237!6.40e-13!10;UBERON:0004695!6.40e-13!10;UBERON:0002111!6.40e-13!10;UBERON:0004178!6.40e-13!10;UBERON:0004535!6.65e-13!110;UBERON:0001009!8.95e-13!113;UBERON:0003914!1.41e-12!118;UBERON:0000490!6.21e-11!138;UBERON:0002204!6.13e-10!167;UBERON:0001135!8.45e-09!15;UBERON:0002067!3.93e-08!9;UBERON:0004016!3.93e-08!9;UBERON:0010083!3.93e-08!9;UBERON:0002199!5.73e-08!45;UBERON:0002416!5.73e-08!45;UBERON:0001986!4.78e-07!18;UBERON:0004638!4.78e-07!18;UBERON:0004852!4.78e-07!18;UBERON:0003834!7.48e-07!5;UBERON:0001533!7.48e-07!5;UBERON:0000119!8.83e-07!312;UBERON:0000467!8.85e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.18e-34;33!UBERON:0004571;1.18e-34;33!UBERON:0004237;7.27e-32;10!UBERON:0004695;7.27e-32;10!UBERON:0002111;7.27e-32;10!UBERON:0004178;7.27e-32;10!UBERON:0001637;8.14e-26;42!UBERON:0003509;8.14e-26;42!UBERON:0004572;8.14e-26;42!UBERON:0001135;1.65e-20;15!UBERON:0000947;3.26e-20;21!UBERON:0010191;3.26e-20;21!UBERON:0002385;3.94e-17;31!UBERON:0001015;3.94e-17;31!UBERON:0000383;3.94e-17;31!UBERON:0007500;8.95e-14;56!UBERON:0001981;8.95e-14;56!UBERON:0004537;8.95e-14;56!UBERON:0003834;7.82e-11;5!UBERON:0001533;7.82e-11;5!UBERON:0003498;9.20e-11;3!UBERON:0005985;9.20e-11;3!UBERON:0001621;9.20e-11;3!UBERON:0000055;9.51e-11;65!UBERON:0003914;4.90e-10;74!UBERON:0002049;2.29e-09;75!UBERON:0007798;2.29e-09;75!UBERON:0002067;1.45e-08;9!UBERON:0001310;4.81e-08;4!UBERON:0003513;9.80e-08;7!UBERON:0002456;1.05e-07;2!UBERON:0001529;2.41e-07;2!UBERON:0007204;2.41e-07;2!UBERON:0002204;8.08e-07;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,1.58e-44,71;UBERON:0003059,1.58e-44,71;UBERON:0007282,1.58e-44,71;UBERON:0004290,1.58e-44,71;UBERON:0009618,1.58e-44,71;UBERON:0003077,8.78e-44,72;UBERON:0007285,8.78e-44,72;UBERON:0007524,4.66e-43,73;UBERON:0007503,1.03e-39,78;UBERON:0001637,2.43e-39,42;UBERON:0003509,2.43e-39,42;UBERON:0004572,2.43e-39,42;UBERON:0004573,6.03e-39,33;UBERON:0004571,6.03e-39,33;UBERON:0001134,6.16e-37,62;UBERON:0002036,6.16e-37,62;UBERON:0003082,6.16e-37,62;UBERON:0000486,8.95e-37,83;UBERON:0002385,1.55e-35,64;UBERON:0001015,1.55e-35,64;UBERON:0000383,1.55e-35,64;UBERON:0004237,1.25e-31,10;UBERON:0004695,1.25e-31,10;UBERON:0002111,1.25e-31,10;UBERON:0004178,1.25e-31,10;UBERON:0007500,7.18e-31,59;UBERON:0001981,7.18e-31,59;UBERON:0004537,7.18e-31,59;UBERON:0006965,7.18e-31,59;UBERON:0000055,7.50e-26,68;UBERON:0005256,3.72e-22,122;UBERON:0004872,9.61e-22,83;UBERON:0002049,1.21e-21,78;UBERON:0007798,1.21e-21,78;UBERON:0001135,2.33e-20,15;UBERON:0000947,4.83e-20,21;UBERON:0010191,4.83e-20,21;UBERON:0000490,2.49e-19,148;UBERON:0002204,7.33e-16,167;UBERON:0000926,6.70e-15,315;UBERON:0004120,6.70e-15,315;UBERON:0006603,6.70e-15,315;UBERON:0004535,7.04e-15,109;UBERON:0003104,7.79e-15,160;UBERON:0009142,7.79e-15,160;UBERON:0001009,2.69e-14,112;UBERON:0003914,2.15e-13,117;UBERON:0003834,6.41e-11,5;UBERON:0001533,6.41e-11,5;UBERON:0001621,6.77e-11,3;UBERON:0002100,2.68e-10,199;UBERON:0002067,1.03e-08,9;UBERON:0004016,1.03e-08,9;UBERON:0010083,1.03e-08,9;UBERON:0003081,3.04e-08,203;UBERON:0001310,3.28e-08,4;UBERON:0003513,8.53e-08,7;UBERON:0002456,1.33e-07,2;UBERON:0001529,1.62e-07,2;UBERON:0007204,1.62e-07,2 | |||
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| ||
|short_description=p8@ARHGAP22 | |short_description=p8@ARHGAP22 | ||
}} | }} |
Latest revision as of 09:11, 18 September 2015
Short description: | p8@ARHGAP22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ARHGAP22_5end |
Coexpression cluster: | C2062_Myoblast_mesenchymal_Smooth_leiomyoma_Preadipocyte_Aortic_Fibroblast |
Association with transcript: | 45bp_to_ENST00000471013_5end |
EntrezGene: | ARHGAP22 |
HGNC: | 30320 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 5.72e-49 | 32 |
smooth muscle cell | 3.53e-41 | 43 |
smooth muscle myoblast | 3.53e-41 | 43 |
muscle precursor cell | 4.96e-40 | 58 |
myoblast | 4.96e-40 | 58 |
multi-potent skeletal muscle stem cell | 4.96e-40 | 58 |
muscle cell | 2.33e-33 | 55 |
aortic smooth muscle cell | 1.25e-31 | 10 |
electrically responsive cell | 2.21e-29 | 61 |
electrically active cell | 2.21e-29 | 61 |
mesodermal cell | 2.28e-19 | 121 |
skeletal muscle myoblast | 1.62e-13 | 4 |
multi fate stem cell | 3.81e-11 | 427 |
smooth muscle cell of the subclavian artery | 6.41e-11 | 5 |
smooth muscle cell of the coronary artery | 6.77e-11 | 3 |
somatic stem cell | 8.13e-11 | 433 |
stem cell | 2.16e-10 | 441 |
visceral preadipocyte | 8.00e-10 | 3 |
mesenchymal stem cell of the bone marrow | 8.46e-09 | 6 |
smooth muscle cell of the umbilical artery | 3.28e-08 | 4 |
embryonic cell | 9.64e-08 | 250 |
smooth muscle cell of the internal thoracic artery | 1.33e-07 | 2 |
subcutaneous preadipocyte | 1.51e-07 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 1.62e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.55e-11 | 3 |
leiomyoma | 4.55e-11 | 3 |
benign neoplasm | 2.17e-08 | 4 |